Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139392336
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Entry
139392336 CDS
T10872
Name
(RefSeq) protein FAM83H-like
KO
K23931
protein FAM83H
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ocla04812
]
139392336
Cytoskeleton proteins [BR:
ocla04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
139392336
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SACK1
PLDc_2
OKR_DC_1_N
Motif
Other DBs
NCBI-GeneID:
139392336
NCBI-ProteinID:
XP_070996351
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All DBs
Position
32:9838091..9868803
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AA seq
1344 aa
AA seq
DB search
MAHRSQSSDFGDNPLDPNFLPPHYREEYRLAIDALVETDLQGYYEFLQKADVVDFLCQPE
MEHIKTTVQTPSQASNVPELSYHEADADGSSDTYWPLHSDTAAPGLDLGWPLQVHSFIGP
TEVTTLVNPSDPDMPSIKEQARRLIKNAQHVIAVVMDMFTDVDLFADLLDATARHVPVYI
LLDEQNAHHFVSMVTNCKINLDLVHMMRVRTVAGMTYFCRTGKSFKGQVKDRFLLADCRA
VLSGNYSFMWSYEKLHRCIAHLFLGELVTTFDEEFRILFAQSQPLTVDHALVPVSSDSSS
SSYYGNQFGMKGPLRHPLGFQRHTPELTGYPFGGGGETERSAFRRDDLFRHAIESGGLNL
GTFAASQQFRMQQSFLEQGRSMVSRQMEISASDYKGQSNAEGTQESYSSSRQYMKHRVIN
NQEETEQHYHREQSQSSHYYQGGEGPGLMPGLGSGLGSGLGSGLGSGLGSGLGGHGSGHG
HYDRLRNRPALDQYSDSGYPHEEPPGPEDYGRDYLSSQDLKHNPGPPPAGGRYGGGSDHK
RPTVGQPYVCQSSPTHPNPPEKQLFPVPAVADQDPKARQGLRSWRINSYLSTYEDTGEEG
LPQPLGPDAFQDPESEGNPYASEGSVSRFEAREPPNVPSKPRPDIRPPRYGKPFMPESTR
KDGADSRNIERERAREKDREREVGGREVGVDVEMPSSREASGEVVLSKHESFRTRINPML
QRSSRLRSSLIFSSSKTETHLGGLGMKVANEEDEESDMLHTTSIVQQILEKRFSREPFEW
RKKAEENEREKKKKDEEKEVVLKEEAMPPIVAPASIEPPQPLNMNDPANRLQYFKELAAK
RNASKEAAMKGPLQKTPDLSNTTSSTTSSSITTSSPSSSSTTTSSFSITTSSPSSSSSTT
TSSPTTSSSTTTSSPTPSSSSTTNTSSSTTTSSPTTSSSTTTSSTTTSSTTTTSSTPNPS
PTTISAPKVPSFSVIAPEPAPMKPQVPATLERTRKLSITSRFKTFEPSTTTVQRKDSSSE
SQRKDSSSESQRKDSSSESQRKDSSSESQRKDSSSESQRKDSSSESQRKDKEPSKILKPF
SSLKPFKSSHPRRVSCDEETLTTDATDAEKSELKKSRSQSLSSMSRAESKEGKNLGSSTS
LNTLGGEGKVDTKPLDFLKKQTQKLKGFLGPKDKKSSGGVTSASSGDNKTMRTVVESSEE
SGAAASRLGSSSTADAKATDYVTSSDNHKMTGPSRYQTSSGSVLFSSNLRDDTKVILEQI
SANSQKNRLERGGGGGGGEEAGGEKEVDMAGEKGGLERNPLLGRNRFLRPQGNPQERDSL
LKRMESMRKEKKVYSRFEMGNNLG
NT seq
4035 nt
NT seq
+upstream
nt +downstream
nt
atggcccacagatcccagagttcggacttcggggacaaccccctggaccctaacttcctg
cccccccactacagagaagaataccgtctcgccattgatgctctggtggagacagaccta
cagggttactatgagttccttcagaaagcagacgtggtggacttcctttgtcaaccggag
atggaacacatcaagaccaccgtccagacacccagccaggcctccaacgtaccagagctg
tcttaccatgaggcagacgcagacggctcgtctgacacctactggccgttgcactctgac
acggcggccccggggttggacctgggctggcccctccaggtacacagcttcatcggcccc
acagaggtcacgaccctggtcaaccccagcgaccccgacatgcccagcatcaaggagcag
gccaggaggctcatcaagaacgcacaacatgtgattgccgtggtgatggacatgtttaca
gatgtggatctgtttgctgatttgctggacgccacggcgcgtcacgtccccgtctacatc
ctattggacgaacagaacgcccatcacttcgtctccatggtgactaactgcaagatcaac
ctagaccttgtccatatgatgcgtgtgcggactgtggcggggatgacgtatttctgtcgg
acagggaagtcgtttaaaggacaggtgaaagaccgcttcctattggctgactgcagggcc
gtgctcagcggaaactacagtttcatgtggtcctatgagaagctgcatcgctgcatcgct
catctcttcctgggagaactagtcaccacctttgatgaggagttccgcatcctgttcgcc
caatcacagcctctcaccgtagaccacgccctagtgcccgtctcctctgacagcagcagc
agcagttactacggcaaccagttcggcatgaaggggccccttcgacaccctctgggtttt
caacgacacaccccggaacttacgggctaccccttcggaggaggaggagaaactgagcgt
