Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139391159
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Entry
139391159 CDS
T10872
Name
(RefSeq) vascular endothelial growth factor receptor kdr-like
KO
K05096
FMS-like tyrosine kinase 1 [EC:
2.7.10.1
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04010
MAPK signaling pathway
ocla04020
Calcium signaling pathway
ocla04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
139391159
04020 Calcium signaling pathway
139391159
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
139391159
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ocla01001
]
139391159
Enzymes [BR:
ocla01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
139391159
Protein kinases [BR:
ocla01001
]
Receptor tyrosine kinases (RTK)
VEGFR family [OT]
139391159
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Ig_VEGFR-1-like_5th
Ig_3
Pkinase
I-set
Ig_2
ig
VEGFR-2_TMD
VEGFR1-3_N_Ig-like
VEGFR-1-like_Ig-like
V-set
Ig_4
Haspin_kinase
Motif
Other DBs
NCBI-GeneID:
139391159
NCBI-ProteinID:
XP_070994821
LinkDB
All DBs
Position
31:29842732..29922971
Genome browser
AA seq
1306 aa
AA seq
DB search
MAPLNCAKLSVVFHLITTISGQVSLPAPLLLPSEDTHLLHTGNSLNLTCRGASQLHWRLP
WRNVTSEGVHVEECEPRTNAHCSKLLVRNLIPNDTGLYSCRYAQPSADISSTYVYVKDEK
HPFVEHHFRNPSTLFSYRHESTLVIPCRTTSPDQIVTLEAWPPLSKEVEQGKEWDPKVGF
KIPYGPYKFYHLLTCVTSVNGQRVQSKYIPLRTTILLRNVKINPRRIKLLVGDSLVLNCS
AETTFNGRINFTWEYPKRMVHRNPIINKSKEDPALVTSMYQAITLSNITMDNRGMYRCTA
DIGSAEMGNKKHASAKVTIYEHPYLNVSYKNERARRVVYTEGRNKLMFEPKVNALPPPDT
MTWYKDGVPINENSTCYESSGYNLFVKDVKQKDAGVFTIALGNKERGLYRNLSYTLIVQV
RPKISEEEVASEYVQPYMFGMQHQLTCTAFGVPMPNITWLWQPCHPDPTDKECTLYTEPI
PVQMDDKGNYSHNWIENIYNKNQLVKGKNKTVSTLVVGAAHISGIYSCVAENELGNCTLR
TIFYVDDHPQHLAIEPQTAIEGDDVTLTCRGTRYLYTDLQWYNPQNYTVTPANITALQLS
PYAISLSLSLHNVSRSHTTGYQCWAGNLHSKRVIVQTVLTVDERKRPWLRQNLTNQDVNS
SSTLTMACYALGMPPPYITWYKDKLPVQEGPGITLREDGVLTIERVKKDDEGLYECLASN
NEGSVKASAVVTVVGDEGKPNIEVIVLVCTGAAATFLWLMLILFIRKLRKPDYMMGPSII
IDPDECPLDEQCERLQYDGSKWEFPRDRLRLGKTLGHGAFGKVVEASAFGIDKLSTCKTV
AVKMLKGGATTNERKALMSELKILIHIGHHLNVVNLLGACTKPGGPLMMIVEYCKYGNLS
NYLRSKRADFIVYKSQDGKVVTSGSGCDLSELIKRRLESVASTGSSASSGFVEDKSYCDS
EEEEEEPEDLYKRVLTMEDLICYIFQVAKGMEFLASRKCIHRDLAARNILLSENNVVKIC
DFGLARDIYKDPDYIRKGDARLPLKWMAPEAIFDKIYTTQSDVWSFGVLMWEIFSLGASP
YPGLHIDEDFCCRLKEGTRMRAPEYSSSEIYQTMLDCWQAEPGDRPTFTELVERLGDLLQ
ASVQQEGKHYIPIAALLSKEGDPSNTALSEETNTRPLSYRDSGSTWNIKIRPASVKTFDE
VTMENGSNDNHEGSQSDSGMGLSSDDMNTLKRLESLARPLSIMALAMKAVSRSKESVLTE
GEKDKYLQPVSSLDFTLDDSSLEPGLECHSPPPDYSYVVRYSTPPV
NT seq
3921 nt
NT seq
+upstream
nt +downstream
nt
atggccccgctcaactgtgccaaactctcagtcgtctttcatttaatcacaactataagc
ggtcaggtcagccttccagcccctctgctgctgccctctgaggacacacaccttctacac
acagggaattcactcaacctcacctgcagaggtgcgtcccagctgcactggaggctgccc
tggcggaacgtcacctcggagggggttcatgtggaggagtgtgagccccggacgaacgcc
cactgtagtaagctgctggtgagaaacctgatccccaacgacacggggctctacagctgc
aggtacgcccagccctccgccgacatcagctctacctacgtatatgtcaaagatgaaaaa
catccgtttgtggagcaccatttccgcaatccatccaccctgtttagctacagacatgaa
tccaccctagtgattccctgtagaacaacttctcctgaccagatcgtcactcttgaagcg
tggccacccttatcaaaggaggttgaacaagggaaggaatgggaccccaaagtgggcttc
aagatcccatacggtccctacaaattctatcatctcctaacctgtgtcaccagcgtcaac
ggccaacgggtccagtccaaatacatccctctgaggactactatcttgctgaggaacgtg
aagatcaacccaagacgtatcaagctgttagtgggagatagcctggtcctcaactgctcc
