Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139409406
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Entry
139409406 CDS
T10872
Name
(RefSeq) protein tyrosine phosphatase receptor type Fa isoform X1
KO
K05695
receptor-type tyrosine-protein phosphatase F [EC:
3.1.3.48
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04514
Cell adhesion molecules
ocla04520
Adherens junction
ocla04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
139409406
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
139409406
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
139409406
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ocla01009
]
139409406
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ocla04515
]
139409406
Enzymes [BR:
ocla01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
139409406
Protein phosphatases and associated proteins [BR:
ocla01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
139409406
Cell adhesion molecules [BR:
ocla04515
]
Immunoglobulin superfamily
Type II RPTP family
139409406
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
fn3
I-set
Ig_3
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Ig_2
fn3_2
ig
Interfer-bind
Tc-R-P
PTP-SAK
V-set
DSPc
Y_phosphatase3
C2-set_2
Fn3_PTPRU
PTPlike_phytase
PTP-NADK
SusE
Fn3_ELFN
Insulin_TMD
DUF3465
Motif
Other DBs
NCBI-GeneID:
139409406
NCBI-ProteinID:
XP_071010622
LinkDB
All DBs
Position
5:77273414..77697972
Genome browser
AA seq
1918 aa
AA seq
DB search
MALSHRWAQSPLARGATFILLLGSLALPSPSHADSMPNFIKSPDDQTGISGGVASFVCQA
VGDPKPRITWMKKGKKVSSQRFEVIEFDDGSGSVLRIQPLRTHRDEAIYECTATNSVGEI
NTSAKLTVLEEDQIPHGFPTIDMGPQLKVVEKTRTATMLCAASGNPDPEISWFKDFLPVD
INSSNGRIKQLRSGALQIENSEESDQGKYECVAVNSAGTRYSAPANLYVRVRRVPPRFSI
PPTNHEVMPGGSVNLTCVAVGAPMPYVKWMMGVEELTKEEEMPIGRNVLEVTNILQSANY
SCVAISSLGMIETTAQITVKALPKPPTSLIVTETTATSVTLTWDSGNPEPVSYYVIQYRA
KVSDNSFQEVDGVATTRYSIGGLSPYSEYEFRVMALNNIGRGPPSSLVDTRTSEQAPSSP
PLAVQARMLSASTMLVQWEPPEEPNGQIRGYRVYYSSDLRAPLSGWQKHNTDDSRLTTIS
GLTTDITYSLRVLGFTSVGDGPPSDVLQVKTQQGVPAQPSSFNAEAELDTRIMLSWLWPV
QDQITKYELMYWEANSGNKLHVTFLPAGSYAVEGLKPDTLYMFSLAARSEMGLGVFTQPI
EARTAQSTPSAPPQEVHLLSLSSTSIKVSWVAPPAASRHGDIVRYSLAYQAATGEDLERH
KVSGIRADVSSYILEGLEKWTEYQVWVRAHTDVGPGPESPAVRIRTKEDVPGAPPRKVEA
DVLNSTALRVTWKPPLQVKQHGQIRGYQVVYSRLENGEPRGQPSIMDVSLPEAQWNVEDT
MDYEAVITGLLPETTYSVTVAAYTTKGDGARSKAKVVTTTGSVPGRPTMMISTTIGNTAL
IQWQPPKEMVGEHVGYQLQYKRMEEESFTVKDFKKTDDHFTVTGLHKGATYVFKLCAKNR
AGTGEEYVKEITTPDDVPSSYPQNLSVVGLTTTTTKLAWEPPALAERNGRIVQYVVVYRD
INSQQNHTNSTIETQMTIMGLQPDTTYDIRVRAFTSKGAGPNSPSIQSRTMSTSMPEFTK
NFGVKTVMKTSVLLTWEVPETYKSQVPFKILYNQQSVEVQGNLKRKLITRLQPDTDYSFV
