Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139392630
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Entry
139392630 CDS
T10872
Name
(RefSeq) WASH complex subunit 3-like
KO
K18463
WASH complex subunit CCDC53
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
139392630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139392630
Membrane trafficking [BR:
ocla04131
]
Protein recycling
Others
WASH complex
139392630
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CCDC53
Htt_N-HEAT
Paramyx_P_V_C
Motif
Other DBs
NCBI-GeneID:
139392630
NCBI-ProteinID:
XP_070996842
LinkDB
All DBs
Position
33:complement(18205601..18211245)
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AA seq
207 aa
AA seq
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MDEDGLPIVGSGIDLTKVPAIQQRRVVAYLNQFIVHTVRFLNRFSTVCEEKLACISLRIQ
QIETTLSILEAKLSSIPGLEDVRVEGVGQRPATEVNGPVVVVVPSQPQTPIAVAVPLPPP
EASPNITEPRAAGDSWMTVAKDPRYARYLKMVQVGVPVMAIKNKMVQEGLDPKLLDTPDA
PVPDAVKKKTLDHDDDSDDGSESSFSD
NT seq
624 nt
NT seq
+upstream
nt +downstream
nt
atggacgaggacggtttaccgattgtgggatcaggaatagatctgaccaaggtcccagcc
atacaacagaggagagtcgttgcctatctcaaccagttcatagtgcacactgtccgcttt
ctcaatcgtttttcgacagtttgcgaagagaaacttgcatgcatatctcttcggatacag
cagattgaaactaccctcagcattttggaagcaaagctctcctctattcctggtttggag
gatgtcagggtggagggtgttggtcagcggccagctacagaggttaatggtccagtcgta
gttgtggtcccaagtcaaccacagacccctatagctgtggctgtgccattgccacctcct
gaggcgtctccaaacataacagaaccaagagcagcaggagacagttggatgactgtggcc
aaggacccacgctatgccagatatctcaagatggtgcaagtgggtgttccagttatggcg
ataaagaataaaatggtccaggaaggtttggatcccaaactgcttgacacaccagatgca
cctgtgcctgatgccgtcaaaaagaaaacactggatcacgatgatgacagcgacgacggc
agtgagtcatctttcagcgattga
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