Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139393325
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Entry
139393325 CDS
T10872
Name
(RefSeq) filamin-C-like isoform X1
KO
K27393
filamin-C
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
139393325
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ocla04812
]
139393325
Cytoskeleton proteins [BR:
ocla04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
139393325
Intermediate filaments
Intermediate filament-binding proteins
139393325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filamin
Ig_GEX2_N
CH
Y_Y_Y
Big_3_5
YtkA
CFSR
CH_2
Por_Secre_tail
Motif
Other DBs
NCBI-GeneID:
139393325
NCBI-ProteinID:
XP_070997984
LinkDB
All DBs
Position
33:complement(14886719..14977190)
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AA seq
2783 aa
AA seq
DB search
MMSNNTYYEQQQPPQYYQSTDNGDDEEEEMPATEKDLAEDAPWKKIQQNTFTRWCNEHLK
CLNKRINDLQKDLTDGLKLIGLLEVLSQKKMYRKYHARPNFRQMKLENVSVALEFLEREH
IKLVSIDSKAIVDGNLKLILGLIWTLILHYSISMPMWEDEDDEDAKKLTPKQRLLGWIQN
KVPQLPINNFHRDWRDGKALGALVDNCAPGLCPDWETWDPSQPVENAREAMQQADDWLGV
PQVIAPEEIVDPNVDEHSVMTYLSQFPKSKLKPGAPLRSKTLHPKKAKAYGPGIDPRGNM
VLKPAEFIVETVEAGLGEVLVYVEDSEGHTEEARVIPNNDKNRTYSVIYLPKVEGLHKVK
VMFAGQDIDRSPFVVSVSKAMGDPNKVQARGPGLEPVGNVANKPTYFDIYTAGAGAGDVG
VIIVDSQGRRDTVEIILENNGDSIFRCTYCPILKGPHVIYVTFAGQQIPRSPFTVHISEA
PPSALPPGSPVQIVPQSIRTPPTDKAKRVPPPTPPKPRRPTSNPNMCRASGRGLQPKGVR
VKEVADFKVYTKGAGSGELKVTVKGPKGLEEPVKVRDAGDGVYECDYYPIMTGKYTITIT
WGGQTIPRSPFEVGVSEDVGSQKVRAWGPGLETGMVGKSADFVVEAIGTEVGTLGFSIEG
PSQAKIECDDKGDGSCDVRYWPTEPGDYAVHVICDDEDIKDSPFMAHILLTANDVFPEKV
KSYGPGLEPIGCIVNKPAEFTIDASGAGRGQLKIYAQDAEGFPIDIQITENGDSTFLCVY
IPTKPIKHTIIITWGEVNVPNSPFRVTIGEGSHPENVKVYGPGVEKSGLKANEPTYFTVD
CSEAGQGDVSIGIKCAPGVVGPAEADIDFDIIKNDNDTFTVKYMPPGPGRYTIMVLFADH
EIPISPFRIKVDPSHDANKVRAEGPGLNKTGVEVGKPTHFTIYTKGAGKAKPEVHFTGAA
KGDAVRDFEIIDNHDYSYTVRYTAVQQGNMSISICHGGDPIPKSPFNITVTPPLDLNKVK
VQGLNNKVDVGKDQEFTASTHGAGGQGKLDVKITSPSRRPIPCKLESDTANEVHTVKYIP
PEEGPYKLDISYDGNPVPGSPFTVEGVMPPDPSKVRAYGPGLQGGMVGKAAPFAIDTKGA
GTGGLGLTVEGPCEAKIECQDNGDGSCSVSYLPTEPGEYAINILFAEQHIPGSPFKAMVQ
SVFDPSKVTASGPGLERGKVNEAGSFVVDCSKAGEAELTIEIISDSGSKVEVRVQNNSDG
TYSITYSPQFHGMYTITIKYGGHAVPKFPARVQVDPAVDTSGVKVYGPGVEPRGVLREVT
THFIVDARAKSKTGGSHVKARIVNPSGANTDAYITDKGEGTYRVEYAAYEDGMHLIEVLY
DDVVVPNSPFRVPVTEGCDPSRVRAYGPGLEEGLVNKPNRFTVETRGAGTGGLGLAIEGP
SEAKMSCKDNKDGSCSVEYIPFTPGDYDVNITFGGLPIPGSPFRVPVRELVDPSKVRCSG
PGLGSGVRARVPQTFTVDTSKAGLAPLGVVLYGPTGVAEPVNITDNGDGTHTATYTPAKD