LMSRGNSAGGLQQQVSIRTAPDLLKTKPIQYQHHPEEGGKLTITLPRVPTTAPVRWYYIV
VVPVTPATLRRWENPEDMDLDELLEASSDQSLRRRRQTQEFLRPYIAAKMDNLPDTFTLG
DEKKYNGFYNKPLPGQQQYLCFVLAALKDHESQKTFAASPYSDPITVKLHSGMPLHAEDP
EMLWVMGPVLAVVLIIIIVIAILLFKRKRASPSAKDEHSAGVKDSLLAHSSDPVEMRRLN
YQTQGSSDPSCPNTPRMREHPLISTTDLANHIERLKANDGLRFSQEYESVDPGQQFTWEH
SNLEVNKPKNRYANVIAYDHSRVILASVDGVPGSDYINANYIDSYRKQNACIATQGPLPE
TLSDFWRMVWEQRTNTIVMMTRLEEKSRVKCDQYWPSRGTETYGMIQVTMLDTVELATYS
VRTFALYKNGSSEKREVRQFQFMAWPDHGVPEYPTPTLAFLRRVKSCNPTDAGPMVVHCS
AGVGRTGCFIVIEAMLERMKHEKSVDIYGHVTCMRAQRNYMVQTEDQYVFIHEALLEAAT
CGNTEVPARNLYAHIQKLTQVTPGDTVTAMELEFKKLANSKAHTSRFISANLPCNKFKNR
LVNIMPFESTRVSLQPIRGVEGSDYINASFIDGYRQQKAYMATQGPLAETTEDFWRMLWE
HNSTIVVMLTKLREMGREKCHQYWPAERSARYQYFVVDPMAEYNMPQYILREFKVTDARD
GQSRTIRQFQFTDWPEQGVPKTGEGFIDFIGQVHKTKEQFGQDGPISAHCSAGVGRTGVF
ITLSIVLERMRYEGVVDLFQTVKTLRTQRPAMVQTEDQYQLCYRAALEYLGSFDHYAT
NT seq
5757 nt
NT seq
+upstream
nt +downstream
nt
atggcactgagccaccgatgggcacaatctcccctcgcgaggggggccacatttatccta
ctactgggcagtctggccctgccatcaccatcccacgcagacagcatgcccaatttcatc
aaatctccagatgaccagacaggtatttcgggaggagtggcatccttcgtttgccaggcg
gtgggcgatcccaagccacgcatcacctggatgaagaagggcaagaaagtcagttctcag
cgctttgaggtgatagagtttgatgacggttcagggtccgtcctgcgtatccagcccctg
cggacccacagggacgaggccatctatgagtgtactgccaccaacagtgtgggagagatc
aacaccagcgccaaactcaccgtcctggaagaggaccagatccctcatgggttccccacc
atagacatgggtccccagctgaaggtggtggagaagaccaggacagccaccatgctgtgt
gctgccagtggcaaccctgacccagagatctcctggttcaaagacttcctccctgtagat
atcaacagcagcaacggtcgaatcaaacagctccgctcaggagctctccagatagagaac
agtgaagagtccgaccagggcaagtacgagtgtgtggcggtcaacagcgccgggacccgc
tactcggctccggctaatctctacgtgagagtgcgccgcgtgccaccccggttctccatc
ccgcccaccaaccatgaggtgatgccgggtggcagcgtgaacctgacgtgtgtggcagtg
ggagcgcccatgccctatgtcaagtggatgatgggagtagaagagctgaccaaggaggaa
gagatgcccattgggaggaacgtgttggaggtcaccaacatcctccagtctgccaactac
agctgtgtggcgatatcgtcactcggcatgatcgagaccaccgcgcagatcactgtcaaa
gccttgcccaagccccccacctccctgatcgtgacggagaccacagccaccagcgtcacc
ctgacctgggactctgggaaccctgagcccgtgtcctactacgtcatccagtaccgggcc
aaggtctctgacaacagcttccaggaggtggatggggtagccaccacgcgctacagcatt
ggtggcctcagcccctactccgagtacgagttccgcgtcatggcgctgaacaacatcggg
cgtggccctcctagcagcctcgtggacaccaggaccagtgagcaggctccatcctctcca
ccactagctgtacaggctcgcatgctcagtgcctccaccatgctggtccaatgggagccg
cctgaggagcctaatggacagatcagagggtaccgggtgtactacagctcggacctcaga
gccccactgagtggctggcagaaacacaacactgacgacagcagactaaccaccatctca
gggctgaccactgatatcacctacagcctcagggtgctggggttcacctctgtaggggac
ggacctccctctgatgtactgcaggtcaagacccagcagggagtaccagcccagccatct
agtttcaacgccgaggcagagttggacacccgcatcatgctgtcgtggctgtggcctgtc
caggaccagatcaccaagtatgaactgatgtattgggaggctaactctggcaacaagctc
