Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139396848
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Entry
139396848 CDS
T10872
Name
(RefSeq) C-X-C chemokine receptor type 4-like
KO
K04189
C-X-C chemokine receptor type 4
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03250
Viral life cycle - HIV-1
ocla03260
Virion - Human immunodeficiency virus
ocla04020
Calcium signaling pathway
ocla04060
Cytokine-cytokine receptor interaction
ocla04144
Endocytosis
ocla04672
Intestinal immune network for IgA production
ocla04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
139396848
03260 Virion - Human immunodeficiency virus
139396848
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
139396848
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
139396848
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
139396848
09142 Cell motility
04810 Regulation of actin cytoskeleton
139396848
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
139396848
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
ocla04030
]
139396848
04050 Cytokine receptors [BR:
ocla04050
]
139396848
04090 CD molecules [BR:
ocla04090
]
139396848
G protein-coupled receptors [BR:
ocla04030
]
Rhodopsin family
Chemokine
CXC Chemokine
139396848
Cytokine receptors [BR:
ocla04050
]
Chemokine receptors
CXC Chemokine
139396848
CD molecules [BR:
ocla04090
]
Proteins
139396848
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srsx
Motif
Other DBs
NCBI-GeneID:
139396848
NCBI-ProteinID:
XP_070999870
LinkDB
All DBs
Position
3:50552458..50554476
Genome browser
AA seq
362 aa
AA seq
DB search
MSTFYEVEHIFFDNTSYEESGDFDLDLGFEEPCNRVGGDDFQRIFLPTVYGIIFLLGIVG
NGLVVTVMGYQKKVKTMTDKYRLHLSVADLLLVFTLPFWAVDAASSWYFGGFLCTTVHVI
YTINLYSSVLILAFISVDRYLAVVHATNSQTTRKRKLLAERWIYVAVWLPAAVLTVPDIV
FATALDGGSRTICQRIYPQKTSFYWMAGFRFQHILVGFVLPGLVILTCYCIIIAKLSQGA
KGQVLKRKALKTTVILILCFFSCWLPYCVGIFLDTLMLLNVISHSCALEQSLQTWLLITE
ALAYFHCCLNPILYAFLGVKFKKSARDALAVSSRSSHKVLTKKRGAISSVSTESESSSVL
CS
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
atgtctactttttacgaggtcgaacacatattttttgacaacaccagctatgaagaatca
ggtgattttgacttggatttgggtttcgaggagccgtgcaacagagtcggaggtgatgat
tttcaaaggatcttcttaccgacagtttatggaataatctttctgcttggaatcgtcgga
aatggactggtagtaacagtgatgggctaccagaaaaaggtcaaaacgatgactgataaa
tacaggctccatctttctgtggctgacctcctactcgtcttcacgctacctttctgggca
gtggatgcggccagcagttggtactttggtggcttcctctgtaccactgtgcacgtgatc
tacaccatcaacctgtatagcagtgttctgattctggctttcatcagcgtggacaggtac
ctggcagtggtgcatgccaccaacagccaaaccaccaggaagaggaagctgcttgcagag
agatggatctatgtggcggtatggctacctgctgctgttctcactgtgcctgacatagtg
tttgccacagctctggatggaggctccagaaccatctgccagcgcatctacccccagaag
accagcttctactggatggctgggttccgtttccagcacattctggtgggctttgtcctg
cctggtttggtcatcctcacctgctactgcatcatcattgccaagctgtcccagggagcc
aagggtcaagtgttgaagaggaaggctctcaagaccaccgtaatcctcatcctgtgcttc
ttcagctgctggctgccgtactgtgtggggatctttctggacaccctaatgttgctcaat
gtgatctcccatagctgtgccctggagcagagtctgcagacctggctcttaatcacagag
gctctggcatactttcattgctgtctcaaccccatcctttatgctttcctgggcgttaag
ttcaagaaatctgcccgagatgcactggctgtcagcagtaggtcaagtcataaagtactg
actaaaaaaagaggagccatttcatctgtatccactgaatccgagtcttcaagtgtcttg
tgcagttaa
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