GPYTVCVKYADQEVPRSPYKIKTLPAHDASKVRASGPGLNAQGVPASLPVEFTIDARDAG
EGLLTVQILDPEGKPKKANIRDNRDGTYTVSYVPDMAGRYTITIKYGGDEIPYSPYRIHA
LPSGDASKCLVTVSIGGHGLGSGLGPTIQIGEETVITVDAKAAGKGKVTCKVSTPDGAEL
DVDVVENSDGTFDIYYTAPEPGKYVITIRFGGEHIPNSPFHVVASDTVPIIEEPCDKLQL
QQPYQAYQGYPPHWATEEPVTTGDIMEPMLRPFNLVIPFTVQKGEITGEVRMPSGKTARP
NITDNKDGTVTVKYAPTEKGLHEMDIKYDGNHIPGSPLQFYVDAINSGHVTAYGPGLSHG
MVNKPATFTIVTKDAGEGGLSLAVEGPSKAEINCKDNKDGTCTVSYLPTVPGDYNIIVKF
DNKHIAGSPYTAKITGDDTMRTSQLNVGTATDVSLKISETDLTSLTASIRAPSGNEEPCL
LKRLPNRHIGISFTPKEVGEHVVSVKKNGTHVTNSPFKIMVGQSEIGDACKVKVFGQGLV
EGHIFEVAEFIVDTRNAGYGGLGLSIEGPSKVDINCEDVEDGTCKVTYCPTEPGNYIINI
KFADQHIPGSPFTVKVCGEGRVKESITRKRHAPSIATVGSTCNLNLKIPGNWFQMVSAQE
RHTRTFTRSSHTYTRTECTEISKTRAGETKREVRVEESTQVGGDPFRDVFGEFLGSQSLT
GFSGIPATTRQSQEGVCVTQEGDQGTQEMTAQVTSPGGKTEDAEIIDGEDSTYSVRFIPK
EMGPHTVNVKYRGQHVPGSPFQFTVGPLGEGGAHKVRAGGTGLDRGVAGVAAEFSIWTRE
AGAGGLSIAVEGPSKAEITFEDRKDGSCGVAYVVQEPGDYEVSIKFNDEHIPDSPFIVPI
ATLSDNARRLTVTSLQEMGLKVGQEASFAVQLNGARGLIDAKVHTPSGAVEECYVTELDS
DQHAIRFIPRENGVHSIEVRFNGSHIPGSPFKIRVGEIGQVGDPGMVSAFGPGLEGGTTG
VASDFVVNTCNAGSGALSVTIDGPSKVKMDCQDCPEGYKVTYTPMAPGSYLITIKYGGPS
HIVGSPFKAKVTGARLSGGHSLHETSSVLVETVTKSLSSSMGVAYGPKFSSDASKVVSRG
AGLSKAFVGQKNTFTVDCSNAGTNMLMVGVHGPKTPCEEVYVKHLGNRMYNVTYTVKEQG
NYILIVKWGDENVPGSPFHVTVP
NT seq
8352 nt
NT seq
+upstream
nt +downstream
nt
atgatgagcaataatacttactacgagcagcagcagccgccgcagtactaccagagtacg
gacaacggggacgacgaagaagaggagatgccggctacggagaaggacctcgctgaggat
gcgccctggaagaaaatccaacagaacaccttcaccaggtggtgtaacgagcacctcaag
tgcctcaacaagcggatcaacgacctacagaaagacctgaccgacgggctcaagctcatc
ggtctcctggaggttttgagtcagaagaaaatgtacagaaagtaccacgccagacctaac
ttcagacagatgaaactggaaaatgtgtccgtcgcgctggaattcttggagagagaacac
ataaagctggtatcgatagacagtaaggccatcgtggatgggaacctgaagcttatcctg
ggtctgatctggactctgatcctgcactactccatctcaatgcccatgtgggaggacgag
gacgatgaggacgccaagaagctgacccccaagcagaggctgctgggatggatccagaac
aaggtgccccagctgcccatcaacaactttcaccgtgactggagggatggcaaggctctg
ggagccctggttgacaactgtgccccaggcctgtgtcctgactgggagacgtgggatcct
agccagcctgtggagaatgccagggaggcaatgcagcaggctgacgactggctcggtgtg
ccccaggtgatagcccctgaggaaatagtggatcccaatgtggacgagcactcggtgatg
acctacctgtcccagtttcccaaatccaagctgaagcctggcgccccgctgcgctccaag
actctgcaccctaagaaggccaaggcctatggaccaggtattgatcccagaggtaacatg
gtgctgaagccggctgagttcatcgtggagacagtggaggcggggctaggggaggtgctg
gtctatgtggaggactcagagggacacacagaggaggccagagtgatccccaacaatgac
aagaacaggacgtactctgtcatctacctgcccaaagtggagggccttcacaaggtgaag
gtgatgttcgctgggcaggacatagacaggagtcccttcgtggtgagtgtgtccaaggcc
