Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139408774
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Entry
139408774 CDS
T10872
Name
(RefSeq) ciliogenesis and planar polarity effector 1 isoform X1
KO
K22859
protein JBTS17
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ocla03037
]
139408774
Cilium and associated proteins [BR:
ocla03037
]
Primary cilia and associated proteins
Ciliogenesis and planar polarity effectors (CPLANE) complex
139408774
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Joubert
Motif
Other DBs
NCBI-GeneID:
139408774
NCBI-ProteinID:
XP_071009181
LinkDB
All DBs
Position
5:37464586..37496227
Genome browser
AA seq
3311 aa
AA seq
DB search
MELKLEVVLSSSIKRKKPWPRFCWLGLEKESVFLLDDKRISEINMVSGHTKKKTPKLQPL
LPRVVTMAASQNGVWLAGLLVSGEMFLWSRDKDFLKTVAAVPTEAQLVTAAQGSGVCLSL
VVSGDGMRVLLLTVTGQVFLWECVDVRDLSGVRDGTARGRWAQIQHPGNTALPSPKDKEA
SQHSIFVRGEAVGDICLSAFVFTSEVELSVTFLKIQWEEGQRSSPVGYSVRWVTKTYPMS
CLTPPCRPVRSRGSLVPAFSPDGLLLAVVLNQRDPRATQVLFVSTQNFVIVSSGLGGCGS
KKLVIPSKYVRSYWVGSVSWAAGGLYLACVLKRGSFLMLARLGGLLSLSTSGCSVDFGPA
HFLPLHPLVTYRPPVSVGGAGVDPLSSSSLSVRDVLRQRYSVTWHPRLPYLIVSDGYMAT
VLRVPEQPSPATLLRALLHDTSQGLESASRALERTQPHARAWLESISCLNPSSSLQELRA
RPTPVPTPTATATSTLPLFLQDQGDLGDTRELIQRVQALFEDDSDLEGPPAGSHVEDHGR
LEFASMFDTLHALSDTLADLDPSSRPDPDASSADSERSPPALPPELREVHASLLTAWALG
VSLGGVMEQRERLLKYTVRCAVRFAALLRLISIPSSHTGKRKNSTIPFSSRLLHLLRTLL
SFLPWGAPHTGGRSCLGLVVELTQQLVGLLLSSPPDLSQTGQASSEPSSQTLSTALLLLQ
LTSHSMDHTYSLQQKCAHTDVYCVLFLQEEGRGPSQQDLPLPQWPSSRLWGVWRAVYRHT
LQYWEELKYRRSGTGWEEEQGRVSVILSQIQTALQGMGERLEEGPTLLSYTGEQHFLFGS
YSESAQTWRAELWAERERDGPRSAFLETRLLLSLLYGLLFQYRLKEAQGLGDHMARLLLH
QTGPHGDDSAHNTEEALPGSWLPGEVHREAACAVVQTLGRFMALYFTNQPLLILPPHSVD
VLPPLHLPHAPGVGRLVPLCQEGVAGAVRGQQLSEVWTVGYALDLLLQGGLLPEATWLAH
RLGDWKTAVSLGLAYTTYSTEHCDFTGLRWRELHLPAALEPVSLFQGQLESLLGRKARSE
ETQGDEESYKSFTDSLEGEDVELLQGSVQEILKASVMAGVDVLSQPLGALLDSAKDLSSC
LPALVPMGLYLPAPPLYCPQPAPNTQDPSGGFGQLLEGASRHRVSGVLQRVLLLLRSARC
SRPAAQWYISHLRRSRHRLDKIRQKYSQQQCVTKAFPEALMKFVTRSGFFRLGPSGDGTM
DSVTIQTIICFRELCGLCWMLNVRDQLSMSCRKYQAARNHGRDPQVPADDSKVTAACEEA
LHWACRFLPFSRFLNAEEILQDTLLSLVSELPPVPLVAETLVQAFPEEEESVRVPLREKY
NSLLRRLRHCTVPASGQNGEKRDEEEGEEVMMILVQERLRQRRKDLKRLARHLAPLELYL
WEREEEQDRGGGGQGALALLERFSLGASLSNSTLTDCGRPLVYSDGDTAENSVALSPDLH
SRPPHSISKRVRVQDRADKPGSQVEVVEGGSTQEEEQSCTGPAQDPAVGEDSPSLTLPVV
GTWEFELEDAEYLRFLELFLSYVLEKDGPDPDAGCDPPLLKGFCSQLRERELHSLTFDVL
TTLRRRQRDGRQATRRQGGSDAPVFRAGHCYKPVLVTNPLFLHSEPPTPRPSMSVSVLSL
