Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139407242
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Entry
139407242 CDS
T10872
Name
(RefSeq) monofunctional C1-tetrahydrofolate synthase, mitochondrial isoform X1
KO
K13402
monofunctional C1-tetrahydrofolate synthase, mitochondrial [EC:
6.3.4.3
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla00670
One carbon pool by folate
ocla01100
Metabolic pathways
ocla01240
Biosynthesis of cofactors
Module
ocla_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
139407242
Enzymes [BR:
ocla01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.3 formate---tetrahydrofolate ligase
139407242
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Gene cluster
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Motif
Pfam:
FTHFS
THF_DHG_CYH_C
THF_DHG_CYH
Motif
Other DBs
NCBI-GeneID:
139407242
NCBI-ProteinID:
XP_071006942
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Position
4:complement(72059599..72147916)
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AA seq
971 aa
AA seq
DB search
MRLSTLRHACRNLPTPSVHQPRTGVRVFGLAKSSLPLGPSSNSQLLLRAASSVSGTTSAE
KAPKLGKQTDGPGYENTISFSCRENVQRTKEEMVALQRGHPALKPTLAIIQADEDDRLLE
LNKKMAGKIGLNVTQICLPRECTEDEIIEEVLKLNEDPRVHGVYLHLPPASLTSRVLNTL
RPEKDVDGVSDLNVGRLVRGDMNQGFIPPLANAVMELLARHDTPMEGRTVLVVGGEGPLG
VALQCLMQRRGMVVLHSRRISEVLQKQANAVVLLAAGHMDVPPTWLRPGTAVIHCGSALM
TDHGMEMSVVGPLTAALRMQNVVQSSSRWAQGQQYRPWTLRSLKLQPLSPVPSDIEISRA
QTPKPVDQLAQEIGLLQEETEAYGRTKAKVRLSLLDRLREQPDGKYVVVAGITPTPLGEG
KSTVVIGLVQALSAHLKLNSFACLRQPSQGPTFGVKGGAAGGGYAQVIPMEEFNLHLTGD
IHAITAANNLVAAAIDARMLHEATQKDKALYSRLVPSVNGVRRFSPIQIARLRRLGISEI
DPSALTPQEVSSFVRLDLDPAKVTWQRVVDTNDRFLRKITVGQASTEKGHVRETQFDIAV
ASEIMAILALADGLGDMKTRLGRMVVGSSRSGQPVTAEDLGVSGALAVLMKDAIKPTLMQ
TLEGSPVFVHAGPFANIAHGNSSVLADKLALKLVGEDGFVVTEAGFGADIGMEKFFNIKC
RASGLRPNVVVLVATVRALKMHGGGPNVSAGSPLPREYIDENLSLVVKGCSSNLRKQIQI
AHLFGVPVVVALNVFKTDTQAEIDLVCQMAKESGASDAVPCHHWARGGRGSVELAQAVKQ
AGSQPSHFQFLYSQETPIVEKIRMIAQKVYGADDIELSPEAQAKIDYYNQQGYGKLPICM
AKTHLSLSHLPEKKGTPTGFTLPIRDIRASIGAGFIYPLVGTMSTMPGLPTRPCFYDIDL
DPVTEEITGLF
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atgaggctttctacacttcgccatgcctgccgcaatttaccgaccccatccgtacaccaa
cctcgtacaggagtcagggtgttcggcttggcgaagagttccctaccgctaggtccatcc
agcaacagccagttgcttctccgggctgctagttccgtaagcggcactacctccgcggaa
aaagcgcccaagttaggaaagcaaacggatggaccgggctacgaaaacactatcagtttc
tcttgcagggagaatgttcaaaggaccaaagaggagatggtggctttgcagaggggccac
cctgcactcaaacctacgctggctatcatacaggcagatgaggatgaccgtttactggag
ctcaacaagaagatggctggaaagattggcctgaacgttactcagatctgcttgcccaga
