Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139409363
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Entry
139409363 CDS
T10872
Name
(RefSeq) protein FAM83H-like isoform X1
KO
K23931
protein FAM83H
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ocla04812
]
139409363
Cytoskeleton proteins [BR:
ocla04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
139409363
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SACK1
PLDc_2
Motif
Other DBs
NCBI-GeneID:
139409363
NCBI-ProteinID:
XP_071010507
LinkDB
All DBs
Position
1:59825595..59883854
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AA seq
1659 aa
AA seq
DB search
MAHRSQCSSAGDNRLDPNYVPPHYREEYRLAIDALVEDDLEGYYEFLQSADVVDFLSRQE
IEHIKCTVKVPYQNTQPELPYVESGGDGSSDTYWPVHSDLDAPGLDLGWPEQHRFIGPTD
VTTLVNPSEPDMPSIKVQARRLIKNAQQVIAVVMDTFTDVDIFADILDAAMRNVAVYIIL
DEQNAHHFTSMASNCRVNLENIQFMRVRTVSGVTYHCRSGKTFKGQMMDRFLLTDCRAVL
SGNYSFMWSFEKLHRCMAHLFLGQLVTTFDEEFRILFAQSQPLVLENVLVSMPHYSSLSD
SQYSSDRTLLFRDPRKFLPIDSSRPVEWARHSSDDRMDMVQNMMPPGRCEPIHSSLDQGP
LDMYSNKYSSQQFKLEQQSFMGQGHSMIQSNTMEFAGSKRHSYAEGTYAGHSSSQFMQHQ
AIHSSEWDTATQNRKIHREQHHYQRTGLEPSYSGYDQFRDQAYPLMDQYSESGYPHGIAI
EPPDNYDPVLNYLSSSNLAVELGHGSNKLSSPGEGPFSQSNPKRLRTGQPHACQTSPTQQ
NPFEQRSFFVRSGSDCKTQDPSAKQGMRDWRISSYLSAFDDAGEEEIPQPMGNDPFQEPL
NPTQGKLFAPLVSDPRFSAKELPKIPGLRLNKPTCPEHSRTLEILVSLDAQTTLTPPSSS
TTEGDKSEEMDVKEPKREESFRRRFNPAIQRTSRLRSSLIFSSQLEQHISQEQKCNSGQH
CEETANEEDDPSRLSLTAQVLGKRRSITREPFEWRLKSAIVDNSTIESLKSEDITTDSGD
KELTKYLPVSTDKVSSMEQPNSAHEEQTKTVESAHPSKPAQVEKPKTIQSAHQASSLSNK
SYIDMNDPDSRLFFFKELAAKRKAAKAAESESSAEKAPVKPVTPFDLKIKEPVTRIEPNL
PIATLNPADTSTNKPAPADTSTNKPAPSTEAPPNPSDTFTTKPTTSTEAPLYPADTSIKK
TSTSTDASSETLETSPVLQENKTSMAKYGSLFDVKEHHSKNKEQQDLQLPKSDSKTFLRD
KLSCVDGLLRVSTDTEKIELKNSRNQSVSKVNPRDTSTFLKSTSNQCSFNISPKDFSLYK
LSPKKPKSFNPASNELNPSLPLTLTEASSSSYPTPKGLSSTSLTSSPNAAKELSSALTPT
LKEPSSSIPMSKQPLSSSKPITVESNILLSPTQSEPGVSHKQDKTDSKESLSPIPMQSCS
SSIPATELSPPPNPTQTQSSFLPKSTLVGSISSTPMESNTSPKPSTKESLSTIATTELRS
SSPKTNPIKSYSSPCPGQHESVLSLKHSKTACNSSPKPATVSNDSYNSSPPSSKHVMEET
NKSPILTPTKSSSPPEPTPTESSASTNPTPRELNPLPSTTPTEPSASTGLTLTESSASSN
PTPTKAHSSLTCGSGGSVVCPKPGQTKSRTSPNLTQKESCSSPNHTLTEPTSPFNPVLVE
SVPSSNSNPTESTASYDTAPAPPVIVDNSKEGKPSKLNKEQKVGSSAAYKREKIAGDPET
KSKTAPGESASHGSQSPDETKENNSTMKPESTTDQSNPIPPPVKQPKVSQSHYHLSTANV
LSSSNLRDDTKLLLEQISANSQSRTELTKESAVTDDAKQDEADRGVSGKEEASARRQIGG
PARTSQEREKLLQRIDSMRKGRKVYSRFEVKYPAASIGQ
NT seq
4980 nt
NT seq
+upstream
nt +downstream
nt
atggcacaccgctctcagtgttcctcagccggggataaccgcctggaccccaactatgtg
cctccccactaccgcgaggagtaccgtctggccattgacgcacttgtggaggatgacctg