PGLRTGRQQGLFGFSLQARSASPAPEPAPQRSRLGSKSSPSQSSVPWEQPSEGWAFGPLC
SVEAVELQQEMEPKLEAQFPGLGRLLEWMVRWADKRVLLGQPSRMKEREAGGGEVAGGGV
VIRVKASAPAVLTALNMLEHRYTAALLGMDHYSANLQVPERQWTVAPVLQPEVGWKLERE
SSVDTGYPASAGTPITLPDQDPQHCELSYGSQTEGVERVTSQETSQLSDPVGVNLNPESG
VSDFPDNKCDLSAEKGEDSNADEALRSSASLAILNISVHIKSLRPTLSPPGQALTLADLR
CSEREENIVSSQEEEAENLLSHGSLRRPSDITEEVTRNITLSEGSGSDGPPNASFQPLPG
AGPQAGAQVADSAPNGGLPQGSTNTTPAPASAPNQTLPAQTDPVRQLLQDELFRLVQLQQ
INFMSLMQVVGASFVNLPVSQNNTLPAQSNVPYPHPNTPLSHPNTLLPHLNLTPSQNNMS
PMPQTQSSVQAPLASEPLSGGHGPTDQPPIHEMQPLAVHPEPLRDIQGQTRTLISSSHGI
QTTVDPTCSAPLLLPFGGSSQVSAPYSSGLKLLQLHPPLLSLQRHGKTAPVREAWGPPSE
RRPSTAVPPHLNPSQYDPAALGRAEERSREAERESTAPPSHLNLTQYAHYPSNQAPRNTL
PLLQNPETRVERSRGAEPRHLPPTLPSHRPPPVHGLPLLRFHPDPRPPTTFALIPLPHSS
RPLTVTPAAMGHNPRLQLLQRDPDPPRMMLPEATPPACVPHLIPLGELMGWAAGRQRGAE
ARLQLLRVDPQAQNPTPATPSTSTNSSRRQKRRVERLRREGEKAEITFRPEDSIILPLEC
NEDEPAEPVLGEGYVFPLGTFDSVLTGQGLVDKALSTAAELHAFASTHKRPPESHDACTN
TDPASPHSDTGISAQPTVTSAASGPAALPPELFLNLRFPRDPPVHDTETSGEKRPERNTG
RQFIHVIDLEDGALLQELPSCPRPAVRDHDVTPSQPSPPTSAQLHLLAASVINSAPSELT
ADTSTEDDQPQAQPSGLSQCFSVASLPPAHPEPSGDPVTRSLLQERRAPSRSLETHRGAP
SRAPVIQVAARLSEMDAQLAALQNIADHMEREFANTRLLVSTIETLRPAMAPERVEGRTP
VNKTVTLAVSPEGWRSRLSVHHDPELAGLCQEEEEQEEGPDSVVVSSAPWGVKQPSSLSP
HAHAVQSTSTLHQPTPTGLWLSPVRPEPEQRVWDMGQDLTDTMDGAPGTWAEETLGLSGL
SDVADILTELVRGGGISPTALGLSHTQAARLNSSDVFVIDSRLDQQQSGRAGQRGMRAEE
ERRELRVWMRRKQREKLVEYRRQREEKRERERKPFSTPVTLKPTSKDININKKIKEEKDK
TVLLEHHNQRARDACSLITDLLTTPLTLPTNANRTLNLPSTSSRPSSTRPLTAQTVGSTR
SSPRGRSLSVGGRRRTSTKPQTGRARSLSSPGVTPRSERRPASSGGQETLTSRLGLHRPA
SFLPGDRLSHVTRRGMITDLRGRTGTGPMTPSQQEWRREVIQSSSGRRGGGAREQRETEE
REEEVVSPWNPPPEICRLLGLENSEGQGGVVARAGGAGLDRLDTLSESTGSILSKLDWAA
IESIVASEGAI
NT seq
9936 nt
NT seq
+upstream
nt +downstream
nt
atggagctgaagctggaggttgtgttgtcatcgagcatcaaacggaagaaaccatggcca
cggttctgttggctcggattggagaaggagtctgttttcctgctagatgacaagcggatc
agtgagatcaacatggtgtctggacacaccaagaagaagacccccaagctgcagcccctg
ctccccagggtggtaaccatggccgcatcccagaacggtgtgtggcttgccggattgctg
gtctcaggagagatgtttttatggagcagggacaaagacttcttgaagaccgtggcagca
gtcccgacagaagctcagctcgtcactgcagcacaagggtctggcgtgtgcctgtctctg
gtagtttcaggggatgggatgcgggtgctgctgttgactgtgacagggcaggtgttcctg
tgggagtgtgtggacgtgcgtgacctgtcaggggtacgggatggtactgctagaggacgc
tgggcacagatacagcaccctggaaacactgctctgccatccccaaaggacaaggaggca
tctcaacacagcatcttcgtcagaggggaggcagtgggcgatatctgcttgtcagctttt
gttttcacctcggaggtggagctaagtgtcactttcctaaagatccaatgggaggagggt
