Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139407879
Help
Entry
139407879 CDS
T10872
Name
(RefSeq) thyrotropin receptor-like
KO
K04249
thyrotropin receptor
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04080
Neuroactive ligand-receptor interaction
ocla04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
139407879
04081 Hormone signaling
139407879
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
ocla04030
]
139407879
G protein-coupled receptors [BR:
ocla04030
]
Rhodopsin family
Peptide
Thyrotropin
139407879
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
LRR_8
LRR_5
LRR_4
Motif
Other DBs
NCBI-GeneID:
139407879
NCBI-ProteinID:
XP_071007852
LinkDB
All DBs
Position
4:complement(83508565..83572336)
Genome browser
AA seq
793 aa
AA seq
DB search
MTENDRHSLQVITCALFTLVTLPIETLVDFDSCPTVCDCSERKTYTISCFDIDVIPTFPA
STDTLWLLETRLKSVPGDVFSNLVNISRIYISVDLTLKRLEKHSFYNLKKITHIEIRNAR
SLSYIDPEAFKKLPNLKYLGIFNTGLTIFPDLTNIHSDDMNFILEITDHPYISEVPANSF
RGITNQVLTVMLYSNGFTDIQHHAFNGTKLDAVYLHRNRRLTRMDENMFSGTVSGPILLD
VSLTAVSSLPTAGLESLRELMARSAWNLKKLPPIKTFKHLTSADLTYPSHCCGFKNLKKK
RGYLEYIICNLTAFYEQQQKSSVGPLTVPSLQGDPTADTADQEPSEEGFRDGVFKETQGD
PWRDFHSSLNYHAYFGGQPDDDVGFGEMLKNPQEDTSQNFDNRYDYVVCEEGEEVTCAPA
PDEFNPCEDIMGFSFLRVSVWFVSLLAVVGNVVVLLVLLTSHYKLSVSRFLMCHLAFADL
CMGIYLLLIASVDLHTKMEYYNHAIDWQTGPGCGLAGFLTVFASELSVYTLTVITLERWY
AITFAMRLDRKLRLPHATAVMLAGWFFCLLLAMLPLVGVSSYQKVSICLPMDTKSTMAQV
YIISVLILNILAFLVICTCYMKIYCAVHNPYYCPGSKDTNIAKRMAILIFTDFLCMAPIS
FYAMSAVVDRPLITVSNSKILLVLFYPLNSCANPFLYAIFTKAFRGDIFILLSKVGLCQR
RAQLFRGQAVSSKGSSRVCQQVQGGKKRDTNRKRTGGPEEVPIHLQEYSGSGHTYIQLAS
QQTSPEESRSLET
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atgactgaaaacgacagacacagtttgcaggtgataacatgtgcgctgtttaccctcgtc
acgttaccgatcgaaaccttggttgacttcgactcctgccccacagtttgtgattgctca
gaacggaagacctacacgatctcctgctttgacattgatgtcattcccacatttcctgca
agcacagatacactatggcttctggagacgcgtctgaaatcagtgccaggagatgtcttc
tccaacctagtaaacatatcaaggatatatatatccgtggatctgacgctgaagaggctg
gagaagcattcattctataacctgaagaaaatcacccacatagagatccggaatgcgagg
agtctgtcatacatagatccagaagcatttaaaaaacttccaaacctgaaatacctgggt
attttcaatactggcctcaccatcttccctgatctcaccaacattcactcagatgacatg
aacttcatacttgagatcactgatcatccttatatctctgaggtcccagccaactcattc
cgcggtattaccaaccaagtgctgacagtgatgctgtacagtaatggcttcacagacatc
caacatcatgctttcaacgggaccaaactagatgctgtgtacctccatagaaacaggcgt
ctgaccaggatggatgaaaatatgttttctggcactgtcagtggcccaattcttcttgac
gtgtccctgacggcggtgtcgtccctccccacggcagggctggagtctctcagggagctg
atggcccgcagcgcctggaacctcaagaagcttccgccaatcaaaaccttcaaacacctg
accagcgctgacctcacctacccctctcactgctgcggcttcaagaacctcaagaagaaa
cgaggatacctggagtacatcatctgtaacctgacagcattctacgagcagcagcagaag
agttccgtaggtcctctcacagtcccatccctccagggagaccccactgcagacacagct
gaccaggagcccagtgaggagggcttcagagatggtgtattcaaagaaacccagggagac
ccctggagagacttccacagcagcctcaactaccatgcctacttcggtgggcagccggac
gatgacgtgggcttcggggagatgctgaagaacccacaggaggacaccagccagaacttt
gacaatcgctacgactacgtggtctgtgaggagggcgaggaggtgacctgcgcccctgca
cccgacgagttcaacccgtgtgaggacatcatgggcttcagcttcctgcgtgtgtctgtg
tggtttgtgtctctgctggctgtagtaggtaacgtggtggtgctactggtcctcctcacc
tcccactacaagctctccgtctcacgcttcctcatgtgtcacctggccttcgctgacctc
tgcatggggatatatctcctcctcatcgcctcagtggaccttcacaccaagatggagtac
tacaaccacgccatcgactggcagacggggccgggttgcgggttggcggggttcctcacg
gtgttcgccagcgagctgtcggtttatacgctgacagtgattacgctagagaggtggtac
gcaataacgttcgccatgaggctggacaggaagttgcgtctgccccacgccactgctgtg
atgctggctggatggtttttctgcctcctcctagcgatgctccccctagtgggggttagc
agctaccagaaggtcagtatctgcctgcccatggataccaagtccaccatggcccaggtc
tacatcatctcagtcttgatcctaaacatcctggcattcctggtgatctgtacctgttac
atgaagatctactgcgctgtgcacaacccttactactgcccagggtctaaagacaccaac
attgccaaacgcatggccatcctcatcttcactgacttcctgtgtatggcgcccatctcc
ttttatgccatgtcagccgttgtggaccggccgcttatcaccgtgtccaactctaagatc
ctactggtgctcttctaccctctcaactcctgtgccaaccccttcctgtacgccatcttc
accaaggctttcaggggggatatctttatcctgctcagtaaggtggggctgtgccagcgt
cgggcgcagctcttcagagggcaagcagtcagttcgaagggtagcagtagggtgtgccag
caggtccaggggggtaaaaagagagacactaacaggaagaggacaggaggaccagaggag
gtacccattcacctgcaggagtattctgggtctggtcacacctacattcagctggcctca
caacagaccagtcctgaggaaagccgtagcctggaaacttga
DBGET
integrated database retrieval system