gagggctattatgaattcctccagagtgcggatgtggtggacttcctttccagacaggaa
attgagcacattaagtgcacagtgaaagttccctaccagaacactcagcctgagctccca
tatgtggagtctgggggagacggctcttcagacacatactggcccgtccactctgacttg
gatgcacccggacttgaccttggctggcccgaacagcatcgcttcataggccccactgat
gtcaccacactggttaacccctctgagccagatatgccaagtatcaaggtgcaggctcgt
cgacttatcaagaatgctcaacaagtgatcgctgtggtaatggacacttttacagatgtg
gacatctttgctgatattctggatgctgccatgcgaaatgttgccgtgtatatcattctg
gatgaacagaatgcacaccacttcactagcatggcttccaactgccgggtcaatctggaa
aacattcaattcatgcgtgtcagaacagtgtcaggggtcacctatcactgtcgctctggg
aagaccttcaagggtcagatgatggatcgcttcttgctgacagactgcagggcagtcctg
agtggaaactatagcttcatgtggtcttttgagaagcttcaccgttgcatggctcacctc
ttccttggacagcttgtgactacttttgatgaggagttccggatcctgtttgcacagtcc
caacctttggtactggaaaatgtccttgtttcaatgccacactacagcagtttatctgac
agccaatacagcagtgatcggacactattgttcagagatcccagaaagttcctccccata
gacagctctcgtcctgtagaatgggctagacattcctctgatgaccgcatggatatggtt
cagaatatgatgcctcctggaaggtgtgagcccatccacagttcactagatcagggtcca
ctagatatgtacagcaacaagtactcctcccaacaatttaaactggagcagcagtctttt
atgggacaaggtcactccatgatccagtcaaacacaatggagtttgctggctctaaaagg
cacagttatgcagagggcacttatgccggacattcctcctctcaattcatgcagcaccaa
gccattcacagcagtgagtgggatacggcaacccagaacaggaagatacatagggaacag
catcactatcagagaacagggctagaaccaagttatagcggctacgatcaattcagggac
caagcgtaccctctgatggatcagtattctgagtctgggtacccacatggaatagcgata
gagccaccagacaactatgaccctgtactgaattatttgtcatcatcaaaccttgctgtg
gagctgggacatggctcaaacaaattatcaagtccaggagagggtccctttagtcagtca
aaccccaaaagactgagaacgggccagcctcatgcctgtcagacctccccaacacaacaa
aacccatttgaacagagatcattttttgtcaggtctggttcggactgtaaaacacaggat
cccagtgcaaagcaggggatgcgagattggaggataagctcatacctcagtgcatttgat
gatgcaggagaggaagagattccacagcctatgggaaatgacccctttcaagagcccctt
aatccaacacaaggcaaattatttgctccactggtatcagatcccaggtttagtgccaaa
gagttacccaagattccagggctcaggttaaacaagcccacctgcccagaacactcaaga
acactagaaattcttgttagcttagatgcccaaacaacactaacaccaccttcgtcatca
accactgaaggtgacaaatcagaggagatggatgtaaaagagcccaaaagagaagagtca
ttccgtaggaggttcaatcctgctatccaaaggacctcgagactaagatcctcactaatc
ttcagctcacaactcgaacagcatatctcacaggaacagaaatgtaactctggccaacac
tgtgaggaaactgccaatgaggaagatgacccatctagattatccttgaccgctcaggtt
ttgggaaaaagaagatccattacaagagaaccttttgaatggagacttaagtcagcgata
gttgataattcaaccattgagtctttgaaatctgaggacatcactactgattcgggtgat
aaggaattgacaaagtatcttcctgtgagcactgacaaggtttcttcaatggaacaacct
aattctgcccatgaagaacaaaccaaaacggtagaatctgcacacccatccaaacctgct
caagttgagaaacccaaaaccatacaatcagcacaccaggcatcttcattgagcaataaa
tcctatatagatatgaatgatccagacagtaggttatttttttttaaagagttggctgcc