cagaggagcagtcctgtggggtacagtgtacgctgggtcactaagacataccccatgtcc
tgcctcacaccaccctgtcgtccggtgaggtccagggggtcactggtgccagccttctcc
cctgatggcctgctgttagctgtagtcctgaaccaaagagacccaagggctacgcaggtt
ctctttgtcagcactcagaactttgtgattgtctccagtggactggggggatgtggcagc
aagaaactcgtcattccttctaaatacgtgaggtcgtactgggtgggcagtgtgagctgg
gctgcgggagggctctacctggcctgtgtgctgaagaggggctccttcctcatgctggct
cgtctgggggggctgctctctctgtctacctcagggtgcagtgtggactttggccctgct
cacttcctgcccctgcatccgctagtcacttacagacctccagtctctgtcggaggggct
ggggttgaccctctgtccagctccagcctgtctgtacgggatgtcctgagacagcgctac
tcggtgacctggcacccgcggctgccctacctcattgtgtctgatggctacatggccaca
gtgctgcgggtccctgagcagccctcccccgccactctcctcagggctctgctgcacgac
accagccagggcctggagagtgccagccgggcactggagcgaacacagccccatgccagg
gcgtggctggagtccatatcctgtctgaatcctagtagcagtctgcaggagctgagagcc
aggcccacacctgtacctaccccaacagccacagctacatccaccctgcccctcttcctg
caggaccagggagacctgggggacaccagggagctgatccagagagttcaggctttgttt
gaggatgactctgatcttgaaggaccgcccgctggttcacatgtggaggaccacggtcgg
ctggagtttgcctccatgttcgacaccctccatgccctctcagacaccctggctgatctt
gaccccagttctcgccctgaccctgatgctagctctgcggactcagagaggagtccccca
gccctccctcctgagctccgggaggtccacgccagcttgctgacagcttgggctctgggt
gtgtcattaggtggcgttatggagcagagagagcgtctgctgaagtacacagtccgctgt
gcggtccgcttcgctgctctcctccgtctaatttccatccccagctcccacacgggaaag
agaaagaacagcaccattcccttctcttcccgcctcctccacctcctcagaacccttctc
tctttcctcccctggggtgcccctcacacaggggggaggagttgcctgggtttggttgtg
gagctaactcaacagctagtgggcctgctcctctcctcgccccctgacctctctcagact
ggccaggctagctctgagccctcctcccagaccctgtccacagctctgctcctcctgcag
ctgacctcccacagtatggaccacacctacagcctccagcagaaatgtgcccacacagat
gtctactgtgtgctattcctgcaggaggagggaagagggccatcacaacaggatctgcct
ctcccccagtggccctctagcagattgtggggagtgtggcgtgcagtgtacaggcacacc
ctgcagtactgggaggagctgaagtaccgtaggagcggtacgggctgggaggaggagcag
ggccgtgtgtctgtcatcctgtcccagatccagacagctctacaggggatgggagaaagg
ctggaggaagggcccactctgctgagctacacaggggaacagcacttcctgtttggttcc
tactcagagagtgctcagacttggagagctgagctgtgggcagagagagagagagatggg
cctcggagtgcattcttggagacacgtctgttgctgtccctgctgtatggactgctgttc
cagtaccgtctgaaagaggcccaggggctgggggaccacatggcccgtctgctactccat
cagactggaccacatggggacgatagtgcccacaacactgaggaggctcttcctggctcc
tggctgcctggagaggtccacagggaggcagcctgtgctgtagtacagactctgggaagg
ttcatggccttatatttcaccaaccagccccttctcatcctgccccctcacagtgtggat
gtactgcctcccttacacctcccccatgccccaggtgtagggcgcctggtgcccctgtgc
