Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139406766
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Entry
139406766 CDS
T10872
Name
(RefSeq) desmoplakin-B-like isoform X1
KO
K10381
desmoplakin
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04382
Cornified envelope formation
ocla04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
139406766
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
139406766
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ocla04812
]
139406766
04147 Exosome [BR:
ocla04147
]
139406766
Cytoskeleton proteins [BR:
ocla04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
139406766
Exosome [BR:
ocla04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
139406766
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Plectin
Spectrin_2
Spectrin_3
SH3_10
SR_plectin_7
Spectrin
Motif
Other DBs
NCBI-GeneID:
139406766
NCBI-ProteinID:
XP_071005885
LinkDB
All DBs
Position
4:36452352..36488187
Genome browser
AA seq
2798 aa
AA seq
DB search
MSLYGSQGVFYVSRSIGSRPDLSCGTGQYAQSEVHGGSGYGQEYMDDNTYSYSKASMRGG
GGGQGQFPLSGLHQKAYILQGQCQDNLRKAEHYLQAGSDSGRGTVEADHYMALARETIEQ
LKACALDLRQMGQPNDSVVRSVEMCRDQLTGVHMAINGTMQRRSRGSRGSGAWEEAGWSF
NEAMAWIGHQKHLIETAQWGDNSADIEQQLISHSKFDSSIQRSPEVDKAKVELIKKGDKA
NQYALDQEWDTLQKMSHGRSNQLREMQQIIEAISKQIMWVNVREEEELVFDWGDKNIDLY
IPKKQESYSKLMSALEEKDKDLNKLKLKVDSLLKNPHPASDKIEAYMDTLQTQWSWLLQI
TKCIHVHLKENADYSEFFKEANEMYNKLQKAHENIRKKFTSDRNTPLENLLELLKGLEKE
KERIMENKRQVQHLVNKSKSIVRLRPRNPEEEKSCSPVMVQALCDFKQDQKVILKGDEGI
LKDNSQRCKWQVIGPGGLDMLVPSVCLLVPPPNSLGINLANKNEQYYEAILSVWNQLYIN
IKSLISWQYYVQDLTRINSLTVTMLSRMRPEEYRSILKSLEAHYSEFTHCCHGSEMFKDE
DKRSIESQYTGAHAHYDRLLVQLPVYTAQQTGNEEKIKAEEEARILAAEKEEAKVVGTKQ
DHVRKVVVKKKVASVTSQSLTELHELRLRLEGAEAGLTQHIHICLAEDGAHDCGLRITQL
ESVQRDVDSIREEYLRLNERVLKELENMTDSDKAKFLHSQLGLINERLGSLDKCFAAYLQ
RLRALRVLLQSVSRAEDIIKVHEARLTEKETTSLNPAEVGDYRSTLKSMRAELEGKSAVL
VSMETELGKAVHWNGQVGRAFHRCDVDLSIYSEQVNQLSDRWRRIQSQLDSRLRDLEGYL
HLLQQYTTTSSVLSEWIGATRQKHDALQATKIDSITALDEHLNQQKVLNSEIKGKRESVV
SVLGDTDACVNSIKDYELELASYSAGLETLLNIPMKRTMLQSPSTKLTEETTLLQTRYIE
LLTLSGDYNKYLGELHNNMETLKMRNTRIDLLEEELRLLKEDIEDHNAKNSSLEEALVRY
RLELSQSQEQLLSVEEVKRSTALQCSATQDSLASTRGQLKELQEQVTRLNSLVEEEKRKR
RMADERYGEQQDEHEQVLRRRQKELEQANWAKMEVEKSVGTQEREAERLRKQLEEEGQRF
KELEQELSKVRRQCSVEISNLKLSYESQITICRTDIQHLSSQREEVDQGIKLQCDRLEAD
RRDQEDQLKRLNVSLSQAEEQRKMAEEEAHSQRSVVTEEARRRRELEAQVEILVRQRGED
SSQYRDEVSELTKALQDSRGQLVLLTHSLDEEQRRRGALEEERTRMELLLGEIQGKQTSS
SQGVTRLREVEEELVSICTEFKKVSGEKNKAEQSVARLQGCIKELQATLERKDGEVEALR
RTSQEEVIKRRHVETELQKTNHTMREYTSTITILRRSQEEAKTVGRRREEEHRKLQEELE
