Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139390642
Help
Entry
139390642 CDS
T10872
Name
(RefSeq) hyaluronan mediated motility receptor-like isoform X1
KO
K06267
hyaluronan-mediated motility receptor
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
139390642
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
ocla04090
]
139390642
00536 Glycosaminoglycan binding proteins [BR:
ocla00536
]
139390642
CD molecules [BR:
ocla04090
]
Proteins
139390642
Glycosaminoglycan binding proteins [BR:
ocla00536
]
Hyaluronan
Cell surface receptors
139390642
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMMR_N
HMMR_C
FKBP15
CCDC39
CCDC18_1st
NOCA1_mid
ACF4_like
CCDC110
YabA
CopK
Motif
Other DBs
NCBI-GeneID:
139390642
NCBI-ProteinID:
XP_070994003
LinkDB
All DBs
Position
31:complement(15101945..15131864)
Genome browser
AA seq
1074 aa
AA seq
DB search
MSFSRAPVKRFNENIGCAPAPGTYELKPGEVKGPASFHRSERFKLLKASGAPFIPPPSPS
KDVPMSPVAVRRTMSVDGLVDGSMSKKDKSGQSMQMKQQKLLEKEIRSLVQQRGEQDRRL
VTLEEELRKVEAKLLSAVREKTGLAANVTTLERQLAELKKTNEFLKNKVSADTTKKRIQS
LSMELMEARNKLDINDKELSFLQISTEGQVKLLETDLEAARATLTALRERNKDLEDLHHD
TKVQNEELENDMDTLQAVIQELREEVNVLQGYLDTANDHIQDLRMKLHGKTEMVNSISES
QQEKLGHLEQKLEQCTAELENSQNTLRQKEEESEKGQQDLQASRDALQETEKLLERREAE
LMSSQKALGEMEVQMQRANQEVSDSQIAVRQQEAELVRLREVLRRTGEELDEKVAHLEEK
CKVLEEESVSSQRRVEELKAELSLLRENRRSEEEVQEQLEQTHTSLAEELKQEKEHAASL
ASVLERVREETEEERKQLEDELEEALGVLSVLELQDEQRGEALQGLQQERTELERELTET
RALLVRRSSDVQVVHSTMRSLQEEHTTSLSKIGDLATELESSRQALKGAEERGRALEEEV
ERVTKQMKEEMERVNQRKEVEVKKVREEMEGEQEKHLADQQAQEKARAEYARMLLAAQTR
LAQRDEEMKRAEEVQRQLQEERMEKEEVQRLLEQEKGEREVQRRDLKQCMSGEVGRLERQ
VEVLEEEKLALQRLVGEVEREKLSLHNQLEKMEDQVKKDLPCLENHMEVEKERDELKTVV
EMFEIDKRVLQDQVELIHNRLIKAEEQRASLQSQLELMEEKVSLQSQVDPVVQDKVSLQS
QVDPVVQEKVTLQSQVDMVVKEVVSLQSQVDLVVQEKVTLQSQVDVVVKEVVSLQSQVDP
VVKEVVSLQSQVDPVVQEKVTLQWEMEEQRRDFQRQLVATRDKSDAETEHWRRQYEELYT
KVKPFQEQLNGFAAERDALLNENGANQEELTRLADAYARLLGHQNQKQKIRHVVKLKDEN
VSLKQELSKLRAQVSRQKGGQSQRRVDPIKALNHLDSKENEQPAAAPLRPGNRC
NT seq
3225 nt
NT seq
+upstream
nt +downstream
nt
atgtctttttcaagagctccagtgaaacgatttaatgaaaatatcggctgcgccccagca
ccgggcacatacgagctgaaaccaggagaggtgaagggacctgcctctttccaccggtca
gagcgcttcaaactgctcaaagctagtggtgctcctttcatcccaccaccatctccttct
aaagatgttcccatgtcacctgtggctgtgcgtaggaccatgtctgtggatggcctggtt
gatgggtccatgtcaaagaaagacaagagcggccaatcgatgcagatgaaacagcagaaa
ctcctggagaaagagatccggtccctggtgcagcagcgcggggagcaggacaggcgcctt
gtaaccctggaggaggagctgaggaaggtggaggccaagctgttgtctgcggtcagggag
aagactggcctggcagctaacgtcaccaccctggagagacagctggctgagcttaagaag
actaacgagttcctcaagaacaaggtttctgcagacaccactaagaagaggatccaatct
ctgtctatggagctgatggaggccagaaacaaattggacatcaatgacaaggagctgagt
ttcctccagatcagtacagagggccaggtgaagttgctggagacagacctggaggcagcc
