Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139394446
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Entry
139394446 CDS
T10872
Name
(RefSeq) zinc finger protein 407-like
KO
K26729
Zinc finger protein 407
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocla03000
]
139394446
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
139394446
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2_4
zf-C2H2
zf-H2C2_5
zf-C2H2_16
zf-C2H2_ZN142
zf-met
zf-C2H2_15
zf-C2H2_jaz
DUF7963
Motif
Other DBs
NCBI-GeneID:
139394446
NCBI-ProteinID:
XP_070998618
LinkDB
All DBs
Position
3:35523464..35715443
Genome browser
AA seq
1757 aa
AA seq
DB search
MDGELRSGKEINEDKVPHHGDTGNVSTEEMESGGSPSLAKRPRPDDVTADSTGGIEEDTG
GEVADGKESDQPPRAEINIIPETCYGCACPICGFVAKTPTSLKIHSKRKHTGRGKTRAVS
SAEVLVEIDGSTTGATARSSNYKTGGDTEWKVSSRERQQDAIESQGSEAGGSEGEVTTII
AKEEIAEIQGTGRDAFDRKMTPIATEEIAEEEQEKTPGKKMVGKRGTKPKTIHACSYCGH
EFKDKPSLDTHIKRRHTKEMNYFCEFCLYACVAKCDYEKHCLSNKHNKRVTESRESSGLS
SPTDKKTAEQAQIFASTTTQTRASKRALGARFQLQCGSCEFRVSNSALLESHARLKHHGE
HRFLCNVCHYYTATSEWMDTHVSSESHQRVAEEKNAGSSFEDCVEKVSIDAVGDDMLTDD
VAVGVIGHDGELHPDVNEDAVEAAKAVLENMEEHMDERIPPKRRRGRPKGPAATTCEYCG
LLASNSTNLNVHIRRKHSRQYSFTCRLCSYNCVTKGDMDRHCVTKKHLKRVEDASSDGQV
DLDTSVQVVSTESGSQASEVEAIHQNSPVRRGSKGEGGATDKEGELSQDDDKAQVSSPKK
SKYDLVNSCSHCKFVAHSIPSLDLHVKRRHTRDFEFVCLACSYYAVTRQEMSRHASTDKH
KQKSEVYLENLESSVAKDLAQPEEEATELGNRADPDADNNARTEDPSPSVPPDTDMEQPT
NTDTTTDQPNIIDTDQPTDTDTDQPIDTDQPNNTDQLPIIDAEKPTDTDADQPTDTDTDQ
LPIIDAEKPTDTAADQPTDTDQSNNTDTDQLPIIDAEKPTDTDADQPIDTDQPNDTDKDQ
PPCTDTDHPTNNDTDQSKDIDQPNITDIDQPNITDTDQPPITNTEQPTDTATDQPTDTEH
PTQTSDVLSNGHAAPIVEVSGTVAEENTEIQVACEASGGGAEQTSNEAPGTIDPQVAPAE
ITITPPEEGQKEGAEAEPVCSDDDVEMADEKPDISSPEKQLTRALPFDACIVPLKSLTEA
ELALHEERMAHSVEDHSGPAVSGLTGAGSFQKIKRTKPVGASGLSKRLTPNPRIRCEDCG
FVADGMSGLNVHISMKHPSKEKHFHCMLCGKSFYTESNLHQHLTSAAHLRNEQASIEELP
EGGATFKCVKCTDPFETEQELFVHIKEKHEELLREVNKYVLEDTEQINREREENQGSVCK
HCGKVCKSSNSMAFLAHIRTHTGSKPFKCKICNFATAQLGDARNHVKRHLGMREYKCHIC
GWAFVMKKHLSTHLLGKHGLGQPKERKFECDLCDRSFSEKWALNNHMKLHTGDKPHKCAW
PSCHYAFLTLSAMKDHYRTHTGEKSFLCDLCGFAGGTRHALTKHRRQHTGERPFKCQLCG
FASTTQSHLTRHKRVHTGEKPYQCPWCDYRSNCAENIRKHILHTGKHEGVKMYNCPKCDY
GTNGPMDFRNHLKEHHPDIENPDLAYLHAGIVSKSFECRLKGQGATFVEVDTAFDGAFPV
RRVGSIEGVQQVIIIQGYGSGEMAFDQALEESAAATLRDLAMAGQVAEVLHITEDGQVIS
SGREVSAGGAHHLAGGTTRYVLLESGGSAAGGHGGHGGGATHHHMVSESSTALDALLSAV
SEMGQQEEDSQEVMTQEVVSDVVEEEEEVEVKTEEEVWEEQQVQEEQVVQEVLQFAASHL
MKEGLTQVIVNDEGTHYIVTELDDNTLQVEGTMYTQHQGGEDDQQSEGVSEGQAGERMVY
YLDGTPHNVVLEKVEVD
NT seq
5274 nt
NT seq
+upstream
nt +downstream
nt
atggacggagaattaaggtcagggaaggaaattaacgaggacaaggtgcctcatcatggt
gacacaggaaatgtctccacagaggaaatggagagtggaggaagtccttccctagcaaag