caggagggtgtggcgggggcggtgcggggtcagcagctgtcagaggtgtggacggtgggc
tatgccctggacttgctgctacagggggggctgctgccggaggccacctggctggctcat
cgtctgggggactggaagactgcagtctccctgggcctggcctacaccacctactccaca
gagcactgcgacttcaccgggctcagatggcgagaattacatctcccagcagcccttgag
cctgtgagcctctttcaaggtcagctggagtctctactgggcaggaaggccaggtcagag
gagacccaaggagatgaggagagctacaagagcttcacagactctctggaaggtgaggac
gtggagttgttgcagggttccgtgcaggagatcctgaaggcatcagtcatggctggggta
gatgtgttgtcccagcccctgggggctctactggactcagccaaagacctgtcctcctgc
cttcctgctctggtgcctatgggcctgtacctgcctgcacctccactctactgcccccag
cctgcacccaacacacaggatccgtcagggggatttgggcagctgttggagggggcgtcc
cgtcacagggtgtcaggggtcctccagagggtgctgctgctcctgaggtctgctcgctgc
tcccgtccagctgcccagtggtacatcagccacctgcgacgctcccgacatcgcctagac
aagatccgtcagaagtactcccagcagcagtgtgtgaccaaggccttcccagaggctctg
atgaagtttgtgacccgcagtggattcttcagactaggacccagtggggatggaaccatg
gactctgtcactatacaaactatcatctgcttcagggagctgtgtggcctgtgttggatg
ctgaatgtcagagaccagctctcaatgtcttgcaggaagtatcaggctgcaaggaaccat
gggagagatccccaggtcccagcagatgacagcaaggtgaccgcagcctgcgaggaggct
ctccactgggcctgtcgtttccttcccttctcccgattcctcaatgctgaggagatcctc
caggacaccctcctcagcttggtctctgaactaccccctgtacccctggtggcagagact
ctggtgcaggccttccctgaggaggaggagtcagtcagggtccctctgagagagaagtac
aactcactcctgcggagactgaggcactgcactgtcccagcctcaggacagaacggtgag
aagagggatgaggaggagggagaggaggtgatgatgattctggtgcaggagcggctcaga
cagaggaggaaggacctgaagcgtctggccaggcacctggctcccctggagctctaccta
tgggagagggaggaggagcaggacagggggggaggagggcagggggctctagccctgctg
gagagattctccctgggggccagtctgagtaacagcaccctgacggactgtgggcgcccc
ctggtgtacagtgatggagacacggccgagaactccgtggccctctctcctgacctgcac
agcaggcctcctcacagcatcagcaagagagtgagggtgcaggaccgagcagacaagcct
ggaagtcaagtagaagtagttgagggtgggagcacccaggaggaagagcagagctgcacg
ggcccagcccaggaccctgctgtgggggaggacagcccctctctgaccctgcccgtggtg
gggacctgggagtttgagctggaggatgcagagtacctgcgtttcctggagctcttcctc
agctacgtgttggagaaggacggtcctgacccagacgcaggctgtgaccctcccctgctg
aagggcttctgtagccagctgagagagagggagctgcactccctcaccttcgatgtcctc
accaccctccgccgccgccagagagatgggcgccaagcgaccaggaggcaggggggcagt
gacgcccccgtgttcagagcaggacactgctacaaaccagtactcgttaccaaccctttg
tttctccacagtgagccccctacacccagacccagcatgtctgtcagtgtcctgtccctt
cctgggctcaggactggcaggcagcaggggttgtttggcttcagtctgcaggccaggtca
gccagcccagctccagaacccgcacctcaaagaagccgccttggctcgaagtctagcccc
agtcagagttctgttccctgggagcaaccatcggagggctgggcgttcgggcccctgtgc
tccgtggaggctgtagaactgcagcaggagatggagcccaagctggaggcccagttccca