atgggagaccccaacaaggtgcaggccagaggaccaggactggagcctgtaggcaacgtg
gctaacaagcctacctacttcgacatctacacagcaggtgccggtgctggagacgtgggt
gtgatcattgtggactcccagggcagaagagacaccgtggagatcattctggaaaacaat
ggggacagtattttccgttgtacctattgccctatcctgaaggggcctcacgttatctac
gtgacgtttgctgggcagcagatacccagaagccctttcactgtccacatctcagaggct
ccaccgagcgccctgccccctggctctccggtgcagatagtgccccagtccatacgcacc
ccacccacagacaaggccaagagagtgccccccccaacaccgcccaaacccaggcgacca
accagcaaccccaacatgtgccgggcttcagggagaggtctccagcctaagggggtgagg
gtgaaagaggtggccgacttcaaggtgtacaccaagggagccggcagcggagagctcaag
gtcaccgtcaaggggccaaagggactagaggagcctgtgaaggtgcgtgacgcgggagac
ggggtgtatgagtgtgactactaccccatcatgactggcaaatacaccatcaccatcacc
tggggcggacagaccatcccacgcagcccgtttgaggtgggggtgagtgaggacgtgggg
tcccagaaggtgagggcgtgggggccgggcctggagacaggcatggtggggaagtcagct
gactttgtggtggaggccatcggcacagaggtgggaactctgggtttctccatcgagggc
ccgtcgcaggctaagatagagtgtgatgataagggcgacgggtcatgtgacgtacgttac
tggcccacggagcctggcgactacgctgttcacgtcatctgtgacgacgaggacatcaag
gacagcccctttatggcccacatcctcctcacagccaatgacgtgttccctgagaaggtg
aagagctatggcccaggtctggaaccgattggctgcattgtcaacaaaccagcagagttc
accattgatgcaagtggagccggcaggggccagctgaagatatacgcccaggatgcagag
ggcttccccatagacatccagatcacagagaacggagacagcaccttcctctgtgtctac
attcccaccaagcccatcaaacacaccatcattatcacctggggagaggtcaacgtcccc
aacagtcccttcagggtgaccatcggagagggcagccacccagagaatgtgaaggtgtat
ggtccaggtgtggagaagtcaggtctgaaggccaacgagcccacctacttcactgtggac
tgcagcgaggcaggacaaggggatgtcagtatcggcataaagtgtgcacccggcgtggtc
ggtccggcagaggcagacatcgactttgacatcatcaagaacgacaacgacacgttcaca
gtgaagtacatgccccctggccccggacgctacaccatcatggtgctgttcgctgaccac
gaaatacccatcagccctttcaggatcaaggtggacccctcccatgacgctaacaaggtg
agggcggagggacccggactcaacaagacaggagtggaagtaggtaagcccacccacttc
accatctacaccaagggagcgggcaaggccaagcctgaagtgcacttcaccggagcagcc
aaaggggacgccgttcgagactttgagatcattgacaaccatgactattcctacactgtg
cgctacactgcagtgcaacagggtaacatgtctatctcaatctgccacggcggtgacccc
attcccaagagccccttcaacatcactgtgactccgcctcttgacctcaacaaggtcaaa
gttcaggggttgaacaacaaggttgacgttgggaaggatcaggagttcacagcgagcacg
catggcgccggtggccagggcaagttggatgtgaagatcacctcgccctctcgtcggcca
atcccctgcaagctggagtctgacacggccaacgaagtgcacactgtgaagtacattccc
cctgaggagggaccctacaaattggacatcagctatgatgggaaccctgtgcctgggagc
cccttcactgtggagggggtgatgccccctgacccctcaaaggtgcgtgcctatggccca
ggcctccaggggggcatggtgggcaaggcggcccccttcgccattgacaccaagggtgcg
ggcactggcgggctgggcctgaccgtggagggaccatgcgaggccaagatcgagtgccag
gacaacggcgatggctcctgctctgtctcctacctgcccacagagcccggcgaatacgcc
atcaacatcctgtttgccgagcagcacatccccggctcccccttcaaggccatggtacag
