Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139403152
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Entry
139403152 CDS
T10872
Name
(RefSeq) radixin isoform X1
KO
K05762
radixin
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04517
IgSF CAM signaling
ocla04530
Tight junction
ocla04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
139403152
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
139403152
09142 Cell motility
04810 Regulation of actin cytoskeleton
139403152
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ocla04812
]
139403152
04147 Exosome [BR:
ocla04147
]
139403152
Cytoskeleton proteins [BR:
ocla04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Ezrin/Radixin/Moesin
139403152
Exosome [BR:
ocla04147
]
Exosomal proteins
Proteins found in most exosomes
139403152
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERM_C
ERM_helical
FERM_M
FERM_C
FERM_N
Motif
Other DBs
NCBI-GeneID:
139403152
NCBI-ProteinID:
XP_071002959
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All DBs
Position
3:71302106..71365426
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AA seq
623 aa
AA seq
DB search
MVTWKLYPFESAAQDLVNGGVRQWSPGRVNETEDDFFAFSQQKGKAGERTKMPKPINVRV
TTMDAELEFAIQPNTTGKQLFDQVVKTVGLREVWFFGLQYTDSKGYSTWLKLNKKVTQQD
VKKENPLQFKFRAKFFPEDVSEELIQEITQRLFFLQVKEAILNDENYCPPETAVLLASYS
VQAKYADYNRDLHRPGYLTSDRLLPQRVLEQHKLTKEQWEDRIQTWHEEHRGMLREDSVM
EYLKIAQDLEMYGVNYFEIKNKKGTELWLGVDALGLNIYEHEDKLTPKIGFPWSEIRNIS
FSDKKFVIKPIDKKAPDFVFYAPRLRINKRILALCMGNHELYMRRRKPDTIEVQQMKAQA
REEKHHKQMERAQLENEKRKREHAEKERAKIEKEKDELVERLRQIEEQTLKAQKELEEQT
RRALELDQERKKAKEEAERLEGERQAAEEAKAALAKQSADQMKNQEQLAAELGEFTAKIA
LLEEAKRKKEEEATEWQHKAISAQEDLEKTKEELKSVMSSPPAPEHDEQDETNAEGSTEL
HSDGVTSHRSEEERVTEAQKNERVKKQLQALSSELAQARDDTKKTQNDMLHAENVKAGRD
KYKTLRQIRQGNTKQRIDEFESM
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atggtgacctggaagctgtatccgtttgagagtgccgctcaggatttggtgaatggaggg
gtcaggcagtggagcccagggcgagtcaacgagacggaggacgatttctttgcattttct
cagcagaagggcaaggctggagagaggacaaagatgcccaaaccgatcaatgtgcgggtc
accaccatggatgcagagctggagtttgccatccagcccaacaccacaggcaaacagctc
tttgaccaggtggtgaagacagtgggcctccgggaagtgtggttctttggcctgcagtac
acagacagtaaaggctacagcacgtggctcaaactcaacaagaaggtgacgcagcaggat
gtgaagaaggagaaccctctgcagtttaagttcagagccaagttcttcccggaggacgtg
tctgaggaactcatccaggagatcacacagagactcttcttcctgcaggtaaaggaggcc
atcctgaatgatgagaactactgtcctccagagacagccgtgctgctggcctcctactct
gtccaggccaagtacgcagactacaacagagacctccacaggcctggctacctcacctcc
gaccgcctgctgccacagagagtcttggagcagcacaagttgactaaggagcagtgggag
gacagaatacagacctggcatgaggaacacagaggcatgctcagagaggactcagtgatg
gagtatctgaagatagcccaggacctggagatgtatggcgtcaactactttgagatcaag
aacaagaaaggaacagagttgtggctgggtgtggatgcactgggactcaatatctacgaa
cacgaggacaagttgacaccaaagattggcttcccctggagcgagatcaggaacatctcc
ttcagcgacaagaagtttgtcattaaacccatcgacaagaaagctccagattttgtgttc
tatgccccgcggttgcggatcaacaagcgtatcctggcgctgtgcatggggaaccacgaa
ctgtacatgaggaggaggaagcctgacaccattgaggttcagcaaatgaaggcccaggcc
agggaggagaaacaccacaaacagatggaaagagcccagctagagaacgagaagagaaaa
cgagagcatgcagagaaggagagggcgaagatagagaaggagaaggacgagcttgtcgag
aggctcagacagattgaggaacagacgctaaaggcccagaaagagctggaggagcagaca
cgcagggccctggagttggaccaggagaggaagaaggcgaaggaggaggcggaaaggttg
gagggagagagacaggcagcggaggaggccaaggcagcgctggctaaacagtccgctgac
cagatgaagaaccaggaacaactggccgctgagctaggagaattcactgccaaaatcgct
ctgcttgaagaggccaagaggaagaaggaagaggaggcaactgaatggcaacacaaagcc
atctcagcccaggaagacctggaaaagactaaagaggagctgaagtctgtgatgtcatca
cccccggcgccggagcacgatgagcaagatgagacgaacgcagagggcagtaccgagctg
cacagtgacggggtcaccagccaccgcagcgaggaggaacgtgtcacagaggcccagaag
aacgaacgcgtcaagaaacagctgcaggctctgagttcggagttggctcaggcgagggac
gacaccaagaagacccagaatgacatgctacatgcggagaatgtgaaggctgggagggac
aagtacaaaaccctgcgccagatccgacagggcaacaccaagcagcgcattgacgagttc
gagtccatgtaa
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integrated database retrieval system
