Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139395863
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Entry
139395863 CDS
T10872
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase lunatic fringe-like
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla00514
Other types of O-glycan biosynthesis
ocla04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
139395863
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
139395863
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ocla01003
]
139395863
Enzymes [BR:
ocla01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
139395863
Glycosyltransferases [BR:
ocla01003
]
Glycan extension
O-Glycan
139395863
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fringe
Glyco_tranf_2_4
Galactosyl_T
Motif
Other DBs
NCBI-GeneID:
139395863
NCBI-ProteinID:
XP_070999274
LinkDB
All DBs
Position
Unknown
AA seq
387 aa
AA seq
DB search
MSKGVWRKRALSTAGGASFTCLVMMFLLVAVIKHRGTLVEEGSTGREFGTRSLQSLNGMN
NNDKPVNQAPAEDRVGEKCQATQVKGFSAYFSELSRGKRAVEHRAVKARDPTPVEELSPA
DVFIAVKTTKKYHHTRLDLLLDTWISTNMLQTYVFTDGEDDRLRKRMGSHMINTNCSAAH
SRQALSCKMAVEYDTFISSGKKWFCHVDDDNYVNIRPLVKLLSHYSHAHDVYIGRPSLDR
PLEATERFGDAHTRPVRFWFATGGAGFCVSRGLALKMSPWASGGNFMTTADRIRLPDDCT
VGYIIEALLGVGLIRSPLFHSHLENLQLVSPTQIHHQVTLSYGTVDSKRNIINIRGALSL
DEDPTRFRSVHCVLYPDTPWCSALTWY
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaggtgtctggaggaaacgcgccctctccacggctggaggagcctcgttcacc
tgcctcgtgatgatgtttcttctcgtcgccgttatcaaacaccgggggactctcgtggag
gaaggttccaccgggagagagttcgggactcgctccctgcaaagtttaaacggcatgaat
aataatgacaaacccgttaaccaagctccagccgaggatcgggtcggggagaaatgtcag
gcgacccaggttaagggtttctcggcgtacttcagtgagttgagccgggggaagcgggcg
gtggagcacagagcggtgaaggctcgtgatcctacaccggtggaggagctcagtccggcg
gatgtgttcatagcggtgaaaaccaccaagaaatatcaccacaccaggctggatctactg
ctggacacatggatctctacaaacatgctacagacgtacgtattcaccgatggagaggat
gacaggctgaggaagaggatggggagtcacatgatcaatacgaactgttcagcggcccac
agtcgccaggctttgtcctgtaaaatggccgtcgaatacgacaccttcatcagctctggc
aagaaatggttctgccatgtggatgatgataactacgtgaacatacgtccccttgtgaag
ctcctgtctcactacagccacgcccacgacgtctacattggtcggcctagcctcgaccga
ccgctagaagccaccgagaggtttggcgacgcccacacgcgtccagtgcgtttctggttt
gccacaggaggagcagggttctgtgttagtcgaggtctcgccctcaagatgagcccctgg
gccagtggaggtaatttcatgacaacagctgatcgtattcgtctccctgacgactgtacg
gttggttacatcatcgaggcgttgctaggggtgggtcttatccgctccccactgttccac
tctcacctggagaaccttcagctggtgtcaccgacacagatacaccaccaggtgactctg
agttatggaacggttgacagtaagagaaacataatcaatataagaggagcgctctcattg
gacgaagaccctaccaggttcaggtctgtccattgtgtcttatacccagacactccgtgg
tgttcagccctgacctggtactga
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