RRLKEFKASTESLASLSSELKPLQQHLLQEQAKVREANLRNETLYKTIEEKSRVLNESSV
EHERLQTLTQTLTKERLRLEEELRGVKHEREELLRTRQGADDELVAQITVLELQLKSSSG
SSLDTQSLVAELSSEREKLRMEIGQLQSQVFETSCLIQSTETQYNEIEMERDALLLKLKQ
TNQDRARSQKLEEELNHMKVSLESESRIKLCLQEENEKVKKDFLYWKGQYESKEGEVRQF
NSEKEKLERERSSLKTEIERLMRELREVEERYKSRLLITQTQFSELTSVRDSLEAELSKL
RERPYAFAKHTQTDESGKKDLDPATLVFEGVRKMVTAKQLLDCGVINKVTYGQLLNGQKT
VREVSVDIKLNLKGTGSISGVAVGPQGKMSLTEAKRENILSEDSAILLLEAQAATGHIVD
PRANEKMTVQEACKRGVVYEEDRERLLIAEAACLGYRDPNTTKLLSAGQAMRKGLIDRVT
ALRMLQAQESVGGIIDPVLSVFLPKDAAMDRDLIDEDLYRALNQRPECYLNPDTQLGASY
VSLKRRCKAEPTTGLLILPAPEKPMTVKGLRGEVSVTDLMSANLLEKSDMDQLKEGKLTS
QDIEHRLRSYLLGSTCIAGVYNEANDKTLSIYQAMKEGLLKPSTTLELLEAQAASGFMID
PVNNLCLTVVDAYKRGLAGPEFKDKLLSAERAVTGYKDPGTDKIISLFQAIEKGLIEKKH
GIHLLEAQIASGGIIDPRHSHRIEVVTAYKKGYFSKEMNQILTDEGDNSKGFFDPNNQDN
LTYLQLKKRCIIDQKTGMVLLSIKKKKEPPQPITQKSTLRKRRVVIVDPDTNKDMSLKEA
YDKGLIDHEMFLELSQQECEWEEITITTQDGSKRLVIFDRKTEIQYDIRELLEKSVINQS
LYDQYRSQMITLTQFADIITSKTKANRSSASSSSSSSTSSSKARAAATSAAAYSSLLSSS
TTYSPRITSTSSTSIKAEKTSSIIGSSTIGPSIDDCSTITRSTTSSSFTQPDGPSSPSTL
KHIASISVSLACPAEAVVLDGEQSPVGAIFDMEALEKISISEAHKRGLVDSISAQRLLEA
QACTGGIVNPSDGRRLSIQEATSQGIIENDMATRLKPAQKAYIGFEDIKCKHKMSAAEAM
REKWLPYEAGHRFLEFQFVTGGLYDPELGRRRTIKEALKEGWLDGRGAQKLQDTRHHAKN
LTCPKTKLKISYKEAMDNCLVEENTGVKMLQAASASSRGISSPYNSSTPGSTSGSRTGSR
ASSRRGSLDLGSSGSSRRYSIVSSTTYSRTSFSSSSMS
NT seq
8397 nt
NT seq
+upstream
nt +downstream
nt
atgagtctatacgggtcccagggggtgttttatgtcagccgcagtatcgggtccaggccc
gacctgagctgcggaactggacaatatgcccagagcgaagtgcacggtggtagtggatac
ggacaggagtacatggacgataatacttacagctactcaaaggcttccatgcgaggtggt
ggtggaggacagggacagttccccctcagtggcctccaccagaaggcgtacatcctgcag
ggccagtgtcaggacaacctgaggaaagcagaacactacctacaggctggcagcgattct
gggcgcggcacagtggaggcagatcactacatggccctggccagagagaccatagagcag
ctgaaggcctgtgctctggacctcagacagatgggacaacccaatgacagcgtggtccga
agtgtggagatgtgtagggaccagttgacgggagtccacatggccataaacggaaccatg
cagaggcggagccgggggagcagagggagtggcgcttgggaggaagctgggtggagcttc
aacgaggccatggcctggattggacaccagaagcatctgatagagaccgctcagtgggga
gataactctgcagacattgagcagcagctgatcagccacagcaagttcgacagctcgata
cagagaagccccgaggtggacaaggccaaggttgaactgattaagaaaggagacaaggcc
aaccagtatgctctggatcaggaatgggacacgctgcagaaaatgtctcatggtcgtagc
aaccagctgagggagatgcagcagatcattgaggcgatcagtaaacagatcatgtgggtg
aacgtgagagaggaggaggagctggtgttcgactggggggacaagaacatcgacctctac
atccccaagaagcaggagagctactcgaaactgatgagtgccctggaggagaaggataag
gacctgaataaactgaagctgaaagtggacagccttctgaagaacccccaccctgcctct
gacaagatcgaggcctacatggacactctgcagacccagtggagctggctcctccagatc
