Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139402034
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Entry
139402034 CDS
T10872
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase manic fringe-like
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla00514
Other types of O-glycan biosynthesis
ocla04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
139402034
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
139402034
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ocla01003
]
139402034
Enzymes [BR:
ocla01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
139402034
Glycosyltransferases [BR:
ocla01003
]
Glycan extension
O-Glycan
139402034
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fringe
Galactosyl_T
Adeno_E3A
Glycos_transf_2
Motif
Other DBs
NCBI-GeneID:
139402034
NCBI-ProteinID:
XP_071002185
LinkDB
All DBs
Position
Unknown
AA seq
374 aa
AA seq
DB search
MHRRRMLRALPVFILMFFIVLIVDFQLRTRNLHKLNSIHNPFGGDLLRSIQETPLSAAKE
PPKPAKFPRQPAAVSTMNQTVGGLQAEIQRRRDKLRALEQRRVVITPSLLRLTDIFLAVK
STGRFHGTRLSLLLETWISKTKEHTFIFTDTEDEDITSRGYNVIVTDCPSDHSHQALSCK
MSAEYDHFMASDKKWLCHVDDDNYVNPGALLSLLSAFPQGGDVYVGKPSLDHPIKAHELL
EGNKTKEVQFWFATGGAGFCLSRRLAEKMAPWASGPRFEQTSAVIRLPDDCTVGFIVERR
LGISMVHSLMFHSHLENLLLLTPSNIPLQVTLSYGLFENKMNSVELNRLFSKEDDPSRFK
TVHCLLYPLTSWCP
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgcatagaaggaggatgcttcgggcactccctgtttttatattaatgttcttcatcgtt
ttaatcgtggactttcaactaaggacgcggaatctccacaaactcaattctattcacaat
ccgttcgggggcgacttactgcgctcgattcaagagacgcctctctccgcggcaaaggag
ccaccaaagccggccaagtttcctcgacaacccgctgctgtctctactatgaaccagact
gttggtggcttacaagcggagatacagagaaggagagacaagttgagggctttggaacag
agaagggttgtcatcactccatccctgttgaggttaacggacatcttcctcgcggtgaag
agcaccgggaggttccacggcacgcgcctctctctcctcctcgagacgtggatctccaag
accaaggagcacacgttcatctttacagacacggaggatgaagacatcacctccagaggt
tacaatgtgattgtgacagattgtccgtcggaccacagtcaccaggctctgtcctgtaag
atgtctgctgaatatgaccacttcatggcctccgataagaagtggctgtgtcatgttgac
gatgataactacgtgaatcctggagctcttctctccctgctctcagccttcccccaaggc
ggtgatgtctacgtgggcaagcccagcctcgaccaccccatcaaggcccatgaactactg
gagggcaacaagacaaaagaagtgcagttctggtttgccacgggaggagcaggcttctgt
ctgagtcgcagactagctgagaagatggctccatgggctagtggtcccaggtttgagcag
acgtcagcagtgatccgtctgccagatgactgtacagtaggcttcatcgtagagagaaga
ctggggatatccatggtccacagtttaatgttccactctcacctggagaacctgctactg
ctgacgcccagcaatatacctctacaggtgactcttagttatgggctgtttgagaacaag
atgaacagtgtggagctgaatagactcttctccaaggaggatgatccctccaggtttaag
acggtccactgtctactctatccactgaccagctggtgcccttga
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