gggctgggcaggctgctggagtggatggtgcgctgggctgataagagggtgttgctggga
caacccagccggatgaaggagagggaggcgggcggaggagaggtagctggaggtggggtg
gttattcgggtcaaagcctcggctcctgcggtgctcacggccctcaacatgttggagcac
aggtacaccgccgccctgttaggcatggaccactacagcgcaaacttacaggttccagag
aggcagtggacagtggctccagtgttgcagcctgaggtgggctggaagctggagagggag
agcagtgtggatacaggttaccctgcatcagctggcacacccattactctgccagaccag
gatccccaacactgcgaactgtcctatggctcacagactgagggggtggaacgagtgaca
tcccaagagacctcacagctttctgaccctgtgggagtgaacttaaaccctgagagtggg
gtgtcagacttcccagacaacaagtgtgacctttctgctgaaaaaggagaggacagcaat
gctgacgaggccttgaggtcatcagcctctctcgccatcctcaacatctctgtccacatc
aagagcctccgtccaacactgagcccaccaggccaggcattaacgctggcagatctacgg
tgctcagagagggaagagaacattgtcagctctcaagaggaggaggcagagaatctgctg
tctcatggctccctgagaagaccatcagatattactgaagaagtgacaagaaatataact
ctgagtgagggttcaggatcagacggccctcccaatgccagcttccaaccccttcccggg
gcagggcctcaggctggggctcaggtagcagactctgcccctaacggcggactgccccag
gggagcaccaatacgacccctgcccctgcctctgctcccaaccagacccttccggcccag
acagaccctgtcagacagctcttgcaggatgagctattcagactggtccagttgcagcag
atcaacttcatgagtttgatgcaggtggtcggagcgtcgtttgtcaacctcccagtgtca
cagaacaacacactcccggcccagtccaatgtgccctatccacaccccaatactcctctg
tcccaccctaacactctcctccctcacctgaatctgaccccctcccagaacaacatgtcc
cctatgcctcagacccagagctcggttcaggcccctctagcctcggagcccctgtctggg
ggacacggacccacagaccaaccccccatccacgaaatgcagccattggccgtccaccct
gagccattgagagatatccaggggcagaccaggacattgatctcatcctctcatgggatt
cagaccactgtggaccccacctgcagtgcccctctgctactgccctttggtggtagttca
caggtttctgctccctacagctcaggactgaagctgcttcagctgcaccctcccctgctg
tccctccagcggcatggtaaaacggcccctgtacgtgaggcctggggacccccgtctgag
aggagacccagcactgccgtgcccccccacctgaaccccagccagtatgacccagccgct
ctggggagggcagaggagagatcgagggaggcagagagagagtccaccgcgccaccatca
cacctcaatctgacacagtatgcccactatccctccaaccaggcccccaggaacacactg
cccctgctccagaatccagagaccagggtggagaggtccagaggggctgagccccgtcac
ctgcctcctaccctcccatcccacagacctccccctgtccacggactccccctcctccgc
ttccaccctgacccacgcccccctacgaccttcgctctcatacccctcccacactcctcc
aggcccctgactgtcaccccagcagccatgggccacaaccccagactacagctactccag
agggacccagaccctcctaggatgatgctgcccgaagccacccctccggcctgcgtgcca
catctcatccctctgggggagctgatgggctgggctgcagggagacagaggggggcagag
gccagactccaactcctcagagtggacccacaggcacagaaccctacccctgcaacaccc
tccaccagcaccaactccagcaggaggcagaagagacgagtggagaggttgaggagagag
ggagagaaagcagagatcacatttagaccggaggactccatcatactcccgctagagtgc
aatgaggacgagcctgcagagcctgttcttggggagggctatgtcttccctcttgggaca