accaagtgtatccatgtccacctgaaggagaatgctgactacagcgagttcttcaaggag
gccaatgagatgtacaataagctgcagaaggcgcatgagaacatccgtaagaagttcacc
agcgacagaaacacgccccttgaaaacttgctggaactactcaaaggcctggagaaagag
aaggagcgaatcatggagaataagaggcaggtgcagcacctggtcaacaagtccaagagc
atcgtgaggctcagaccacgtaaccctgaagaggagaagagctgtagtcctgttatggta
caggccctgtgtgacttcaaacaagaccagaaggtgattctgaagggcgacgagggcata
ctgaaagacaactcccagcgctgtaagtggcaggtaataggaccaggaggactggacatg
ctggtgccctctgtctgtctgctggtgccaccacccaactcccttggcatcaacctggcc
aacaagaatgagcagtactatgaggccatcctgtctgtgtggaatcagctctacatcaac
atcaagagtctcatctcctggcagtactatgtccaggacctcacacgtataaactcactc
accgtcaccatgctgtcccgtatgcgtcccgaggagtaccgcagcatcctgaagagtctg
gaggcacactactcagagttcacccactgttgccatggctccgagatgttcaaggacgag
gacaagcggagcatcgagagccagtacactggagcccatgctcactacgaccgcctgctg
gtccagctacctgtttacactgcacaacagaccggcaacgaggagaagatcaaagcagag
gaggaagccaggatactggcggcagagaaagaggaagccaaggtagtggggactaagcaa
gatcatgtgaggaaggtagtggtgaagaagaaggtggcatcggtgacatcacagagcctg
acggagctgcacgagctcagactgagactggagggggcagaggcggggcttactcagcac
atccacatctgtctggcagaggatggagcacacgactgtggcctgaggatcacacagcta
gagtctgtacagcgggacgtggactctatccgtgaggagtacctgcgtctaaatgagcgt
gttctgaaggaactggagaacatgactgactctgacaaagccaagttcctacacagccaa
ctcggcctcatcaacgagagactgggcagtctggacaagtgcttcgcagcatacctacag
aggctgcgggctctaagggtcctcctgcaaagtgtgtccagggctgaggacatcattaag
gtccatgaggccagactgacagagaaggagaccacatccttgaatcctgcagaggtgggg
gactacaggtccactctgaagagtatgagggcggagctggaggggaagagtgccgtcctg
gtctccatggagacggagctggggaaggcggtccactggaatggccaggtgggcagagcc
ttccacaggtgtgacgtggacctgtccatatacagcgaacaggtcaaccagctgtctgac
cgctggagacgcatccagagccagctagactctagactgcgggacctggaggggtacctc
catctgctccagcagtacacaaccacgagctcagtcctcagtgagtggattggtgctact
cgtcagaaacatgacgcgctgcaggccaccaagatagatagcatcacagccctggacgaa
cacctcaaccagcagaaggtgctgaactctgagatcaaggggaagagggagagtgtggtg
agtgttcttggagacactgatgcctgcgtcaactccatcaaggactatgagctggagttg
gcctcatacagtgctggtctggagactctactaaacatccctatgaagaggaccatgcta
caatctccttctactaaactcactgaggagactacgttgctgcagacccgttacatcgag
ctgctcaccctgtctggtgactacaacaaatacctgggagaactacacaataacatggag
acgctcaagatgcgtaacaccaggatcgacctgttggaggaggagctacggctgctcaaa
gaggacattgaggaccacaacgctaagaacagttctctggaggaggcgttagtccgctac
cggctggagctgtcccagtcgcaggagcagctcctctctgtggaagaggtgaagaggagc
acggccctgcagtgcagcgccacccaggactctcttgcctccacccgcggccaactgaag
gagctgcaggagcaggtgacccgcctcaactccctcgtcgaggaggagaagaggaagagg
aggatggcggatgagcgctacggggagcagcaggatgagcacgagcaggtgctgaggagg
aggcagaaggagttggagcaggccaactgggcaaagatggaggtggagaagagcgtgggg