gcagagaccaccttcaatggaaggatcaacttcacttgggaatacccaaagagaatggtc
catcggaaccctatcatcaacaagtccaaagaagatccggctttggtcaccagtatgtac
caagcaatcaccttgtccaacatcaccatggacaacaggggcatgtacaggtgcacggct
gatatagggagcgctgagatggggaacaagaagcacgcctcagccaaagtcaccatctac
gaacatccatacctgaatgtgtcctataagaatgaacgggccaggagagtggtctacacc
gagggtagaaacaagctgatgtttgaacccaaggtcaatgcactgccaccacccgacact
atgacatggtataaggatggcgtccccatcaacgagaactccacctgttacgagtcttca
ggctacaacctcttcgtcaaggacgtgaagcagaaggatgccggggtcttcaccatcgcc
ctgggcaacaaagagagaggcctctacaggaatctcagctacactctgatagtccaagtg
agaccaaagatctccgaagaggaggtggcctcggagtacgtgcagccctacatgttcggc
atgcagcaccagctaacctgcaccgcctttggagtgcccatgcccaacatcacgtggctc
tggcaaccatgccatcctgaccccaccgacaaagagtgtaccctttacactgagccaatc
ccggttcaaatggacgataaggggaactactcacacaactggattgagaacatatacaac
aaaaatcaactggtaaaagggaagaacaagactgtgagtacgctagtggtgggagcggct
cacatctcggggatctactcctgcgtggccgagaatgaacttggcaactgcacactgaga
accattttctatgtggacgatcaccctcagcacctggccatcgagccccagactgccatc
gagggtgatgacgtcactctgacttgtcgcgggactcggtacctgtacacagacctgcag
tggtacaaccctcagaactacactgtcacccccgccaacatcacggccctgcagctcagc
ccctacgctatctctctctccctctccctgcacaacgtgtccaggagtcacacaacaggc
taccagtgctgggcgggtaacctccacagcaagagggtcatagtccagactgtgctgact
gtggatgagaggaagaggccgtggctgagacagaacctgaccaatcaggatgtaaacagc
agcagtactctgactatggcctgctacgccctgggtatgccgccaccctacatcacctgg
tacaaagacaagctaccagtacaggagggtccaggtattactctgagggaggatggggtg
ctgacgatcgagagagtgaagaaagatgatgagggcttgtacgagtgtctggccagcaac
aatgaggggagtgtgaaagccagcgctgtcgtcactgtcgtgggtgatgaggggaagccc
aacattgaggtgatcgtcctggtgtgtacaggagctgctgccaccttcctctggctcatg
ctcatcctcttcatccgcaagctgaggaagccggactacatgatgggtccatccatcatc
atcgacccagacgagtgtcctttggacgagcagtgtgaacgcctgcagtacgatggcagc
aaatgggagtttccccgagaccgcctcagactgggcaaaactctgggccatggagccttc
gggaaagtggtggaggcctctgcttttgggattgacaagctctcgacctgcaagactgtg
gccgtcaaaatgctgaaaggaggagctacgacaaatgagcgcaaggctctgatgtcggag
ctgaagatcctgatccacattggtcatcatctgaacgtggtcaacctgctgggagcctgc
accaagcctggaggtccattgatgatgatagtggagtactgcaaatatggaaacttgtca
aactacttgagaagcaagagggctgatttcatcgtttataagagccaggacggtaaggtg
gtgacgtcggggtcgggctgtgacctaagcgagctcatcaagcggcgcctggagagcgtg
gccagcaccggaagctcggccagctccggctttgtggaagataagagctactgcgactca
gaggaagaggaggaagagccagaggatctgtacaagagagtgctgacaatggaagatttg
atttgctacattttccaagttgcaaaaggcatggagttcctggcttcacgcaagtgtatt
catcgtgatctggctgcaagaaacatcctactgtctgagaataatgttgtgaagatatgc
gattttggactggccagagacatctacaaagacccagactacattcgcaaaggagatgcc
agactgcccctcaagtggatggcgcccgaggccatttttgacaagatctacaccactcag
agcgatgtgtggtcctttggagttctgatgtgggagatcttctctctgggtgcctctccg
tatcccggcttacacatcgacgaggacttctgctgccgactgaaggaagggaccaggatg
agagctccggaatactcctcctctgaaatataccagaccatgttggactgctggcaggct
gagccaggagaccggccaaccttcactgaactggtggagagactaggagacctgctacag
gccagcgtacagcaggagggaaagcattacatccctatagcagccctgctgtctaaggag
ggagacccctccaacacggccctgtcagaggagaccaacaccaggccactctcttaccgc
gactcagggagcacctggaacattaagatccgtccagcaagtgtgaagacctttgatgag
gttaccatggagaacggttctaacgacaaccatgaggggagccagtcggacagtgggatg
ggcctgtcgtctgatgatatgaacaccctgaagcgcctggagtccttggcccgaccactc
agcatcatggccctggcgatgaaggcagtgagtaggagtaaggagtcggtgctgactgag
ggagagaaggacaagtaccttcagcctgtctcctctctggacttcaccctggatgactcg
tccctggagcccggtctggagtgccacagcccgccccctgactacagctatgtagtgcgc
tactccaccccacctgtgtag
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