Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139409203
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Entry
139409203 CDS
T10872
Name
(RefSeq) stromal cell-derived factor 1-like
KO
K10031
C-X-C motif chemokine 12
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04060
Cytokine-cytokine receptor interaction
ocla04672
Intestinal immune network for IgA production
ocla04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
139409203
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
139409203
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
139409203
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
ocla04052
]
139409203
00536 Glycosaminoglycan binding proteins [BR:
ocla00536
]
139409203
Cytokines and neuropeptides [BR:
ocla04052
]
Cytokines
Chemokines
139409203
Glycosaminoglycan binding proteins [BR:
ocla00536
]
Heparan sulfate / Heparin
Chemokines
139409203
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IL8
Motif
Other DBs
NCBI-GeneID:
139409203
NCBI-ProteinID:
XP_071010130
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All DBs
Position
1:58003117..58035454
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AA seq
98 aa
AA seq
DB search
MDLKLLAFMSVLAVATYVPFAQAKPISMMERCWCHSTVNTVPQRNIRELKFLHTPNCPFQ
VIAKLKNHKEVCINPETKWLQQYLKNALNKMKKAKQIN
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atggatttgaaactcttggcgtttatgtctgtgcttgctgtggcgacatacgttcctttc
gcacaagctaagcccatcagtatgatggagaggtgctggtgtcattctacagttaacacc
gtcccccagcgcaacatccgagaactgaagttcctacacacacccaactgccccttccaa
gtgattgccaagctgaagaaccacaaggaggtgtgtatcaaccccgagaccaagtggctg
cagcagtacctgaagaatgccctcaacaagatgaagaaagccaagcagatcaactag
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