Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139407390
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Entry
139407390 CDS
T10872
Name
(RefSeq) actin, alpha cardiac muscle 1a
KO
K12314
actin, alpha cardiac muscle
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04260
Cardiac muscle contraction
ocla04261
Adrenergic signaling in cardiomyocytes
ocla04814
Motor proteins
ocla04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
139407390
04820 Cytoskeleton in muscle cells
139407390
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
139407390
04261 Adrenergic signaling in cardiomyocytes
139407390
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ocla04812
]
139407390
04147 Exosome [BR:
ocla04147
]
139407390
Cytoskeleton proteins [BR:
ocla04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actins
Actins
139407390
Exosome [BR:
ocla04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
139407390
Exosomal proteins of bladder cancer cells
139407390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Actin
Motif
Other DBs
NCBI-GeneID:
139407390
NCBI-ProteinID:
XP_071007237
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Position
4:85335808..85343332
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AA seq
377 aa
AA seq
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MCDDDETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA
QSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREK
MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRL
DLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEK
SYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETAYNSIMKCDIDIRKDLYANNV
LSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS
KQEYDEAGPSIVHRKCF
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgacgacgatgaaactactgccctcgtgtgcgacaacggctctggcctggtcaag
gctgggttcgccggtgatgacgctccccgcgctgtgtttccatccatcgttggacgcccc
cgtcaccagggtgtgatggtgggaatgggacagaaggacagctatgtgggagacgaggct
cagagcaagagaggtatcctgactctgaagtaccccatcgagcacggcatcatcaccaac
tgggacgacatggagaagatctggcaccacaccttctacaatgagctgcgtgtggctcct
gaggagcaccccaccctgctcactgaggcccccctcaaccccaaggccaacagggagaag
atgacccagatcatgtttgagaccttcaacgtccccgccatgtacgtggccatccaggcc
gtgctgtccctgtacgcctccggtcgtaccaccggtattgtgctggactcaggtgatggt
gtgacccacaacgtgcccatctatgagggttatgctctgccccacgccatcatgcgtctg
gatctggcgggtcgcgacctcactgactacctgatgaagatcctgacagagcgtggctac
tccttcgtgaccaccgccgagcgtgagatcgtgcgtgacatcaaggagaagctgtgctac
gtggccctggactttgagaatgagatggccaccgctgcctcctcctcctctctggagaaa
agctatgagctgcctgacggtcaggtcatcaccattggtaacgagcgtttccgttgccca
gagaccctcttccagccttcctttattggtatggagtccgctggtatccatgagaccgcc
tacaacagcatcatgaagtgtgacattgacatccgtaaggacttgtacgccaacaacgtc
ctgtcaggaggtaccaccatgtaccctggtattgctgaccgtatgcagaaggagatcacc
gctctggccccaagcaccatgaagattaagatcatcgctccccccgagcgtaagtactcg
gtctggatcggcggctccatcctggcctctctctccaccttccagcagatgtggatcagc
aagcaggagtacgacgaggcaggcccctccatcgtccacaggaagtgcttctaa
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