tctgtgtttgaccccagtaaggtcacagcaagtgggccaggcttggagagagggaaggtc
aacgaggcagggtcgttcgtagtggactgctccaaggctggggaggccgagctgaccatt
gagattatttccgattcggggtcgaaggtggaggtgcgtgttcagaacaacagtgatggg
acctattctatcacgtacagcccacagttccatggcatgtatactatcaccattaaatac
ggggggcacgccgtgcccaagttccccgcccgtgtgcaggtggacccagccgtggatacc
agcggggtgaaggtgtacggaccaggagtggaacccagaggggtcctgagggaggtgacc
acccatttcatcgtggatgcccgtgccaagagcaagaccgggggcagccatgtcaaggcc
cgcatcgtcaacccctcaggcgccaacacagacgcctacatcactgacaagggagaaggc
acctatagagtggaatacgctgcctatgaggatgggatgcacctgatagaggtgctgtat
gatgatgtggtggtgcctaacagtccgttccgtgtcccggtaacggagggttgtgaccca
agccgtgtcagagcctacggccctggtctggaggagggcctggtcaacaaacccaaccgc
ttcaccgtggaaaccaggggtgctggtacagggggtctgggcctggccatcgagggtccg
tcagaagctaagatgtcctgtaaggacaataaagatggcagctgcagtgtggagtacatc
cccttcaccccgggagactatgatgtcaacattaccttcggaggcttgcccatcccaggg
agtcctttccgtgtgccagtgagagagctggtggacccaagtaaggtgaggtgttcaggc
ccagggctgggtagtggagtcagagcccgtgttcctcagaccttcacggtggacaccagc
aaggctggcctcgcccctctgggagtggtgctgtacggacctactggagtggctgagcca
gtgaacatcacggataacggagacggaacacacacagcgacctacaccccggccaaggac
ggcccgtacaccgtgtgtgtgaagtacgctgaccaggaggttcctcgcagtccgtataag
atcaagacattgcctgctcatgatgccagtaaggtgcgtgccagtgggccaggtttgaat
gcccagggtgtgcctgccagcctgcctgtggagttcaccatcgatgcccgcgatgctggc
gaaggcctgctcactgtgcagatactggacccagaaggcaagccgaaaaaggccaacatc
cgtgacaacagagatgggacgtacacagtgtcctatgtacctgacatggcagggcgctac
accatcaccatcaagtatggaggagacgagattccctactcaccctatcgtatccatgcc
ctgcccagtggagacgccagcaagtgtctggtcacagtttccattggaggacatggattg
ggttcaggcctcggacccaccatccagatcggcgaggagaccgtcatcaccgtggacgca
aaagctgctgggaaggggaaggtgacctgtaaggtgtcgacgccagatggggccgagcta
gacgtggacgtggtggagaattccgacggaacgtttgacatctattacacggctccggaa
cccgggaaatacgtcatcaccatccgctttggaggagaacacattccaaacagccccttc
cacgtggtggccagtgataccgtccctataatagaggaaccgtgtgacaagctccagtta
caacagccctaccaggcctaccagggctacccccctcactgggccacagaggagccagtc
accaccggcgatatcatggagcctatgctccgccccttcaacctggtcattccgttcacc
gttcagaagggagagatcacaggtgaggtacgtatgccctcaggtaagacagcccgtcct
aacatcacagacaacaaggatgggacagtcacagtgaagtacgcccctacagagaaaggc
ctgcacgagatggacatcaaatatgatggaaaccacatcccaggaagtcccctccagttc
tatgtagatgccatcaatagtggtcatgtgacagcctatggtcctggtctgagtcacggc
atggtcaacaaacctgccaccttcaccatcgtcaccaaggatgcaggggaaggtggtctg
tccctggcggtggagggtccctctaaggcagagatcaactgtaaggacaacaaggatgga
acctgtactgtgtcctaccttcccactgtgccaggagactacaacatcatcgtcaagttt
gacaacaaacacatcgccggcagcccctacactgccaagatcacaggagatgacactatg
