Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139407087
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Entry
139407087 CDS
T10872
Name
(RefSeq) ribitol-5-phosphate xylosyltransferase 1
KO
K21052
alpha-dystroglycan beta1,4-xylosyltransferase [EC:
2.4.2.61
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla00515
Mannose type O-glycan biosynthesis
ocla01100
Metabolic pathways
Module
ocla_M00872
O-glycan biosynthesis, mannose type (core M3)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00515 Mannose type O-glycan biosynthesis
139407087
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ocla01003
]
139407087
Enzymes [BR:
ocla01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.61 alpha-dystroglycan beta1,4-xylosyltransferase
139407087
Glycosyltransferases [BR:
ocla01003
]
Glycan extension
O-Glycan
139407087
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RXYLT1_C
RXYLT1_N
Exostosin_GT47
Motif
Other DBs
NCBI-GeneID:
139407087
NCBI-ProteinID:
XP_071006564
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All DBs
Position
1:40918324..40923748
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AA seq
439 aa
AA seq
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MKKHHRKIFILIVFVYVVFSLYAAYNVFFNTKVITRVHRVVKKITVATSGGGVVAPYIGD
DVWNPWEDEQANALSALHKQREAFRQYQERIDKNRPKRYKVQIWGKAAIGLYLWEHILEG
PLNPTDIQAQWREGEIQVGKIDFSFYTGPAVIQGHVPLDTDSVVLVLNGREQQKISYATR
WLQHVQTLMQFHAVNRVAVVLLGSERCTNDWISPYLRRHGGFVDLLFLVYDSPWVNDKDV
FQWPLGVATYRQFPVVMPNSHMVSSTRPFLCNFLGTVYKNSSRETLMGILKQTGLDKECI
TTGREKWLPQETVESLRRYQTALAQSELTLCPVGINTECYRIYEACAYGSVPVVEDMVTP
GGCSAARSSPLRLLKTAGAPFIFLKDWKELPGLLEKEKMMSQEERTERRRKLLEWYSSFR
QQMKDRFTEVLEETFFKNS
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaacatcacagaaaaatattcatcctgatagttttcgtgtatgtggtgttttcc
ttgtatgctgcatacaatgtattttttaatacgaaggtgatcacccgtgtccacagagtg
gtgaagaaaattacagtcgcaacctcaggtggtggtgttgtggctccttacattggggat
gatgtgtggaacccttgggaggatgagcaggctaatgcgctttctgctctgcacaaacag
agggaggctttcagacaataccaggagcgcattgacaagaacagacccaagagatacaaa
gttcaaatctgggggaaagcggccataggactttacctttgggaacatattttagaaggt
cccctcaaccccaccgacatacaagcacagtggagagagggggagatacaagtgggaaag
atagatttcagtttctacacaggtccagcggtgatccaaggccatgttcctctggacaca
gacagtgtggttctggtgctgaatggccgggagcagcagaagatctcctacgccacccgg
tggctgcagcatgtccagaccttgatgcagttccacgctgtgaatcgtgtggctgtggtt
ctgctgggcagcgagcgctgcaccaatgactggatcagcccctacctgaggagacacggg
ggctttgtggacctgctcttcctggtctatgacagcccctgggttaacgacaaggatgtc
ttccagtggcccctcggagtagccacatacaggcagtttcctgtggtcatgccaaactcc
catatggtgagctccacaaggcccttcctctgtaacttcctgggaactgtctacaagaac
tcctcgagggaaacgctcatggggatcttgaaacaaaccggactggacaaagagtgcatc
actactggcagagagaagtggcttcctcaggagacagtggagagtctgagacggtaccaa
acagccctggcccaaagcgagctcaccctctgccccgtgggaatcaacacggagtgctac
cgcatctacgaggcctgtgcctatggctccgtacccgtggtggaagacatggtgacccca
ggtgggtgctctgctgcacgcagctccccactgcgtctcctcaaaactgcaggagccccc
ttcatctttctcaaagactggaaggagcttccaggcctcctggaaaaggagaagatgatg
agccaggaggaaaggactgagaggaggaggaaactgctggagtggtatagcagtttccgc
cagcagatgaaggacaggttcaccgaggtcttagaggagaccttcttcaaaaacagctaa
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