Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139390585
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Entry
139390585 CDS
T10872
Name
(RefSeq) protocadherin gamma-C5-like isoform X1
KO
K16497
protocadherin gamma subfamily C
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
Cell adhesion molecules [BR:
ocla04515
]
Cadherins
Protocadherins
139390585
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139390585
NCBI-ProteinID:
XP_070993901
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Position
31:complement(26408376..26467842)
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AA seq
975 aa
AA seq
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MESRQRKHCGGWPVLRLWFSLACLMGATAHLSYSVSEELSPGAVVGNIVKDLGLTVQMII
QRKLRVVSESNAQYFEVNQATGDFIIRQTIDREHMCELSATCSLHVEIVLEDPLAIHRVL
VDIVDVNDNAPQFSTNNISLEISEAAAPGTRFRLESAHDPDVGINSLRTYHLASNDRFVL
NVETKSDGDKFPELVLVKALDRETQASFRLLLTALDGGQPEKSGSTLLLITILDVNDNAP
VFDMSIKKVSVLENVEKGTLVTKLNATDGDYAQNGEISFLFSKYTPDRVLKLFSVDSKTG
EVRVNGHVDYETANEYYVTVLARDGGTPPMEASCNIKVEVTDVNDNSPEVMLTSLTSPIQ
EDAALGTVIALISARDLDSGKNGKVTLKVQSGLPFKLNSAFGEHYNLITDGNMDRETMAD
YTVVIMATDAGSPPLSSCTTFVVKLSDVNDNAPSFSQASYSVDVPENNAPSTPIAMVVAS
DPDIGENARVSFSILPSMVQGSHISSYVYINPETGHIYSMHSLDHETLSAFRIEVQARDA
GATPMTTNVTVHVFVVDLNDNAPLIVYPPFPQDTGLQLSVPLSAGPGHLINKLVGVDPDS
GHNAWLFYSIAPGPHAALFLITPHTGELRTTRKLAEEEGGSAYDITVVVQDNGEPTLSTT
VAITVTVEEKGASDAAMDNQKTSGMRQTGMSDITLYLIISLACVSAMSFLTFFIIMVRCL
RHRSDHGGTGCCYSHYRPSRAYHQRPHKDLHLQLNTDGPIRYMEVVGGAQDPPGTRTYRP
CYSTTSSRSDFMFVKTPMMSHNNTLSMTLNRKHLMDSANEQKPPNADWRFTQGQRPGPSG
AGGPPEMAMGTGPWPNPPTEAEQLQALMAAANEVSEATATLGPGTMGLSTRYSPQFTLQH
VPDYRQNVYIPGSTATLTSNPQQQQQQQQMLMQQQMAAQQQALQAQPSEASAQPEPPKAA
QTPASKKKSTKKEKK
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atggaatccagacagaggaagcactgcggagggtggcccgtgctgaggctatggttttcc
ctggcttgcctcatgggcgcgaccgcccatcttagttactcggtgtcagaagagctcagt
ccgggggctgtggtcgggaatatcgttaaagatttgggtctcaccgttcaaatgataatt
cagagaaaattgcgggtggtctcggaatctaacgcgcagtacttcgaggtgaaccaggcg
actggggattttattattagacagacaattgacagggaacacatgtgcgaattaagtgca
acatgttcactgcatgttgagattgtactcgaggaccctttagcaatacatcgtgttctt
gtggatattgtggatgtaaatgacaatgcgccacagttttccactaataatatttccttg
gagatatcagaggcggccgcgccgggcacccggttccgactggaaagtgcgcacgatcca
gatgtgggtatcaactctctgcgtacgtatcacctcgcatccaacgaccgctttgttttg
aatgtggaaacgaaaagtgacggggataagttcccggagttagttttagtgaaggctttg
gatagggagacgcaggcctcgtttcgcctgttgcttactgccctagacgggggacagcca
gagaagtctggctccactcttctactcattacaattctggacgtcaatgacaacgcgccc
gtctttgacatgtcgattaaaaaagttagcgtgttggagaatgttgaaaagggcacttta
gtaacgaaactgaacgcaaccgacggggattatgctcagaacggggagatctccttcctg
tttagtaaatacacgccggaccgggtgctcaagctattcagcgtggattcgaaaaccggt
gaggtccgtgtgaatggtcacgtggattacgaaacagctaatgagtattacgtcactgtg
ctggccagggatgggggaaccccccccatggaagcatcctgtaacatcaaagttgaagtc
actgacgtgaatgataactctccggaggtgatgttgacgtcactgaccagtcctatccag
gaggacgcagcactgggcacagttatcgccctcatcagcgcaagggacctcgactctggt
aagaacggcaaggtaacattaaaggtccagtctggtctgcccttcaaactcaactccgcc
tttggagagcactacaacctcatcaccgacggcaacatggacagagagaccatggctgat
tacactgtggtcatcatggcgaccgacgctggatcccctcccctgtcgtcatgtacgacc
ttcgtggtcaagctgtcagacgtgaatgacaacgctccgtcattctcccaggcctcttac
tcagtggacgtccccgagaacaacgcccccagcacccctatcgccatggtggtggcctct
gacccggacataggggaaaatgcccgcgtctccttttccatcctgcccagcatggtccag
ggctcacacatctcctcctatgtctacatcaacccagagactggccacatctatagcatg
cactccctggaccatgaaaccctcagcgccttccgcattgaggtacaggctcgagacgcc
ggggcgacacctatgaccaccaacgtcaccgtgcatgtattcgtagtagatcttaacgac
aatgctcccctcatcgtgtatccccccttcccccaggatacggggctgcagctcagtgta
ccgctgtcggctgggccagggcatctcattaataaactggttggggtggatcccgatagc
ggtcataacgcctggttgttttactccatcgcccccgggcctcacgctgctctgttcctc
atcaccccgcacaccggcgagctccgcaccactcgcaagctagccgaggaggagggtggc
tccgcctatgacatcactgtggtcgtccaggacaacggcgaacctactctctccaccact
gtggccattacggtaacagtggaggagaagggtgccagtgacgccgccatggacaaccag
aagacgtcggggatgcggcagactgggatgtctgacatcaccctgtacctcatcatctca
ctggcctgcgtctcggccatgtccttcctcaccttcttcatcatcatggtccgatgcctc
cgccaccgcagcgaccatggagggacaggctgctgctacagccattaccggcccagcagg
gcctaccatcagaggccccacaaggacctccacctgcagctcaacacagacggacccatc
cgttacatggaggtggtgggaggggctcaagaccccccaggaacacggacctacagaccc
tgctactccaccacctccagccgcagtgactttatgtttgttaagacacccatgatgagc
cataacaacacactcagtatgacgctcaacaggaagcacctaatggactcagccaatgag
caaaagcctcctaacgccgattggcgcttcacccaaggccagagacctggacccagtgga
gctggaggcccccctgaaatggccatgggaaccggaccctggcccaacccccccaccgag
gctgagcagctccaagccctgatggccgccgccaacgaagtgagcgaagcgaccgccacc
ctgggaccaggcaccatgggtctaagcacccgttacagtccccagttcaccctgcagcac
gtgcccgactaccgtcagaacgtctacatccctggcagcacggccaccctgacctccaat
ccccagcagcagcagcagcaacagcagatgctgatgcagcagcagatggcagcccaacaa
caggccctgcaggcccagccctccgaggcctcggctcagcctgaaccccccaaggctgcc
cagacccccgcctccaagaagaagtccaccaagaaagagaagaagtag
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