aggacatcccagctcaatgttggcacggcaacagacgtgtcattgaagatctcagagaca
gacttgaccagcctgacagcgagcatcagagcaccgtcgggcaacgaggaaccctgcctc
ctcaagagactgcccaatcgacacatcggtatctcatttactcctaaggaggtaggggag
catgttgtgagtgtgaagaagaatgggactcacgtgaccaacagccccttcaagatcatg
gtgggtcagtcagagatcggggacgcctgcaaggtcaaagtgtttggccagggactggtg
gagggacacatttttgaggtggctgagttcatagttgacaccaggaacgcaggttatggt
ggtctgggtctgtctatcgagggtcccagtaaggtggatattaactgtgaggatgtggag
gatggtacctgtaaggtgacctactgtcccactgaaccaggaaattacatcatcaacatc
aagttcgccgaccagcacattccaggaagtcctttcacagtgaaggtgtgtggtgagggc
agggtgaaggagagcatcaccaggaagagacatgctccatccattgctactgtgggcagc
acctgtaacctcaacctcaaaataccaggtaattggttccagatggtgtcggcccaggag
cggcatacgcgcacgttcacgcgcagcagtcacacgtacacgcgaacggagtgcacagag
attagtaagacaagggcgggggagaccaagcgggaggtgcgcgtggaggagagtacccag
gtcgggggagaccccttcagggacgtgtttggagagttcctggggagtcagagtctcaca
ggcttcagtgggataccagccactaccagacagtctcaagagggtgtgtgtgtgacacaa
gagggtgaccaggggacccaggagatgacggcccaggtgaccagtccggggggtaagacg
gaggacgcagagatcatcgacggcgaggacagcacctacagcgtccgcttcatccccaag
gagatgggtccccacacggtcaacgtcaagtaccggggccagcacgtccccgggagcccc
ttccagttcactgtggggcccctgggagagggaggggcacacaaggtccgggctgggggc
acggggctggatagaggagtggcaggagtggcagctgagtttagtatctggaccagagag
gctggagcagggggtctgtccatcgctgtagaggggcccagtaaggcagagatcaccttt
gaagacaggaaggatggatcctgtggagtggcctatgtggtgcaggagccgggtgactat
gaggtgtccattaagtttaatgatgagcacatcccagacagtccctttatagtccccatc
gccactctgtctgataacgcacgccgccttacagtcaccagcctacaggagatgggattg
aaggtgggccaggaggcgtcgttcgcggtgcagttgaacggggcgagggggttgatagat
gctaaggttcacaccccgtccggagctgtagaggagtgttatgttactgagctggacagc
gaccagcacgccatccggtttatcccgagggagaacggagtccactccatcgaagtgcgt
ttcaacgggagccacattcccggtagtcccttcaagatccgcgtgggagagatcggacag
gtcggagacccgggaatggtgtctgcctttggacctgggctggaaggaggaaccacaggc
gtggcatcagattttgtagtgaacacgtgtaatgcggggtcgggtgctctgtcagtgacc
attgatgggccgtccaaggtcaagatggactgtcaggattgtcccgagggttacaaggtc
acttacacacccatggcccccggcagctatctcatcaccatcaaatacggaggaccatcc
cacatcgtaggcagccccttcaaggctaaagtcacaggtgctcgtctctctggtggtcac
agtctacatgaaacttcgtccgtacttgtggagacagtaaccaagtcgttgtcatcgtcg
atgggcgtggcctatggccctaagttctcttcggatgccagtaaggtggtctcacggggc
gccggcctatcaaaggcctttgtagggcagaagaacaccttcacagtggactgcagcaat
gcaggaactaacatgttgatggtgggggtacatggacccaagaccccgtgtgaagaggtc
tatgttaaacatctgggcaacaggatgtacaacgtcacctacaccgtcaaagaacagggc
aactacatcctcatcgtcaaatggggggatgaaaatgtccccggcagccccttccatgtc
accgtcccctaa
DBGET
integrated database retrieval system
