Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139392378
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Entry
139392378 CDS
T10872
Name
(RefSeq) polyhomeotic-like protein 1 isoform X1
KO
K11456
polyhomeotic-like protein 1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
139392378
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ocla03036
]
139392378
Chromosome and associated proteins [BR:
ocla03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
139392378
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-FCS_1
SAM_1
SAM_2
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
139392378
NCBI-ProteinID:
XP_070996433
LinkDB
All DBs
Position
32:complement(33264177..33279212)
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AA seq
903 aa
AA seq
DB search
METDGDQNQGSTNGTTPSGVNSRPSPMNSMSLYERQAVQALQALQRQPNAAQYFQQLMLQ
QQINSAQLQNLAAVQQATFAASRQSSPATNSTSQTTSTTVTSVNVTTSGGGAITSTRAIG
PGSSGTSTISQSVLLGGSAAGQGQMYLRVNRSLRAPLSSQLIFMPGSTATAAMATVTKQP
QTQQQQQQEVTPTSSSNQSDNDQVQNLALRCVGSPKGVGVKTETPERGEIATYSLIQSSH
QQFNQSTQQSPTKPTQLQQSHIKIPTYIQSSNANLSSLNLKTGNHHSNTPSSPSTSVPLS
QLLLSGPNFGRGGAITTVNSAAVATHILVPTSSAPTQSHSYQMGAATIKPNVSTQTLVVQ
PLQKSTINDKGGHGNGPIPIQPKTQQGLRMPLQLPSRNPPPILPAPPANNQTSAAQPPPH
IPVQIVGARPSSIGNPQALALVQARNACSQDGATLLNSSSSASLLTMVASIASRERGDLG
KGVGLKSLQSAQEALSLAHVSHVQAQANQSPRLNQNQNCTLATSISSQSQAAISPPTLSR
SSLTLPLPLVEASSASTVVAANGESVCPQPPQGKSMKRKSESDAANEEDGPPPPHLVPMS
EHSPALSSSAMEAGTGPPSPSPVPSPSPALSVSRVGGGQGERAPPPQAVVKPHVLTHLIE
GFVIQEGAEPFPVSGPVKEPAGEDLAMDNPDASQTETVNTATVLKCEYCKSFAPARQFRG
TKRFCSLTCSKRYNVSCSQHFRLRQGLHLTHSDEDGVLRRRVPHRTSSEIASAKIAGRPL
PVKCRSESSRSDDISSCEEEEDDPMSFSPASSSSCHQPPPTLRLEGSPAPHFLPGSPAQW
SVEEVSQFISSLQDCEELAAHFLSQEIDGQALLLLREEHLMSTMNIKLGPALKICAHINN
LKD
NT seq
2712 nt
NT seq
+upstream
nt +downstream
nt
atggagacagatggggaccaaaaccagggctctaccaatggaaccactccatcaggagtg
aactcccgcccctctccaatgaactccatgtccctgtacgagagacaggctgtgcaggcc
cttcaggcgctgcagaggcagcccaacgcagcgcagtacttccagcagctaatgctgcag
caacagatcaacagtgcccagctacaaaacctggctgcagtacaacaggccacctttgct
gccagtcgccagtccagccctgccaccaacagcacctctcagaccaccagcactacagtc
acatctgtgaacgtaaccacttctgggggaggggccataaccagcacccgcgctataggc
ccaggctcttccgggacatccaccataagccaatcagtgctgctgggtgggagtgcagca
ggacagggacagatgtatctgagagtgaaccggtctctgagggctcccctctcctcacaa
ctcatctttatgcctggtagcacggcaaccgctgccatggcaacggtcaccaagcagcca
cagactcagcagcagcaacaacaggaagttacacctacttcctccagcaaccaatcagac
aatgaccaggtgcagaacctggctttgcgatgtgtcggcagtcccaagggggtcggggtc
aagactgaaaccccagagaggggtgaaatagcaacctactcccttatacagtcatctcac
cagcagttcaaccagtccactcagcagtctcccactaaaccaacccaactgcaacagtcc
cacatcaagatccccacctacatccagagctccaacgccaacctctcctctctcaacctc
aagacgggcaaccaccactctaacaccccctcctcaccctccacctctgtcccactctca
cagctcctcctttccggacccaactttggccggggcggggctatcaccacggtgaactcg
gccgccgtggcgacacacattctggtgcccacctccagtgcacccactcagtcccacagt
taccagatgggtgctgccactatcaagcccaatgttagtactcaaacgctggtggttcag
cctctgcagaaaagcactattaacgacaagggaggccatgggaacggtcccattccaatc
cagcccaaaactcaacaaggtctccgtatgccactgcaactgccctcccgcaacccacct
cccatcctccccgcgccccccgccaacaaccagactagtgccgcccagcctccgccgcac
atcccagtccagatagtaggggccaggccaagctccataggaaacccccaggcattggcc
ttggtccaggcccggaacgcctgttcccaggacggagctacccttctaaatagctccagc
agcgccagcctcctcaccatggtggcctccatcgcatccagagagagaggggatttaggc
aaaggggtgggtctaaagagccttcaatcagcccaggaagccctctcattggcccacgtt
tctcacgtgcaagcacaagcaaatcagagtcctaggctgaatcaaaatcaaaattgcacc
ttggccaccagcatctcctctcagtcccaggccgccatctctcctcccaccctctcccgt
tcctccctcactctacccctgccgttggttgaggcgagcagtgcatccactgtagtggct
gccaatggagagtctgtgtgtcctcagcctccccagggtaagtcgatgaagaggaaatcc
gagtcagacgcagccaatgaggaagatggtcccccccctccccaccttgttcctatgagt
gaacactcccctgctctctcctcctccgccatggaagcaggcactggtccaccttctccc
tcccctgttccctctccttcccctgccctctcagtgtctcgtgtggggggtggccagggg
gagagagccccccctccacaggctgtggtcaaaccccacgtcctcacccacctcatagaa
ggcttcgtcatccaggagggagctgaacccttccctgtgagtgggccagtgaaagagcca
gctggagaagatttggcaatggacaatccagacgccagtcagactgagactgtgaataca
gctacagtgctgaagtgtgagtactgcaaaagctttgccccagccagacagtttagaggg
accaagcgcttctgctccttgacctgttccaagaggtataacgtgagctgcagccagcac
ttccgcctgcgacaggggcttcacctcacccactctgacgaggacggggtcctaaggagg
agggttccccacaggaccagctccgagatcgccagtgccaaaatagccgggagaccctta
ccagtcaagtgccgctccgagtccagccgttcggacgacatctccagttgcgaggaggaa
gaggacgaccccatgtccttctccccggcctcctcctcttcctgtcatcagcctcccccc
acactccgattggagggctcaccggcgccccacttcctgcccggcagccctgcccagtgg
agtgtggaggaagtgtctcagttcatatcatctctgcaagactgtgaggagctggcggcc
catttcctgtctcaggagattgatggacaggccctgctgctgctcagagaggagcatctc
atgtccaccatgaacatcaagctcggtcccgccctcaagatctgtgcccacatcaacaac
ctgaaagactga
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