aaacgaaaagctgcaaaggctgcagagtctgagagcagtgctgaaaaagctcctgtaaaa
ccagtgactccatttgacttgaaaattaaggaaccagtcacaaggatagaacctaacctt
ccaatagccacactaaatccagcagatacttcaaccaataagccagctccagcagatact
tcaaccaataagccagctccatcaacagaggcacctcctaatccatcagataccttcacc
acaaagccaacaacatcgacagaagccccactttatccagcagatacttcaataaaaaag
acatctacatcaacagatgcatcatcagaaacactggagacttcaccagtgttacaggag
aacaaaacatccatggcaaaatatggctccttatttgatgtcaaagaacaccattctaaa
aataaagaacagcaagaccttcaacttcccaaaagtgactccaaaacattcctcagggat
aaattatcttgtgtcgatggcctacttagagtctctactgatactgagaagatagagctg
aagaacagtcggaaccaaagtgtgtctaaagttaaccctagagatacaagtacatttctt
aagagcacctcaaatcagtgttcctttaacatctccccaaaggatttcagtttatataaa
ctatctccaaagaaaccaaagtcattcaatcctgcttcaaatgagctaaacccatctctt
ccactcacactaacagaagctagctcatcttcatatccaacaccaaaaggtttaagctca
actagtctcacttcatcaccaaatgcagcaaaggagttgagctcagcccttacccccacc
cttaaggagcccagttcatctatccccatgtcaaagcagccattatcatcctctaaacct
atcacagtagagtccaacatacttctgagccccacccaatctgagccaggtgtgtctcat
aagcaggacaaaacagattccaaggaatctctcagccctatcccaatgcaatcttgctca
tcctcaatccctgcaacagaacttagccctccgccaaaccctacccaaacacaatctagt
ttcttacccaagtccaccttagttgggtcaatttcatcaacaccaatggaatctaacacc
tctcccaaaccctccacaaaggagtcattgtctacaattgccacaactgagttgaggtca
tcctctcctaagaccaacccaataaaatcctattcctccccttgtcctggccaacatgag
tcggttttgtcactcaaacattccaaaacagcatgcaactcctctccaaagcccgctaca
gtgtccaatgactcttacaactcttcacctccatcttcaaagcatgtcatggaagaaacc
aacaaatctcccatcctcacaccaacaaaatctagctctcctcctgagcctaccccaaca
gaatctagtgcttcaaccaatccaacaccaagagaactcaaccctcttcctagcaccacc
ccaacggaaccaagtgcatctactggcctgactctaacagaatcaagtgcatcttctaac
ccaaccccaacaaaagcacactcctcccttacatgtgggtcaggtggatcagttgtgtgt
cccaagcctggccaaacaaagtccagaacttctccaaacctcacccaaaaagaatcttgt
tcatctcctaatcataccctaactgaacctacctcaccattcaaccctgtccttgtggaa
tccgtcccatcaagcaactcaaacccaactgaatccactgcctcttatgacactgcccca
gctccacctgtcattgtggataacagtaaggagggcaaaccaagtaaacttaacaaggag
caaaaagtgggaagttctgcagcttataaacgtgagaagatagcaggtgatcctgaaaca
aagagcaaaactgctcctggggaatctgcctcccatggatcgcagagtcctgatgagacc
aaagagaataacagcactatgaaaccagagagcacaacagatcaaagcaatcccatacca
cccccagtgaagcaacctaaagtaagccagtcccactaccatttatctactgccaatgta
ctctctagcagcaacctaagagatgacacaaagctcctattagagcagatttctgctaac
agccagagcaggacagaactcactaaagaatctgctgtcactgatgatgccaaacaggat
gaggctgaccggggtgttagtggtaaggaggaagcatcagcccgacgacagatcggaggg
ccggctagaacttctcaggagagggagaagcttcttcagagaatcgatagcatgcggaag
gggaggaaagtctacagccgctttgaggtaaagtaccctgctgcatcaataggccagtag
DBGET
integrated database retrieval system