tttgactccgtgctgactggtcagggattggtggacaaggcactgtctactgcagctgag
ctccatgcctttgcctctacacacaagaggcctcctgagagccacgatgcctgcaccaac
acagacccagcttctcctcactcagatacaggaatttctgcccaacctactgtcacgtct
gctgcttctggacctgctgctctccctcctgaattgttcctgaatctgcggttccctaga
gaccctcctgtccacgacacagagacatcgggggagaaacgacccgagagaaacacgggt
cgtcagttcatacatgtgatagatctggaggatggggccctgctacaggagttgccatcg
tgcccccgccctgcggtgcgggaccatgacgtcaccccgtctcagccctctccccccacc
tcagcacagctccacctgctggcagcctccgtcatcaactcagccccttcggaacttact
gcagacaccagcacagaggacgaccaaccccaagctcagccaagtggtctgagtcaatgc
ttctctgtagcgtccctcccacctgcccaccctgagcccagtggagacccagtgactcgc
agtctgctgcaggagaggagagccccaagccgctccctagagacccatcgtggagctcca
tccagggccccagtgatccaggtggctgcccgtctgtctgagatggacgcccagctagct
gccttgcagaacattgcagatcacatggagagagagtttgccaataccagactgctggtg
agcaccattgagactctgcgtcctgccatggctcctgaaagggtggagggaagaacacca
gtgaacaagacagtgactctggccgtctcaccagaagggtggcgatcacgtctgtccgtg
caccatgaccctgagctagcgggactttgccaggaagaggaggagcaggaggaaggacct
gatagtgtcgtagtcagctctgctccttggggtgtgaaacagccctcctctctttctcct
cacgctcatgccgtccagagcacctcgaccctgcaccagcccacacccacaggcctgtgg
ttgtctcccgtcagaccagaaccagagcaacgtgtgtgggacatgggtcaagatttaaca
gacactatggatggagcacctggaacatgggcagaggagactctgggtctcagtgggctg
agtgatgtggcagacatcttgacggagttggtgagggggggaggcatctcccccacggcc
ctggggctgtcgcacacccaagctgcccgcctcaacagcagtgatgtgtttgtgattgac
agcaggctggaccagcaacagagcggcagggcgggacagaggggcatgcgagcagaggag
gagaggcgagagctgagggtttggatgagaaggaaacagagggagaaactggtcgagtac
cgcagacagagggaggagaagagggagagggaacgcaaacccttctcaaccccagtcaca
ctgaaaccaacgtccaaagatataaacatcaataagaaaatcaaggaagagaaagacaag
acggttctgctggagcaccacaatcagcgggcccgcgatgcctgtagtctgatcacagac
ctcctcaccaccccactgaccctgcccactaacgccaaccgcaccctgaacctaccctcc
acctcctcacgaccctcttccacacgaccccttacagctcagactgtcggcagcacccgc
agcagccccagaggtcgtagtctctctgttggggggaggaggaggaccagtaccaaaccc
cagactgggagagcccgctccctctcctctccaggggtgacaccacgttcagaaagacgg
cctgcgtcatcaggggggcaggagacactgacttccagattgggactgcacagaccagcg
agttttctgccaggggatcgtctctcccacgtgacccggcggggtatgatcacagacctg
aggggcaggactgggactgggccgatgacacccagccagcaagagtggagaagagaagtg
atccagtcgtcatctggacggagaggtggaggagcaagggagcagagagagactgaagag
agggaggaggaggtggtgagcccatggaacccccctccagagatctgcaggttgctgggg
ctggagaactcagagggccagggtggtgtggtggctagagctgggggagcagggctggac
agacttgataccctgtcagagagcactggcagcatcctcagcaaactggactgggctgcc
attgaaagcattgtggcctcggaaggggccatctga
DBGET
integrated database retrieval system