gaatgcactgaagatgagattatagaggaggtgttgaagctgaatgaggatcccagggtg
catggtgtttacctccacctcccccctgcctccctcaccagccgggtcctcaacacactc
agaccagagaaggacgtggatggtgtgtcagacctgaatgtggggaggctggtgcgagga
gatatgaaccagggcttcataccccccctggccaacgctgtcatggagctgctggccaga
catgacacccctatggaggggaggaccgtgttggtggtggggggtgaaggaccccttggg
gtggccctgcaatgcctgatgcagagaagaggtatggtggtcctccacagccggaggatt
tctgaggttctacagaaacaggcgaacgctgtagtcctgttggctgcggggcatatggat
gtccctcccacatggctgagacctgggactgcagtcatccactgtggctccgctcttatg
acagatcatggaatggagatgtctgtagtgggacccctaacagcagccctccggatgcag
aacgtggtgcaaagcagcagtcgttgggcccagggacaacagtacagaccctggacactc
cgcagcctcaagctgcagccactgtcacctgtacccagtgacatagagatctcccgtgcc
cagacccctaagcctgtggaccagctggcccaagagataggcctgctgcaggaagagact
gaggcctatggcagaaccaaagctaaggtccgcctctcactcctggatcgcctcagagaa
cagcctgatgggaaatatgtggtggtggctggtatcactccgacccccctgggggagggt
aagagcacggtggtcattggcctggtccaggcgctctctgcccacctcaagctcaactcc
ttcgcctgcctcagacagccctctcaggggcccacctttggggttaaagggggcgccgcg
ggagggggatatgcccaggtcatccctatggaggagttcaacctccatttgacaggtgat
atccatgcaatcactgcagccaataacctggtggccgctgccattgatgcccggatgctg
cacgaggccacccaaaaagacaaggctctgtacagcagactggtcccctcagtgaatgga
gtcaggcgcttctctcccatacagattgccaggctacgtcgtttgggcatcagtgagatt
gaccccagtgctctcacgccccaggaggtcagctcctttgtccgtctcgacctcgacccc
gccaaggtcacctggcagagagtggttgataccaacgatcgtttcctgaggaagataact
gtaggacaggccagcactgagaaaggacatgtgcgagagacccagtttgacatagcggtg
gccagtgagatcatggctatcctggccctggctgatggactgggggacatgaaaaccaga
ctgggacgtatggtggtgggcagcagccgcagtggacagcccgtcacagcagaggacctg
ggtgtgagtggagcacttgcggtgctcatgaaggatgccatcaagcctacccttatgcag
accctagaaggttctccagtgtttgtccacgcggggccatttgccaacatcgcccatggc
aactcctcggtgctggcagacaagcttgcattgaagctggtaggagaggacggatttgta
gtgactgaggctggtttcggggcagacatcgggatggagaagttcttcaacatcaagtgc
agggcctctgggctgaggcccaacgttgtcgtcctggtcgccacggtcagagcattgaaa
atgcatggaggtggtcccaatgtctcagctggctcacctctaccaagagagtacatagat
gagaacctgagtttggtggtgaagggctgcagcagtaacctgaggaaacagatccagata
gcccacctgtttggagtccccgtggtcgtggctctcaacgtcttcaagaccgacacccag
gctgagatcgacctggtgtgccagatggccaaggagtctggggcgtcagatgccgtgccg
tgtcatcactgggcgcggggtggccgtggctcggtggagctggcccaggcagtgaagcag
gccggcagtcagcccagccacttccagttcctctacagccaagagacccccatagtggag
aagattaggatgatagcccagaaggtgtacggggctgatgacatcgagctgtctccagag
gcccaggccaagatagactattacaaccagcagggttacgggaagcttccaatctgcatg
gccaagacccacctgtccctgtcacacttgcctgagaagaagggcacgcccactggcttc
accctgccaatcagagacatccgcgccagcatcggggcaggattcatctacccattggtg
ggaacgatgagtactatgccaggcctgcccacgcgaccctgtttctatgacatcgacctc
gacccagttacagaggagatcactgggctcttctga
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