agagctacactcactgccctgagggagaggaacaaggacctggaggacctccaccatgac
accaaagtccagaacgaggagctggagaatgatatggatacgctgcaagctgtgatccag
gagctgagagaggaggtcaatgttcttcagggttacttggacacagccaacgaccacatc
caggatctgcgtatgaagcttcatgggaagaccgagatggtgaacagcatctctgagtct
cagcaggagaaactgggccatcttgagcagaaacttgagcagtgcaccgcggagctcgaa
aactctcagaacactctccgtcagaaggaggaggagtcagagaaaggtcagcaggacctg
caggcttcccgtgatgctttgcaggagacggagaagcttctggagcggcgagaggcggag
ttgatgtcctcccagaaggcattgggggagatggaggtacagatgcaacgggccaaccag
gaagtgtctgactcccagattgcagtgcggcagcaagaggcggagctagtgcggctgcga
gaggtgctgaggaggacaggggaggagctggatgagaaagtagctcacctggaagagaag
tgcaaggtcctggaggaggagagcgttagtagccagaggagagtggaggagctgaaggca
gagctgagcctcctgcgggagaacaggaggagtgaggaggaggtgcaggagcagctggag
cagacacacacctccctggctgaggagctgaagcaggaaaaggagcatgcagcctccctg
gcctcagttctggagagggtgagggaggagacagaggaggaaaggaaacagttggaggat
gagttggaggaggctctaggagtgttgtcggttctggagttgcaggatgagcagagaggg
gaggccctacagggtctccaacaggagaggaccgagttggagagagagctgactgagacc
agagcactgctagtcaggaggagcagtgacgtgcaggtggtacactctaccatgaggagc
ctgcaggaggaacacaccacctccctcagcaagataggagacctggccactgaactggag
agctccaggcaggccctgaagggagcagaggagaggggtagagcgctggaggaagaggtg
gagagggtgacgaagcagatgaaagaagagatggagagagtgaatcagcgtaaagaggtg
gaggtgaagaaagtgagggaggagatggagggggagcaggagaaacatctagctgaccag
caggctcaggagaaagcaagagcggagtatgcaagaatgctgttggcggcacagactcgt
ctagctcagagagatgaggagatgaagagggctgaggaggtgcagagacagctgcaggag
gagaggatggagaaagaggaggttcaaaggctactggagcaggagaaaggagagagggag
gtgcaaaggagagacttgaagcaatgtatgtcaggggaggtggggaggctagagagacag
gtcgaggtgttagaggaggagaagctagctcttcagcgcttggtaggagaggtggaaagg
gagaaacttagccttcacaaccagttggagaagatggaggatcaggtaaagaaagatctg
ccctgtctagagaaccacatggaggtagagaaagagagggatgaactgaaaacggtagtg
gagatgtttgaaatagacaaacgagtccttcaggaccaggtagaactaatacacaaccga
ctgattaaggcagaagaacagagagcgagtctccagagccagttagaactgatggaagag
aaggtttctctccagagccaggtggacccagttgtccaggataaggtttctctccagagc
caggtggacccagttgtccaggagaaggtgactctccagagccaggtggacatggtggtc
aaggaggtggtttctctccagagccaggtggacctggttgtccaggagaaggtgactctc
cagagccaggtggatgtggtggtcaaggaggtggtttctctccagagccaggtggaccca
gtggtcaaggaggtggtttctctccagagccaggtggacccagttgtccaggagaaggtg
actctccagtgggagatggaggaacagagaagagacttccagagacagctggtggcaact
cgggacaagagtgatgcagagacagaacactggaggagacagtacgaggagctttacact
aaggtcaagcccttccaggaacagctgaatgggtttgctgcagaacgggacgcgctactg
aatgagaatggggcaaaccaggaggagctgacccggcttgcagacgcctacgctcgtctg
ctgggccaccagaaccagaaacagaagatcagacacgtggtgaagctcaaagatgagaac
gtctccctcaaacaggagctgtctaagctgcgtgcccaggtgtctcgtcagaagggaggc
cagtcccaacgcagggttgaccccatcaaagccttgaaccacctggacagtaaggagaac
gagcagcctgctgccgcacctctcagaccaggaaaccgctgttga
DBGET
integrated database retrieval system