acccaggagagggaggcagagcggttaaggaagcagctggaggaggaggggcagcgcttc
aaagagctggagcaagagctgtctaaggtaaggagacaatgcagtgtggagatcagtaac
ctaaagctcagctacgagtcccagattaccatctgcaggacggacatccagcacctgtct
tcccagagggaggaggtggaccagggcatcaagttgcagtgtgaccggctagaggctgat
aggagggaccaggaggaccagctcaagaggctgaatgtgtctctgagtcaggccgaggag
cagaggaagatggcggaggaggaggcccattctcagagatctgtggtcacagaggaggcg
cggaggagaagggagctggaggcgcaggtggagatattagtcaggcagagaggggaggac
agtagtcagtatagagatgaggtgtcagagctcaccaaggccctgcaggacagtagaggc
cagctggtcctcctcacacacagcctggatgaggagcagaggaggaggggagcattggag
gaggagaggaccaggatggagctgctcctgggggagattcagggcaagcagacctcctcc
tcccagggtgtgacccggctgagggaggtggaggaggagctggttagtatctgtacagag
tttaagaaggtgagcggtgagaagaacaaggcagagcagagtgtagccaggttacaggga
tgcatcaaggagctgcaggctactcttgaaaggaaagatggggaggtggaggctttgagg
agaaccagccaggaggaggtgatcaagaggaggcacgtggagacagagctccagaaaact
aaccacaccatgcgggagtacaccagcaccatcaccatcctgcgtcgcagtcaggaggag
gccaaaaccgtggggaggaggagagaagaggagcacaggaaactccaggaggagctagag
aggaggttgaaggagttcaaagcctccacggagagtctggcgtctctgagctccgagctg
aagccactccaacagcatctcctccaggagcaggccaaggtccgcgaggctaatctccgt
aacgaaacactctacaagaccatcgaggagaagagccgagtgctcaacgagagctcggta
gaacacgagcgtctccagaccctgacccagaccctgaccaaagagcgactgcggctcgag
gaggagttgaggggggtgaaacatgagagggaggagctgctgaggaccagacagggggct
gatgacgagctggtggcccagatcactgtcctggagctgcagctgaagagcagctcggga
agcagcctggatacccagagcctggtggcagagctctcttcggagagggagaaactcagg
atggagatagggcaactccagagtcaggtctttgagacatcctgtctgattcagtccact
gagacccagtacaacgagatagagatggagagagatgctctgctgttgaagctaaagcag
acaaaccaggacagagcccgctctcagaagctagaggaagagctgaaccacatgaaagtc
tctcttgagtccgagtcacgcatcaagctgtgcctgcaggaggagaacgagaaggtcaag
aaggacttcctgtactggaagggccagtacgagtccaaggaaggcgaggtgaggcagttt
aactcggagaaggagaagctggagcgggagaggagctctctgaagactgagatagagcgg
ttgatgagagagctgagggaggtggaggagcgttataagagcaggctgctgatcacccag
acccaattctctgaactcacctccgtcagagactccctggaggcagagttgagtaaactc
agggagaggccctacgccttcgccaaacacacccagacggacgagagcggaaagaaagac
ctggaccccgccacgctggtcttcgaaggtgtccgcaaaatggtgacggccaagcagctg
ctggactgtggggtcatcaacaaagtgacttacggacagctcctgaacggtcagaagacc
gtccgcgaggtgtctgtggacatcaaactcaatcttaaggggactggtagtatctctggt
gtggctgtgggacctcaaggtaaaatgtccctcacagaggccaagagagagaacatcctc
tctgaagacagcgccatcttgctgctagaggcccaagctgccacaggccacattgtggat
cccagagccaacgagaagatgacggtgcaggaggcgtgcaagagaggagtggtatacgag
gaggacagagagaggctgctgattgctgaggctgcatgtctggggtaccgtgaccccaac
accaccaagctcttgtcagcaggccaggctatgaggaagggcctgatcgatagagtcaca
gctctgcggatgctccaggcacaagaatcagtagggggaatcatagaccctgtcctcagt