aggcccaggcctgatgatgtcacagctgacagcacaggagggattgaggaggacaccggt
ggtgaggtggctgatgggaaggagtcagaccagccccctcgggctgagattaacattatc
ccggagacatgttacggctgtgcctgtcccatctgtggctttgtggccaaaacgccaact
tccttgaagattcactccaagaggaagcacaccggtagaggaaagaccagggctgtgagc
tcagctgaggtacttgttgaaatagatggctccacaaccggagcaacagcacggagttca
aattacaagacaggtggagacactgagtggaaagtgagcagcagagagagacagcaggat
gccatagagagtcagggctcagaggcaggaggttctgagggggaggtgactacaataata
gccaaagaggaaatagctgagatacaagggacagggagagatgcttttgacaggaagatg
actccaatagctacagaggagattgcagaggaggagcaagaaaagacccccggtaagaag
atggtaggtaaacggggcaccaagccaaagactatacatgcttgcagctactgtggtcac
gagtttaaggacaagccgagcctagatacacacatcaagagacgccacaccaaggagatg
aattacttctgtgaattctgcttgtacgcctgtgtggcaaagtgcgactacgaaaagcac
tgtcttagtaacaagcacaacaaacgagtcacggaaagcagggaatcctctggcctctcg
tcacccacggacaagaagacagccgaacaggctcaaatctttgcctccacgacgactcag
acccgggcttccaagcgtgcgctcggtgccaggttccagctgcagtgcgggagttgcgaa
ttcagggtcagcaactctgctttgctggagagccacgctcggctaaagcaccatggcgag
catcgcttcctctgtaacgtctgccactactacaccgctacatctgagtggatggacaca
cacgtgtcctcggagagccaccagcgtgtggctgaggagaaaaatgcagggtcctccttt
gaggactgcgttgagaaggtgagcatagatgcggtcggcgacgacatgctgacagatgac
gtggcagtaggggtcatcggacatgacggagagctgcaccctgatgttaatgaggatgct
gttgaggctgcgaaggccgtgttggagaacatggaagagcacatggacgagagaatccct
cccaagaggaggagaggcaggccaaaggggcccgctgcaactacttgtgaatactgtggc
cttctcgcctccaatagtaccaatctaaacgtgcatattcgtcgtaagcacagccggcag
tacagcttcacctgcaggctttgttcttacaactgtgtgacgaaaggcgacatggaccga
cactgtgtcacaaagaagcaccttaaacgcgtggaggatgctagcagcgatggccaagtg
gacctggatacatcagtgcaggtcgtgagtacagagtcaggctctcaggccagcgaggtt
gaggctatacatcagaatagtccagtcagaagagggtccaaaggagagggaggggccacg
gacaaagaaggggagctgtcgcaagacgacgacaaagcacaagtgagcagcccaaaaaag
agcaagtacgacttggtcaactcctgcagccattgcaagttcgtagctcattcgattccc
tccctcgacctccacgtgaagaggagacacacccgggactttgagtttgtgtgcctggcg
tgcagctactatgcggtcacgcgtcaagagatgtctcgccacgcctccacggacaagcat
aagcagaagagcgaggtctacctagagaacctggagagctccgtggcgaaagacctggcg
cagccggaggaggaggccacggagctggggaacagagctgaccctgatgctgacaacaat
gctcgcactgaggatccttccccttcagtgccccctgacacagacatggagcagcccact
aacacagacacaactacagaccagcctaacattatagacacagaccaacccacagacaca
gatacagaccaacccatagacacagaccagcccaacaacacagaccagctccctatcatc
gatgcagagaaacccacagacacagatgcagaccaacctacagacacagacacagaccag
ctccctatcatcgatgcagagaaacccacagacacagctgcagaccaacctacagacaca
gaccagtccaacaacacagacacggaccagctccctatcatcgatgcagagaaacccaca
gacacagatgcagaccaacctatagacacagaccagcccaacgatacagataaggaccag
cccccttgcactgatacagaccatcccactaacaatgatacagaccaatccaaagacata
gaccagcccaacatcactgacatagaccagcccaacatcacagacacagaccagccccct
atcaccaatacagagcaacccacagacacagctacagaccagcccacagacaccgaacac
