Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139408320
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Entry
139408320 CDS
T10872
Name
(RefSeq) hydroxymethylglutaryl-CoA synthase, cytoplasmic isoform X1
KO
K01641
hydroxymethylglutaryl-CoA synthase [EC:
2.3.3.10
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla00280
Valine, leucine and isoleucine degradation
ocla00650
Butanoate metabolism
ocla00900
Terpenoid backbone biosynthesis
ocla01100
Metabolic pathways
ocla03320
PPAR signaling pathway
Module
ocla_M00095
C5 isoprenoid biosynthesis, mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
139408320
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
139408320
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
139408320
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
139408320
Enzymes [BR:
ocla01000
]
2. Transferases
2.3 Acyltransferases
2.3.3 Acyl groups converted into alkyl groups on transfer
2.3.3.10 hydroxymethylglutaryl-CoA synthase
139408320
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Motif
Pfam:
HMG_CoA_synt_C
HMG_CoA_synt_N
PS_Dcarbxylase
Motif
Other DBs
NCBI-GeneID:
139408320
NCBI-ProteinID:
XP_071008158
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Position
5:complement(10113405..10127015)
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AA seq
549 aa
AA seq
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MIVSLRIEDLLDSLDPRYIDLLHPNSSYRMPGSAPANGEATWPKDVGVIALEIYFPSQYV
DQAELEQFDGVSAGKYTVGLGQARMGFCSDREDINSLCLTVVQRLMERNGLSYDQVGRLE
VGTETIIDKSKSVKTVVMQLFEESGNTDVEGIDTTNACYGGTAALFNAVNWVESSSWDGR
YALAVAGDIAVYATGSARPTGGAGAIAMLVGPNAPLAFDRGLRGTHMQHAYDFYKPDMAS
EYPVVDGKLSIECYLSALDRCYSVYRNKIHAQWQREGVDKRFSLEDFGYMVFHSPYCKLV
QKSLARLVLSDFLSHPRSNTETGPFSGLEAFREVKPEETYFNRDVEKAFMKASTEMFDQK
TKASLLVSNQNGNMYTPSVYGCLASVIAQHTPQHLAGQRIGLFSYGSGFAATLYSLRVSQ
DATPGSGLDKLCASLCDLKARLDSRRKVSPAMFAENMQLREETHHLAPYVPQGAVEELFP
GTWYLTRVDEKHRREYSRRSLNDDLPLEAGLVNSTTATEQHIPSPVKKMPRLPASTAGPE
AVTVSNGDH
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgattgtaagcctccgcatagaagacctgctcgacagccttgatcctcgctacattgac
ctccttcaccctaacagctcatacagaatgcctggatcagccccagccaacggcgaggcc
acgtggcccaaagatgtgggcgtcatcgccctggagatctacttcccctcacagtacgtg
gaccaggccgagctggagcagtttgacggcgtgtcggccggcaagtacacggtgggccta
ggccaggcgcgtatgggcttctgctcggaccgcgaggacatcaactccctttgcctgact
gtggtccagcggctgatggaaaggaacggcctctcctacgaccaggtgggccgtttggag
gtgggcactgagaccatcatcgacaagtccaagtcggtgaagacggtggtgatgcagctg
ttcgaggaatcgggcaacacggacgtggaggggattgacacgaccaacgcttgctatggg
ggcaccgccgccctcttcaacgccgtcaactgggtggagtctagctcctgggacggtcgt
tatgccctggcggtggcaggagacattgcagtttacgccacaggaagtgcccggccgaca
gggggcgccggtgcgatagccatgttggtagggcccaacgccccactggcttttgacaga
ggtctgcggggtacacacatgcagcacgcctacgacttctacaagccagacatggcgtca
gaataccctgtggtggacggaaagctgtctatcgagtgctacctcagcgcgttagatcgc
tgttactctgtctaccgcaacaagatccatgcacagtggcaaagagagggtgtggacaag
cgtttcagcctggaggactttggctacatggtgttccactctccctactgcaagctggtg
cagaagtccttagcccgtctggtgctcagtgacttcctcagccaccccaggtccaacaca
gagactggaccattcagtggcctggaggctttcagggaggtgaagccagaagagacctac
ttcaacagggatgtggagaaggccttcatgaaggccagcacagagatgtttgatcagaag
accaaggcttccctcctcgtctccaaccagaacggcaacatgtacaccccctctgtctac
ggctgccttgcttctgtcatcgcacaacacacacctcagcacctggcgggccagagaatc
ggcctgttctcttacggctcagggtttgccgccacactctactctctccgagtctcccag
gacgccacgcctggctctggattggataagctctgtgccagcctgtgtgacctcaaggcc
agactggactccaggaggaaggtgtcacctgccatgtttgctgaaaacatgcagctgagg
gaagagacccaccacctagcaccgtacgtgccccagggcgctgtggaggagctgttccct
gggacgtggtatctgacccgggtggatgaaaagcaccgtcgggagtactccagacgctcc
ctgaacgacgacttgcccctggaggctggcctggtcaactccaccacagccactgagcag
cacatcccaagcccagtgaagaagatgccccgcctccccgcctccacagctggtcctgag
gcggtcaccgttagcaatggggatcattaa
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