gtcttcctccctaaagatgcagccatggaccgggacctgatcgacgaggatctgtaccga
gccttgaaccaacgacctgagtgttacttgaacccagacacccagctgggagccagctat
gtatccctgaagaggagatgcaaggccgaacccaccacaggtctcctgatcctccccgct
ccagagaaacccatgacagtgaagggtctcaggggagaggtgtctgtcacagacctgatg
agtgctaacctcttggagaaatctgacatggaccaactgaaggaaggcaaactgaccagc
caggacatcgagcaccggttgaggtcgtacctccttggctccacctgtattgcgggggtc
tacaacgaggcaaacgacaagaccttgtccatctaccaggccatgaaggaagggttactg
aagcccagcaccaccctggagctcctcgaagcccaggccgcctctggattcatgattgac
cccgtcaacaacctctgtctgaccgtggtcgatgcctacaagaggggcctggctgggccg
gagttcaaagacaaactgttgtctgcagagagggccgtcaccgggtataaagacccaggc
acggacaagatcatctccctgttccaggccatagagaaggggctgatcgagaagaaacat
gggatccatctactcgaggctcagattgccagcgggggcatcatcgaccccagacacagc
caccgcatcgaggtggtgactgcctataagaagggctacttcagcaaggaaatgaaccag
atcctgacagacgaaggggacaactccaagggcttcttcgatccaaacaaccaggacaac
ctaacttatctccagctaaagaaacgctgcattatagaccagaagactggcatggttctc
ctctccatcaagaagaagaaggaaccgcctcagcccatcacccagaagagcactctaagg
aagaggagggtggtgattgtagacccagacaccaataaggatatgtcgttgaaggaagcg
tacgacaaggggctgatcgaccacgagatgttcctggagctgtcgcagcaagagtgtgag
tgggaggaaatcactatcaccacccaggatggatccaagagattggtcatattcgacaga
aagacggagatccagtatgacatcagagagctgctggagaagagtgtgatcaaccaatca
ttgtacgaccagtacagatcgcagatgattactctcacacagtttgctgacatcatcacc
agcaagaccaaagcaaacagatcctctgcctcgtcttcctcctcctcatcaacatcatca
tccaaagccagagcagcagcaacatcagcagcagcatactcatccctgctgtcttcatca
accacctactcaccacggatcacttcaacatcatctacttccatcaaggctgagaagacg
agctccatcattggcagctctaccattggaccctccattgacgactgctccaccatcacc
agatccaccaccagcagctcctttacccagcccgatggcccttcctctcccagcactctg
aagcatatcgccagtatctctgtctccctggcttgccctgctgaagctgtggtcttggat
ggtgagcagagccccgtgggcgccatctttgacatggaggccctagagaagatctccatc
tctgaggctcacaaacgtgggctggtggacagcatttctgcccagagactactggaggcc
caggcttgcaccggaggcattgtaaacccttctgatggacggcgcctgtccatccaggag
gccaccagccaggggatcatcgagaacgacatggctaccaggctgaagcccgcccagaag
gcctacatcgggtttgaagatatcaagtgtaaacataaaatgtccgctgctgaggccatg
agggagaagtggcttccctatgaggcgggacaccgcttcctggagttccagtttgttacc
ggaggcctgtatgacccagagctgggccgcaggagaaccatcaaggaagctctcaaagag
ggctggctggatggaagaggggcccagaagctccaggacacgaggcaccatgccaagaac
ctgacctgccccaagaccaagctgaagatctcttacaaagaagcaatggataactgcttg
gtggaggagaatacaggagtcaagatgctccaggctgcatctgcctcctccagagggatc
agtagtccgtacaactcatccactcccgggtccacatcgggctccaggaccgggtcgagg
gcgagctctcggagaggcagcttggacctgggatcatctggctcctccagacgatacagc
atcgtcagcagcaccacctacagccgcacctccttcagttccagctccatgtcatag
DBGET
integrated database retrieval system