cccacacagacttctgacgttttgagcaacgggcatgcagccccaatagtggaagttagt
ggcactgttgctgaggaaaacacggagatccaggtggcttgtgaggcatccggtggtggc
gcggaacaaaccagcaacgaagccccaggtacaattgatcctcaggttgcaccagcagaa
atcaccataacaccgcctgaggaaggccagaaggaaggggccgaggcagagccagtctgt
tccgacgacgacgttgagatggcagatgagaaacctgacatctcttccccagagaaacag
ctcaccagggcgctgccattcgacgcttgcatcgtacctctcaagtccttgactgaagcc
gagctggctctgcatgaagaacgaatggctcactctgttgaggaccattctggcccggct
gtaagtggcctgaccggggcgggcagttttcagaagatcaaaagaaccaaacctgtaggg
gcttcaggtctgtccaagcggttaactcccaacccccgcatccgctgcgaggactgtggc
ttcgtggcggacggcatgagcggcctcaatgtgcacatctccatgaagcacccgtccaag
gagaagcacttccactgcatgctgtgcggcaagtccttctacacggagagcaacctgcac
cagcacctgaccagcgccgcccacctgcgcaacgagcaggccagcatcgaggagcttccg
gagggcggcgccaccttcaagtgcgtgaagtgcacggacccgttcgagacggagcaggag
ctcttcgtgcacatcaaggagaagcacgaggagctgttgcgcgaggtcaacaagtacgtc
ctggaggacacggagcagatcaaccgcgagcgcgaggagaaccagggcagcgtgtgcaag
cactgcggcaaggtgtgcaagagcagcaactccatggccttcctggctcacatccgcaca
cacacaggatcgaagccgtttaagtgcaaaatctgcaactttgccaccgcccagctgggt
gacgccaggaaccacgtgaagagacatctgggcatgagagagtacaagtgccacatctgt
gggtgggcctttgtgatgaagaagcacctgagcactcacctgttggggaaacatggactg
ggccagcccaaagagaggaagtttgagtgtgatctttgcgaccggtcgttcagtgagaag
tgggctctgaacaaccacatgaagctgcatacgggggacaagccccataagtgtgcctgg
ccatcctgccactacgccttcctcaccctgtctgccatgaaagaccactacaggacacac
acaggagaaaagtccttcctgtgcgatctctgtggttttgcgggtggcacgcgacacgcc
ctcaccaagcatcgccggcaacacacaggagaacggcccttcaagtgtcagctgtgcggc
ttcgcctccaccacccagtcccacttgacccgccacaagcgcgtgcacacaggggagaag
ccctaccaatgcccctggtgcgactacagatccaactgtgcggagaacatccgaaagcac
atcctgcacacggggaagcacgagggagtgaagatgtacaactgccccaagtgtgactac
ggcaccaacggccccatggacttcaggaaccatctgaaggagcatcaccccgacatcgag
aaccctgacctggcctacctgcatgcaggtatcgtgtccaagtcgttcgagtgtcgtcta
aagggccagggagccacgttcgtggaggttgacacagcgtttgacggggcattcccggtg
cgaagggtgggctccatagagggtgtccagcaggtgatcatcatccagggttacggcagt
ggggagatggccttcgaccaggccctggaagagtcagccgctgccaccctgcgagacctg
gccatggcgggccaggtggccgaggtgctccacatcaccgaggacggccaggtcatctcc
tcggggagggaggtgtctgcaggcggggcccatcacctggccggaggcaccacccggtac
gtcctactggagtccggcgggtctgcagccggaggtcacgggggtcatgggggaggggcg
acgcaccaccacatggtgtcggagtcatccacggctctggatgccctcctcagtgccgtc
agcgagatgggccagcaggaagaggacagccaagaggtcatgacccaggaagttgtgtca
gacgtggtggaggaagaggaggaggtggaggtgaagacggaggaggaggtgtgggaggag
cagcaggtgcaggaggagcaggtggtccaggaggttctgcagtttgcagccagccatctg
atgaaggaggggctgacgcaggtgatcgtcaacgatgaagggacccactacatcgtgacg
gagttggatgacaacaccctgcaggtggaggggaccatgtacacccagcaccagggaggg
gaggacgaccagcagagcgagggagtttcagaaggccaggctggggagaggatggtctac
tacctggatggaacgccacacaatgtggttctggagaaggtggaggtggactag
DBGET
integrated database retrieval system
