Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139408544
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Entry
139408544 CDS
T10872
Name
(RefSeq) dimethylglycine dehydrogenase, mitochondrial
KO
K00315
dimethylglycine dehydrogenase [EC:
1.5.8.4
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla00260
Glycine, serine and threonine metabolism
ocla00670
One carbon pool by folate
ocla01100
Metabolic pathways
Module
ocla_M00974
Betaine metabolism, animals, betaine => glycine
Brite
Enzymes [BR:
ocla01000
]
1. Oxidoreductases
1.5 Acting on the CH-NH group of donors
1.5.8 With a flavin or flavoprotein as acceptor
1.5.8.4 dimethylglycine dehydrogenase
139408544
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Gene cluster
GFIT
Motif
Pfam:
DAO
GCV_T
GCV_T_C
FAO_M
Pyr_redox_3
FAD_binding_3
NAD_binding_8
FAD_binding_2
Pyr_redox_2
NAD_binding_9
Thi4
SoxG
Pyr_redox
HI0933_like
ApbA
TrkA_N
Lycopene_cycl
Motif
Other DBs
NCBI-GeneID:
139408544
NCBI-ProteinID:
XP_071008655
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Position
5:22109314..22138735
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AA seq
868 aa
AA seq
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MSRFFNAINTHLRRDFAAYRAIVCIPLRTISYTSQKHVGNGDSTMVLGKRWKDAAETVII
GGGCVGVSLAYHLAKAGQKDVVLLEKSELTAGSTWHAAGLTTYYHPGINLKKVHYHSIKL
YESLEAETGQAVGFHQPGSIRIASTPVRVDELKYQMARTHWHPTPQWLITPEKIKELFPL
LNMDKVLAGLYNPGDGHIDPYSLTMALAAGARMYGAQIYNPALVSGLTPTSDGKWDVQTP
HGTIRANRIVNATGFWAREVGQQIGFDHPTIPVHHQYVVTATVPEVKALKAELPVIRDLE
GSYYLRQERDGLLFGPYEKEEKMVLQDSWVRDGVPPGFGKELFESDLDRIMHHVEMAMEM
VPVLKNADIINIVSGPITYTPDLLPMVGPHQGARNYWTAIGFGYGVIHAGGIGKFLSDWI
VTGEPPYDLIECDPNRYGKWTTVPYLCAKARESYGFNNVVGYPKEERFAGRPTNRTSGVY
ELLKGKASMGFHAGWEQPHWFYKPGDNAGYKPSFRRTNWFGPVGRECKLVMEKVGVVDLT
PFGKFIVKGKDSHKLLDRLFANTMPKVGLTNISHMLTPTGRVYAEVTITQLTPGEFLLIT
GSGSELHDLRWMEKEVAEGAYDVDISNVTEEIGVLGVAGPKARDVLQKLTQEDMSDASFK
FLHCKPIQLGGINLRAIRISYTGELGWELYIPHKDMAAVYQAIMAAGEDEGIDNFGTYAM
SSLRLEKGFRGWGAEMNCDTNPLEAGLDYFIKLNKHADFIGKAALQEIKAKGLKRKLSYI
TMETDDVDPEGNETIWLNGKVVGNTTSGAYSYTTQQSLAFAYLPVELCSVGQKVEVEMLG
RKYPAMVVQEPLVLTEPTRTRLQKKSKA
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atgtctaggttttttaacgcaattaatactcacctccggagagattttgccgcatatcgc
gctattgtctgtattccactgcgtacaataagctacacttcgcagaaacatgtgggaaat
ggggacagcactatggtcctggggaagaggtggaaggacgcggctgagacggtgatcatc
ggagggggctgtgttggagtcagtctggcctatcacctggccaaggctggacagaaggat
gtggtcctgctggagaagtctgaactgactgctggatccacctggcacgctgctggtttg
accacgtactaccaccctggtatcaacctgaagaaggtccattaccacagcatcaagctg
tatgagagtctggaggcagagacaggacaggcggtgggtttccaccagccaggcagtatc
cgtattgcctccaccccagtcagagtggatgagctgaagtaccagatggcaagaacccac
tggcaccccacgcctcagtggctcatcacccctgagaagatcaaggagctcttccccctg
ctcaacatggacaaggtgctagcgggtctatataacccaggagacggccatattgacccc
tactccctaaccatggctctggctgcaggggcccgtatgtatggagcccagatctacaac
ccagccctggtctctggcctcacacccaccagtgatgggaagtgggatgtccagacccca
cacgggaccatcagagctaaccgcatagtcaacgccacaggtttctgggcccgggaagtt
ggccagcagattggctttgaccaccccactatccctgtccatcaccagtatgttgtcacg
gcaacggtgcctgaggtaaaggcactaaaggcagagctgccagtgatcagggacctggag
ggttcctactacctcagacaggagagagatggactgctgtttggaccctatgagaaagag
gagaagatggtgctgcaggactcctgggttagagatggagtaccaccaggttttggtaag
gagttgtttgagtcagacctggatcgtatcatgcaccacgtagagatggccatggagatg
gtgcctgtgctgaagaatgctgacatcatcaacattgtatctggaccaatcacctacacc
cctgacctccttcctatggtcggaccgcaccagggagcacgtaactactggaccgctatc
ggcttcgggtatggagtgatccatgccggtggcattgggaagttcctcagtgattggatc
gtgacaggggaacccccctatgacctcattgagtgtgaccccaaccggtatggaaaatgg
accactgtaccctacttgtgtgccaaagccagagagtcctatggattcaacaacgtggtg
ggctaccctaaagaggagcgttttgctggccgtccgaccaacaggacgagtggtgtgtat
gagctgctaaagggaaaagcttccatggggttccacgccggctgggaacagcctcactgg
ttctataagcctggagacaatgccggttacaagcccagtttcaggcgtaccaactggttc
ggtccggtggggagggagtgtaagctggtgatggagaaggttggggtcgttgacctgaca
cccttcggcaagttcattgttaaagggaaagattctcataaactgctggacagactgttc
gccaacactatgcccaaggtgggcctgactaacatcagccacatgttgacccccactggg
agagtctacgctgaggtcaccattacccagctcacacctggagagttcctcctcatcaca
ggatctggatcagagctgcatgacctcaggtggatggagaaggaggtagcagagggggcg
tatgatgtagatatttccaacgtgacagaggaaattggggtgttgggtgtggctggacca
aaggctagagatgttctacagaaactcactcaggaggacatgagcgatgcaagctttaag
ttcctccactgcaaacccattcaactgggtggcatcaacctcagagctatcaggatctcc
tacacaggtgagttgggctgggagctgtacattcctcacaaggacatggcagctgtgtac
caggctatcatggcagcaggagaggacgagggcatcgacaactttggtacctacgccatg
tcatcactacgactggagaaaggcttcagaggctggggtgcagagatgaactgtgacacc
aaccccctggaagctggtctggactacttcatcaaactcaacaagcatgctgacttcatc
ggtaaggcagcgctgcaggagataaaagctaaaggtctgaagaggaagctgtcatacatc
accatggaaacggatgatgttgaccccgagggcaacgagactatctggctcaatggcaag
gtggttggtaacactacatctggggcctacagctacaccacgcagcagagcctggcgttt
gcctacttgccagtggagctgtgttctgtagggcagaaggtggaagtggagatgttgggg
aggaagtaccctgccatggtggtccaggagccactggtcctcacagaaccaaccaggacc
cggctgcagaagaagagcaaggcatag
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