Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139405629
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Entry
139405629 CDS
T10872
Name
(RefSeq) tumor necrosis factor receptor superfamily member 11B-like
KO
K05148
tumor necrosis factor receptor superfamily member 11B
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
139405629
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
ocla04050
]
139405629
Cytokine receptors [BR:
ocla04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
139405629
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Ortholog
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GFIT
Motif
Pfam:
Death_TNFRSF11B
TNFR_c6
Death
Motif
Other DBs
NCBI-GeneID:
139405629
NCBI-ProteinID:
XP_071004145
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All DBs
Position
3:2091566..2121112
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AA seq
257 aa
AA seq
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MSAREPCVPHRNCSGLGLKTLRPGTPTQNTLCENEAEGSVLECSHHNTQCPTDVSLCEEA
IFQSLASLRLSSVPLERLLESLPGKRVDRKSLEKLKKACSPQEQILLLLRLWREQNKDQV
KLYGIIQGVNHCERKVSRCAGLKNLTLGDLMMVMKSLPGVRAHEEDIRAVVSSCRSQQYL
LQLLHLWKNQNKDLDINKGLAHSLSRLRQQGAPRPLLRSIKKINRIISTSSIHKMYEKMF
LNMIEDGTCFNTKPYNQ
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgtctgccagggagccgtgtgtgcctcacaggaactgctctgggctgggcttgaagacc
ctccgaccggggacccccacccagaacacactgtgtgagaacgaggctgaaggatctgtc
ctggagtgctcccatcacaacacacagtgtcccactgacgtgtcgctgtgtgaggaggcc
atcttccagtctctggcgtctctccgtctgtcctccgtccccctggagcgtctcctggag
agcctgcctgggaagagggtggacaggaagagtctggagaagcttaagaaggcctgctcc
ccccaggagcagatactactcctgttgagactctggagagaacagaacaaagaccaggtt
aaactctacggcatcattcaaggtgtgaaccactgtgagcgtaaggtgtccaggtgtgcg
ggtttgaagaacctgaccctgggtgacctgatgatggtgatgaagagtcttccaggggtc
cgggcccacgaggaagacatcagggccgtggtctcctcatgccgctcccagcagtacctc
ctgcagctcctacacctttggaagaaccagaacaaggacctggacatcaataagggactg
gctcacagcctgagccggctccggcagcagggggcaccacgcccgctcctcaggagcatc
aagaagatcaaccggatcatctccacctcctccatacacaagatgtacgagaagatgttc
ctcaacatgatcgaggacgggacctgcttcaacaccaaaccctacaaccaatag
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