tctgcattccgtagggatgacctgttccgacatgccatagaatctggaggactgaatctt
gggacgtttgcagcgtcgcagcagttcaggatgcagcagtccttcctggagcagggtcgc
tccatggtctccaggcagatggagataagtgccagtgactataagggccaaagcaacgca
gagggaacccaggagagctactcctcgtccagacaatacatgaagcacagagtcatcaac
aaccaggaggagacagagcagcactaccacagggagcagagccagtccagccactactac
cagggtggtgagggacctgggttaatgccggggctgggctcagggctgggctcagggctg
ggctcagggctaggctcagggctaggctcagggctgggaggacatgggtcgggccatgga
cactacgacaggctgaggaacagaccagcgctggaccagtactctgactcaggctaccct
catgaggaacctcctggtccagaggactacggcagagactacctctcctctcaggacctg
aaacacaacccgggaccaccaccggcaggggggaggtacggaggtggcagcgaccacaag
aggccgacggtgggccagccctacgtctgccagtcctcccccacccatcccaacccccca
gagaagcagctgttcccagtcccagcagtggcagaccaggaccccaaagccagacagggc
ctccgcagctggaggatcaactcctacctcagcacctacgaagacacaggagaggagggg
ctgccacaacctctgggccctgatgctttccaagacccagagtctgaggggaacccatac
gccagtgaggggtctgtatcccgctttgaagcgagagagcctccgaatgtcccctccaag
cctagaccggatatccgaccgccacggtacggcaagcccttcatgcccgagagcacgaga
aaggacggggccgacagcaggaacatagaacgggagagagcgagagagaaagaccgagag
agggaggtgggggggagggaggttggggtggatgtggagatgccatcgtcgagggaggct
tcgggagaggtcgtgctctccaaacacgagtcgttccggacacggatcaacccgatgctc
cagagaagctcccggctgcgctcctccctcatcttctcctcctccaagacggagacccac
ctgggaggcctgggcatgaaggtggccaatgaggaggatgaggaatccgacatgctacac
accacctccatcgtccaacagatcctggagaagagattttcccgggaacccttcgagtgg
cggaagaaggcagaggagaacgagagagagaagaagaagaaagacgaagagaaagaggtt
gtgttgaaagaggaggctatgccccccatagtcgccccagcatcgatagagcccccccag
ccgttgaacatgaatgaccctgccaatagactgcagtacttcaaggagctggctgctaag
agaaacgcatccaaagaggccgcgatgaaaggaccacttcagaagacaccagacctctca
aacactacttcttccaccacctcctcctccatcaccacctcttccccctcctcctcctct
accaccacctcctccttctccatcaccacctcttccccctcctcctcctcctctaccacc
acctcttcccccaccacctcctcctccaccaccacctcttcccccaccccctcctcctcc
tctaccaccaacacctcctcctccaccaccacctcttcccccaccacctcctcctccacc
accacttcgtccaccaccacttcgtcaaccaccaccacttcctccacccccaacccttcc
cccaccaccatctcagcccccaaagtcccctctttctctgtgattgctccagagcctgcc
ccgatgaaaccacaagtcccagccacactagagcgaacacgcaaactgtccatcacctca
agattcaaaacctttgagccttctactaccacagtccagaggaaagacagcagctcggag
tcacagaggaaagacagcagctcggagtcacagaggaaagacagcagctcggagtcacag
aggaaagacagcagctcggagtcacagaggaaagacagcagctcagagtcacagaggaaa
gacagcagctcagagtcacagaggaaagacaaggagcccagtaagattctgaagcctttc
tcttctctgaagccgttcaagagctcccaccctcgccgcgtctcctgcgatgaggaaacg
ctaacaacagatgccacggacgcggagaagagcgagctgaagaaatctcgctcccaaagc
ttgtccagtatgtctcgcgctgagtccaaggagggaaagaacctgggctccagcacctcc
ctcaacaccctgggaggggaaggcaaggtcgacaccaagcccctggacttcctgaagaag
cagacccagaaactcaaaggcttcctgggacccaaggacaagaagagctccgggggtgtg
acatcggcatccagcggagacaacaagacgatgagaactgtggtggagagctccgaggag
tctggggccgcagcttcacgcctaggctcctcgtctactgccgacgctaaagccacagac
tacgtgacttcctcagacaatcacaaaatgacaggtccgtctcgataccagacctccagc
ggctcggttctgttcagtagcaacctgagagatgacaccaaggtcatcctggaacagatt
tctgccaatagccagaagaaccgtctggagagaggaggaggaggaggaggaggagaggag
gccggaggggagaaggaggtagacatggcaggagagaaaggagggttggagaggaatccg
ttgcttgggaggaaccgcttcctaaggccccagggcaaccctcaggagagagacagcctg
ctgaagaggatggagagcatgaggaaggagaagaaggtctacagccgttttgagatgggg
aataacctgggataa
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