Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139409178
Help
Entry
139409178 CDS
T10872
Name
(RefSeq) transcription factor E2-alpha-like isoform X1
KO
K09063
transcription factor E2-alpha
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Ubiquitous (class A) factors
139409178
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139409178
NCBI-ProteinID:
XP_071010064
LinkDB
All DBs
Position
5:complement(62422183..62447157)
Genome browser
AA seq
680 aa
AA seq
DB search
MNEQQQQRMTAVGTQDKELNDLLDFSAMFAPPVANGKNRPTTLASSQFGGSALDERNGSG
SWGPGEQNSPPFNQGRGYGDGSHYNEHEGLSSPFLSSGIGGKNERIPYSSFGGQPGFLPS
DIVMPSPDAMSPSGLKSTSQFYPGSYPNNPRRRPPDGQLDTQPKKIRKPPGLPSSVYASS
SGDEYARDNGGYPGTKPGSVYPGSFYMQGNYLQEGLHPSSDPWASSGPLGQSGYSAMLGN
SPHIGQPGSFSAINPQDRMKRQPLPLSPQNYPLHGSEVNGSLPPSFHSGSGSYNHTPSIN
GADGIMANRGATAGSSGDEIGKALASIYPSDHNSNNFSSTPSTPVGSPQGIAGAASQWPR
PSGQSALSPNYEGQLHALQNKMEDRLEEAIHVLRSHAVQGPPGLGGGAHSDMHSLLSAVS
SAHNGGLGGLSQAFSNAGLALSNRHPAMGGNHHEEPTGLPPSSTLLHGHHASGPPQSTGQ
SDGFTSLPGSVARSTHSSSGSDIKREDKEDEENSSIADKSEDEKKETKRIRARKEALTLQ
ILSGLSGLSDPGDDPEDEDDEDLPPEVKVEREKERRVANNARERLRVRDINEAFKELGRM
CQLHLSNDKPQTKLLILHQAVNVILNLEQQVRERNLNPKAACLKRREEEKVSGVVGDSPM
QLSGGHPGMGGDGHNPVSHM
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atgaacgagcagcagcagcagagaatgactgcagtgggaacacaagacaaggaactcaac
gacctcctggatttcagtgcgatgtttgcaccacctgtggctaatgggaagaacagaccg
acgacactcgctagcagtcagtttggcggatcagctctggatgagcgcaatggctctgga
tcctggggcccaggagaacaaaacagcccccctttcaaccagggaaggggctacggagat
ggctcccactacaatgagcacgagggcctgtcatcccccttcctcagctcaggaatcgga
ggtaaaaatgagaggataccatactcttcctttggtggccagcccggcttcctacccagt
gacatcgtcatgcccagtccagatgccatgtccccctctgggctaaagtctacctctcag
ttctaccccggatcgtaccccaacaaccccaggaggaggcctcccgatggccagctagac
acccaacccaagaagatccgcaagccccctggcctgccgtcctcggtgtatgcctcttcc
tctggggatgaatatgcacgtgacaacggaggatatcctggcaccaaacctggctctgtc
tacccaggctctttctacatgcaaggtaactacttgcaagagggcctccacccctcctct
gacccctgggcctcctcaggacctctgggtcagtctggctactctgccatgctggggaac
tccccccacattggccagccaggctccttctctgccatcaacccacaggacaggatgaag
cgtcaacccctacctctgtccccacagaactaccctctccatggcagtgaggtgaacggc
agcctcccacccagcttccactctggctctgggagctacaaccacacgccctccattaac
ggagcagacggcatcatggccaacagaggcgccactgcagggagctcaggggatgagatt
gggaaggctcttgcatcgatctacccctcggaccacaacagtaacaacttctcctccaca
ccctccaccccagtgggctcgccccagggaattgcaggagctgcatctcaatggccaaga
ccttcagggcagtctgccctgtcacccaactacgaagggcaactgcacgccctgcagaac
aaaatggaggaccgtctggaagaggccatccacgtgctgcgtagccacgctgtccagggc
ccgcccggcttggggggaggagcccactctgacatgcacagcctgctgagcgctgtgtcg
tctgcgcacaacggtggcctgggaggcctctctcaggccttctccaacgctggcctggcc
ctcagcaacagacaccctgccatgggaggaaaccatcatgaggagcccacaggccttcct
cccagcagtaccctgctgcacggtcaccacgcctccggaccccctcagtccactggacaa
tccgacggcttcaccagtctgccaggaagcgtggcccgctccacacactcgtccagtggc
tcggacatcaagagagaggacaaggaggacgaagagaactcctccatcgctgacaagtct
gaagacgagaagaaggaaaccaaacgcatcagagcaagaaaggaggcgctgaccctccag
atcctctctggcctctcaggcctgtcagacccgggagatgatccagaggatgaggatgac
gaggaccttcctccagaggtaaaggtagagcgtgagaaagagcggcgagtggccaacaac
gcccgcgagcggctgcgagtgcgagacatcaacgaggctttcaaggagctgggccgcatg
tgccagctgcacctcagcaacgacaaacctcagaccaagctgctcatcctgcatcaagcc
gtcaacgtcattctcaacctggagcagcaagtccgagaacgtaacctgaaccctaaagca
gcgtgtctgaagcggcgggaggaggagaaggtgtctggggtggtgggtgactcccccatg
cagctctcgggaggccaccccggcatggggggagacggccataacccagtcagtcatatg
taa
DBGET
integrated database retrieval system
