Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139402704
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Entry
139402704 CDS
T10872
Name
(RefSeq) cystathionine beta-synthase-like isoform X1
KO
K01697
cystathionine beta-synthase [EC:
4.2.1.22
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla00260
Glycine, serine and threonine metabolism
ocla00270
Cysteine and methionine metabolism
ocla00670
One carbon pool by folate
ocla01100
Metabolic pathways
ocla01230
Biosynthesis of amino acids
Module
ocla_M00035
Methionine degradation
ocla_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
139402704
00270 Cysteine and methionine metabolism
139402704
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
139402704
Enzymes [BR:
ocla01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.22 cystathionine beta-synthase
139402704
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PALP
CBS
Methyltransf_12
Poxvirus_B22R_C
Motif
Other DBs
NCBI-GeneID:
139402704
NCBI-ProteinID:
XP_071002702
LinkDB
All DBs
Position
Unknown
AA seq
537 aa
AA seq
DB search
MPAVPSLKDSRVLGPVCPHAARLRVTNGNGDANGSSKVQEGLLQLPTKGGVRDKLEVEDV
TGTIQAVGERKWIRPDLPSRCTWRLGGNHADSPHTHPQQTKAPKILTNILRRIGDTPLVR
MNKIPKTFGLKCEVLAKCEYFNAGGSVKDRISLRMVEDAERAGHLKPGDTIIEPTSGNTG
IGLALAAAVKGYRCIIVMPEKMSMEKVDVLRALGAEIVRTPTSARFDSPESHVGVAWRLK
NEIPNSHILDQYRNPSNPLAHYDTTAEEILEQCDGKVDMLVAGAGTGGTITGIARKLKER
CPNIQIIGVDPEGSILAEPEELNKTDKTQYEVEGIGYDFIPTVLDRSVVDSWYKSNDEES
FNMSRMLVRDEGLLCGGSSGTAMAAAVRVAKDLKEGQRCVVILPDSIRNYMTKFLSDKWM
FQKGFLKESDIMVNKPWWWNLKLQGLNLSAPLTVLPTVSCQKTIKILKENGFDQAPVVDE
AGLVLGMVTLGNMLASVLAGKIKPSDPVNKVIYTQFKQVSLTHTHTHTCLQAHFFCK
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcggtcccctcccttaaagacagcagagtcctgggccctgtgtgcccgcacgct
gccaggctacgcgtcaccaacggcaatggggacgccaacggatcctccaaggtccaggaa
gggctgttacaactcccaaccaaggggggcgtcagagacaagctagaggtggaggacgtg
actggaaccatccaggcggtgggggagaggaagtggatccgtcccgaccttcccagccgg
tgcacctggagactggggggcaaccacgctgactccccccacacccatcctcaacagacc
aaagctcctaaaatcctcaccaacatcctccggaggatcggtgacaccccgctggtgcgc
atgaacaagatccccaagaccttcggcctcaagtgtgaagtcttggccaagtgtgagtac
ttcaacgcgggcggcagtgtgaaggataggatcagtctgcgtatggtggaggatgcagag
agggcaggacatctgaaaccaggagacaccatcatagagcccacctcaggcaatacaggt
atcggtctggctctggctgcagctgtgaagggttaccgctgtatcattgtcatgcctgag
aagatgagcatggagaaggtggatgttttgagagccctgggcgcagagatcgtccgtact
cccaccagcgctcgtttcgattcaccagagtctcacgtgggcgtggcttggcgcctgaag
aacgagatccccaactctcacatcctggaccagtaccgtaaccctagtaaccccctggcc
cactatgacaccacagcagaggagatactggagcagtgtgatgggaaagtggacatgctg
gtggcaggcgctggcacaggcggcaccatcactggcattgcccgcaaactgaaggagagg
tgcccaaacatccagatcatcggtgtggaccctgaaggctccatcctggctgaaccagag
gagctgaacaagacagacaagacccagtacgaggtggagggcatcggatacgacttcatc
cccactgtactggaccgatcagtggtggatagctggtacaagtccaacgatgaggagtcc
ttcaacatgtcccgtatgctggtcagagatgagggcttgctgtgtggtggcagctcgggc
acggccatggcagcggcggtgagggtggccaaggacctgaaggagggccagcggtgtgtg
gtcatcctgccagactccatccgcaactacatgaccaagttcctgagtgacaagtggatg
ttccagaaaggcttcctgaaggagtcagacatcatggtaaacaaaccctggtggtggaac
ctgaagctgcaggggttgaacctctctgcccctctgaccgtcctgcccacggtcagctgt
cagaagaccatcaagatcctgaaggagaacggctttgaccaggcccctgtagtggacgag
gctgggctggtcctaggaatggttactttggggaacatgctggcctctgtgctggctggg
aagatcaaaccctcagacccagtcaacaaggtgatctacacccagttcaaacaggtcagt
ctcacacacacacacacacacacgtgtttgcaggcacactttttctgtaagtag
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