Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139391242
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Entry
139391242 CDS
T10872
Name
(RefSeq) sequestosome-1
KO
K14381
sequestosome 1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04137
Mitophagy - animal
ocla04140
Autophagy - animal
ocla04217
Necroptosis
ocla04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
139391242
04137 Mitophagy - animal
139391242
09143 Cell growth and death
04217 Necroptosis
139391242
04218 Cellular senescence
139391242
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139391242
03029 Mitochondrial biogenesis [BR:
ocla03029
]
139391242
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ocla04147
]
139391242
Membrane trafficking [BR:
ocla04131
]
Autophagy
Mitophagy
Cargo receptors
139391242
Pexophagy
139391242
Aggrephagy
139391242
Xenophagy
139391242
ER-phagy
ER-phagy recepters
139391242
Other autophagy associated proteins
Midbophagy
139391242
Mitochondrial biogenesis [BR:
ocla03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
139391242
Exosome [BR:
ocla04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
139391242
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA_5
ZZ
PB1
Motif
Other DBs
NCBI-GeneID:
139391242
NCBI-ProteinID:
XP_070994991
LinkDB
All DBs
Position
31:35543729..35547927
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AA seq
469 aa
AA seq
DB search
MSMTVKAYLLGKEHMPKEIRRFAVDQDVSTSFEYLNRKVVDVFSTLRNVPYQMFYKDEDG
DMIAFSTDDELIMGLTCIKDDTFRLFIKEKKEHRREFPPFAFPGGVPPFAFPPHPGAPHM
GPPPPHGPPPHGHGPHGPPMVHPNVTCDECEGPVAGTRFKCTVCSNYDLCSPCQAKGLHK
EHVLLPIWHPFNNTFEWFPRGKWMRKMRHCMWAQAQSQAQPGPSGSQPGPSGSQPGQAAP
EDSQPSSDASSASSQQSQANMDYLKNIGEGVAAMLSPLGIDVDIDVEHEGKRTKVMTPNP
TPPRSGGHPGARSDNGTGGSEGAGANEGDMEVDELSSLGSASGLAKGGKDAGGSGDEEWT
HVTSKEVDPSTGELQSLRVGQEGSLEALGSLTPSQGPSQEPLKSLTLAEAAAYPHLPQDA
DPRLVESLSQMLSMGFTDEGGWLTRLLHTKDCDVGAALDTIHYSKPPQK
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgtctatgaccgtgaaagcctatctccttgggaaggaacacatgccgaaagaaattcgt
cgctttgccgtcgaccaagatgtttcaacgagttttgagtatttgaatcgaaaggttgtt
gatgttttctcaacactgcgaaatgtcccctaccaaatgttttacaaagacgaggacggt
gacatgattgccttctccaccgacgatgagctcatcatgggcctcacctgcatcaaggac
gacaccttccgcctcttcatcaaggagaagaaggagcacaggcgcgagttccctcctttc
gccttcccgggcggtgtccctcctttcgcctttccccctcaccctggagcaccccatatg
gggccccctccaccccatggcccaccacctcatggtcatggccctcacgggccccccatg
gtgcaccccaacgtgacctgtgatgaatgcgagggcccggtggcagggacccgtttcaag
tgcactgtgtgctccaactacgacctatgctccccgtgccaggccaaggggctccacaag
gagcatgtcctcctacccatctggcaccccttcaacaacacatttgagtggttccctcgt
gggaagtggatgcggaagatgagacactgcatgtgggctcaggcccaaagccaggcccag
cctggtccctctgggtcccagcctggtccctctgggtcccagccaggccaggcggccccc
gaagacagtcagccatcctctgatgcctcatctgcttcctcccagcagtcccaggccaat
atggattacctaaagaacattggagaaggggtggcagccatgcttagcccactgggtatc
gatgtggatattgacgtggagcacgaggggaagaggaccaaggtgatgacccccaacccg
accccacccaggtcaggaggtcaccccggtgctaggagtgacaacgggacaggggggtct
gagggagcaggggcaaacgagggagacatggaggtggacgaactgagcagcctggggagc
gccagtggtttggctaagggtggtaaagacgctgggggcagtggtgacgaggaatggact
cacgtgacctccaaggaggtggacccctctactggagagctccagtctctcagggtgggt
caggagggctcactggaagccctagggtccctcaccccttcccagggtccctcacaggaa
ccactgaagtccctcactctcgctgaggccgcagcctacccccacttgcctcaagatgca
gacccacgcctggtggagtcgctgtcccagatgctgtccatgggcttcacagacgagggt
ggctggctcacccgtcttctccacaccaaggactgtgacgttggggccgccctggacacc
atccactactccaaacccccccagaagtaa
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