Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139392424
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Entry
139392424 CDS
T10872
Name
(RefSeq) toll-like receptor 2 type-2
KO
K10159
toll-like receptor 2
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04145
Phagosome
ocla04620
Toll-like receptor signaling pathway
ocla05132
Salmonella infection
ocla05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
139392424
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
139392424
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
139392424
09171 Infectious disease: bacterial
05132 Salmonella infection
139392424
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139392424
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ocla04147
]
139392424
04054 Pattern recognition receptors [BR:
ocla04054
]
139392424
04090 CD molecules [BR:
ocla04090
]
139392424
00536 Glycosaminoglycan binding proteins [BR:
ocla00536
]
139392424
Membrane trafficking [BR:
ocla04131
]
Endocytosis
Phagocytosis
Toll-like receptors
139392424
Exosome [BR:
ocla04147
]
Exosomal proteins
Exosomal proteins of breast milk
139392424
Pattern recognition receptors [BR:
ocla04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
139392424
CD molecules [BR:
ocla04090
]
Proteins
139392424
Glycosaminoglycan binding proteins [BR:
ocla00536
]
Hyaluronan
Cell surface receptors
139392424
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
TIR
LRR_4
TIR_2
LRR_9
LRR_5
LRR_NXF1-5
ThsB_TIR
Motif
Other DBs
NCBI-GeneID:
139392424
NCBI-ProteinID:
XP_070996505
LinkDB
All DBs
Position
3:28455449..28458556
Genome browser
AA seq
896 aa
AA seq
DB search
MCMHTMILLGFVWFRLPLLVALASPTPSTNDERGRCQIYNSGRSANCLGQQLDHVPWKHL
PSTLERIDLSYNEIHAIRVNYFSRLPHLRVLELQFNNISVIEDHAFHNNPLLEHLNIFNN
SLEEIPANALQDLFNLRELLMSNNLYTQATLSVDVFSRLTHLKALSMGGPLVKGLRKGDF
QALRNIQLQDFAIKTSSNISYYEPGSLKVIQTGRMGFDMAIDQKPNFLPLILRDLANKTF
SLIQFRNLFEFMYYMEDEDIFRGLQDIKVDSLIFHRGKFNENLMRMALFNLQVTPLKRLT
LQYIDFARSPNFLDNGLGSSIKDLALSRLNLWHISNPDILRFDWRFTWFNKVRLLSIQNV
NFNSVPCDAWLNMEDMEVLDISNNRLQDNILFNQRCDYRGTMPALRSFNVSTNQLTSLQD
LASLTREFKQLKVLDVSHNMLGSAEKSRNCNWMQNITQVIAHHNRFESGVLQCLPTTVQF
LDLSYCDLDQLDMAYFQQTISLKELLLNGNKIKFIPSGWRSHSLQSLALDGNSFGLISMG
SFQDMPQLSRLTAGNNPFHCTCDLHAFIQDTISKGKVNITDWPENYKCYHPEALLNTAVA
NFFPGHVACDIRLVIIICVATTAAVVLVLMLICYIFNVPWYIKATYQILRAKYRAHQEGA
SGKSQIYVYHAFISYSHPDADWVRDQLLPCLENSKPPYRLCIHERDFMPGKWIIDNIIEN
IESSEKVIFVLSHHFVNSDWCNYELYFAQQRAIGKTFSDVILVVKEPIDPESLPSKYCKL
KKMLYTKTYLEWPQQAKQQTFFWAQLRSCLGKPTVTKEQALSGRSSSVSSVGAVPVIELP
LEDGKPAIAMPNLEAELHKVVPQEIKNLSVRSAEFYGQRPIPVAVASDKISQACSL
NT seq
2691 nt
NT seq
+upstream
nt +downstream
nt
atgtgcatgcacacaatgattctactgggttttgtgtggtttagactgccacttcttgtg
gcccttgcctcaccaaccccttctacgaatgatgagagaggccgctgtcaaatctacaac
