Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139406742
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Entry
139406742 CDS
T10872
Name
(RefSeq) pre-B-cell leukemia transcription factor 1 isoform X1
KO
K09355
pre-B-cell leukemia transcription factor 1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
139406742
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocla03000
]
139406742
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
139406742
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PBC
Homeobox_KN
Homeodomain
DUF7260
UCH
SLT_3
Motif
Other DBs
NCBI-GeneID:
139406742
NCBI-ProteinID:
XP_071005825
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Position
4:33265144..33354109
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AA seq
450 aa
AA seq
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MDEQPRLMHSHAGVGMAGHPGLSQHMEGTGGTDGDGRKQDIGDILQQIMTITDQSLDEAQ
ARKHALNCHRMKPALFNVLCEIKEKTVLSIRGAQEEEPPDAQLMRLDNMLLAEGVSGPEK
GGGSAAAAAAAAASGGGAGADNSAEHSDYRAKLSQIRQIYHTELEKYEQMVSQCGWRGDS
YTGSHGNGNKACNEFTTHVMNLLREQSRTRPISPKEIERMVGIIHRKFSSIQMQLKQSTC
EAVMILRSRFLDARRKRRNFNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCSITVSQV
SNWFGNKRIRYKKNIGKFQEEANMYAAKTAVNATNVSSHGSQANSPSTPNSAGSAGSFNM
SNSGDLFMSVQSLNGDSYQGAQVGANVQSQVDTLRHVISQTGGYSEGLTASQMYSPQGIN
ANVGWQDATTPSSVTSPTEGPGSVHSDTSN
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atggacgagcagccgcggttgatgcactctcatgccggagtagggatggcagggcatccc
ggcctgtctcaacacatggaaggcaccggaggaacggacggcgatgggagaaaacaggac
attggagacattttacagcaaataatgaccatcacagatcaaagtctggacgaagctcaa
gctaggaaacacgccttgaattgccacaggatgaagcctgctctcttcaacgtcttgtgt
gaaatcaaagaaaagacagtgctgagtatccgtggcgctcaggaggaggagcctccagat
gcccagctcatgcgattggacaacatgttgctggcggagggcgtgtctggacctgagaaa
gggggcggttctgcagcggctgcggctgcagctgcagcctcaggaggcggggcaggagcg
gataactcagcggaacactcggactacagagccaagctctctcagatcagacagatctac
cacacagagctggagaaatacgaacagatggtatcccagtgcggatggaggggggacagt
tacacagggagtcatggcaacggaaacaaggcttgtaacgagttcaccacccatgtgatg
aacctgctgagggagcagagtcgcacgcggcccatctctcccaaggagatcgagcgcatg
gtggggatcatccaccgcaagttcagctccatccagatgcagctcaaacagagcacctgc
gaggccgtcatgatcctgcgctcccgcttcctcgacgccagacggaaaagacggaacttc
aacaaacaggcgacagagatcctgaatgagtacttctactcgcacctgtctaacccctac
cctagtgaagaggccaaggaggagctggccaagaagtgctccatcacagtttcacaggtt
tccaactggttcggaaataaaagaatcagatacaagaaaaacattggaaagttccaggaa
gaagccaacatgtacgctgccaaaactgctgtgaacgcgaccaacgtatcctcacatggg
agccaggctaactcgccctccactccaaattctgcaggttctgctggatcttttaacatg
tcaaactccggcgacttgttcatgagcgtgcagtctctcaatggggactcgtaccaaggg
gctcaggtgggagccaacgtgcagtcacaggtggatacccttcgccatgttatcagtcag
acaggcggatacagtgagggcctcacagccagccagatgtacagtccgcagggcatcaat
gcaaacgtaggctggcaggatgctaccaccccctcatcagtgacatcccccacagaagga
cccggaagtgttcactcggacacgtccaactga
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