tctggtcgctccgcaaactgccttggtcagcaactggatcatgttccatggaagcacctc
ccttccacgcttgaaaggatagatctctcctacaatgaaattcatgccattcgtgttaat
tacttttctcgcctacctcatcttcgtgtcctcgagctgcagttcaacaacatctctgtg
attgaggaccatgccttccacaacaaccccctcctggagcatcttaacatctttaacaac
tccctagaggaaatccctgccaacgctttgcaggacctcttcaatctaagggaactcctt
atgtcgaataacctttacacccaggccacattgtcagttgacgttttctccagattgacc
cacctcaaggccctgtccatgggcggccccttggtcaagggtctaaggaaaggggacttc
caggcattgaggaacattcagttgcaggactttgccattaaaacttcatcaaatataagt
tactatgagccgggtagtctgaaggtaatccagacaggtagaatgggttttgacatggcc
atagatcagaagccgaatttcctacctttgattctacgagacttggccaacaagactttc
agtctcatccaattcagaaacctctttgagttcatgtattacatggaagatgaggatatt
ttcagaggcttgcaagacatcaaagtagattcgctcatctttcaccgtggaaaattcaat
gagaaccttatgaggatggccctgtttaatctacaggtcaccccccttaaacgtctgaca
cttcaatacattgactttgctcgctcgcccaactttctggataatggcttgggatccagt
atcaaagaccttgcactgagtagactaaatttgtggcacatcagtaatccagacattttg
cgatttgactggcgcttcacatggttcaacaaagtccgactgctgtcaattcagaatgtc
aacttcaactctgtgccttgcgatgcctggcttaatatggaagacatggaggttttggac
atctcaaacaaccgcctgcaggacaacatcctcttcaaccagagatgcgactacaggggc
accatgccggctcttcgttccttcaatgtcagcaccaaccaactgaccagccttcaggac
ttagcctccctgaccagggagttcaaacagttgaaggtcctggatgtcagccacaacatg
ctgggctctgctgagaagagtcgcaactgtaactggatgcagaacatcacccaggtgatc
gctcaccacaaccgattcgaaagtggtgtcctccagtgtctgcccaccacagtacaattc
ctggacctctcgtactgtgacctggaccagctggacatggcctacttccaacaaaccatc
agcctcaaggagctcctgctcaatgggaacaagatcaagttcatcccctctgggtggaga
agtcactccttgcagtcactggctttggatgggaactcctttgggctcatcagcatgggc
tccttccaggacatgccccagctgtctcgactgacggcggggaacaacccattccactgc
acctgcgacctccatgccttcatccaggacacaatttccaaggggaaggtcaacatcact
gactggccagagaactacaagtgttaccatccagaggccctgctcaataccgctgtggca
aatttcttcccgggtcacgtggcctgcgatatcagactggtcatcatcatctgtgtggct
actactgcagctgtggttttagtgttgatgcttatatgctacatattcaatgttccctgg
tacatcaaagccacatatcagatcctcagagccaaatacagggctcatcaggaaggagca
tctggaaaatcacagatctatgtttaccatgcctttatctcctacagccacccagatgca
gactgggtcagggaccagttgttgccctgcttggagaacagcaagcccccctaccgactc
tgtatccatgagagagacttcatgccaggaaagtggatcatcgacaacatcattgaaaat
attgagagcagcgaaaaggtcatatttgtgttgtcacaccactttgtgaacagcgattgg
tgcaactacgagctctactttgcccagcaaagagccatcggcaagaccttcagcgatgtt
attctggtggtgaaagagcccatcgaccctgaatctctgcccagcaagtattgtaagctc
aagaagatgctgtacaccaaaacgtacctagagtggccccagcaagccaagcagcagacc
ttcttctgggctcaacttaggagctgcctgggcaagcccacagtgactaaagagcaggct
cttagtggtaggagcagcagtgtatcctcagtgggtgctgtgcctgtgatagagctccct
ctagaggatgggaaaccagcaatagctatgccaaatttagaagcagagctccacaaagta
gttcctcaggagatcaaaaatctttcagtgagaagtgcagagttttatgggcaaagacca
atccctgtagccgtggcatcagacaaaataagccaagcatgtagcttgtaa
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