catgtgaccttccttccagcggggtcctatgctgtggagggtctgaagccagacaccctc
tacatgttctccctggctgctcgttctgaaatgggcctgggcgtctttacccaacccatc
gaggccaggactgcccagtccaccccctcagccccgccccaggaggtgcaccttctgagc
ctcagctccaccagcatcaaggtgagttgggtggcaccccctgcagccagccgccatggg
gacatcgtccgctactctctggcctaccaggccgccaccggtgaggacctggagcgccac
aaggtgtcgggcatcagggcagatgtttctagttatatcctggagggcctggagaagtgg
acagagtaccaggtgtgggtcagggctcacacggacgtaggcccaggcccagagagcccc
gcggtcaggatcaggaccaaggaggatgtgcctggagctccacccaggaaggtggaggct
gatgtcctgaactccacagccctgagggtgacgtggaagccccccctccaggtgaagcag
catggccagatcagagggtaccaggtggtctactcgcgactggagaacggagagccacga
ggccagcccagcatcatggatgtctccctacctgaggcacagtggaacgttgaggatacc
atggactatgaggctgttataacaggcctgctccctgagaccacctactctgtcaccgtg
gcagcctacaccaccaagggggacggggcacgaagtaaggccaaggtggtcaccaccact
ggatcagtcccaggcaggcccactatgatgatcagtaccaccattggtaacacagccctc
atccagtggcaaccaccgaaggagatggtgggagagcatgttggctaccagcttcagtac
aaacgtatggaggaggagtcgtttactgtaaaggacttcaagaagacagacgaccacttc
actgtcaccggcctgcacaagggcgccacgtacgtcttcaagctctgcgccaagaaccgg
gcgggcaccggcgaggagtacgtgaaggagattacgacgccggacgatgtgcccagcagt
tacccccagaacctgagtgtcgtaggcctgaccacgactactaccaagctggcctgggag
cctccggcgctggctgagaggaacgggaggatcgtccagtacgtggtggtgtacagagat
atcaacagccaacagaaccacaccaatagcacaatagagactcagatgaccatcatgggg
ctgcagcctgataccacctatgacatcagggtcagggctttcaccagcaagggagccgga
cccaacagtcctagtattcagagtaggaccatgtctacctccatgcctgagttcaccaaa
aactttggtgtgaaaactgtgatgaagacctctgtcctgctgacttgggaagtgccagaa
acctacaagtctcaagtgcctttcaagatcctgtataaccagcagagtgtggaggtgcag
gggaacctgaagaggaagctgatcacgaggctgcagccagacacagactacagctttgtg
ttgatgtctagagggaacagtgctgggggtctacagcagcaggtctccatcaggaccgcc
ccggacctgctcaagaccaaacccatccaataccaacaccacccagaggaggggggcaag
ctcaccatcaccctacccagagtccccaccactgcccctgtcagatggtactacatagtg
gtggttcctgtcacaccagccacactacgtaggtgggagaaccctgaagatatggacctg
gatgagctcctggaggctagttctgaccagagcctgagaaggaggagacagacccaagag
ttcctcagaccctacatcgctgccaagatggacaatctgccagacaccttcactctagga
gacgagaagaagtacaacggcttctacaacaagcctctaccgggacagcagcagtacctc
tgtttcgtcctggctgccctcaaagaccacgagtctcagaagacgtttgcggccagcccg
tactcagaccccatcacggtgaagctccacagcggtatgcccctccatgctgaggaccca
gagatgctgtgggtcatgggccctgtcctggctgttgtactcatcatcatcatcgtcatc
gccatcctgctcttcaagaggaaacgagcatctccctcggccaaggatgagcactctgct
ggggtgaaggactctctgctggcccactcctctgatcctgtggaaatgagacgactcaac
tatcagacacaaggttccagtgaccccagttgcccgaacactccaaggatgagggagcac
cctctcatctccaccactgatcttgctaaccacatcgagcgtctcaaggccaacgacgga
ctccgcttctcacaggagtatgagtctgtagaccctggccagcagttcacatgggaacac
tctaacctggaggtgaacaagccaaagaaccgctatgcaaacgttatcgcctatgaccac
tccagggtcatcctcgcctctgtcgacggagtgccaggtagtgactacatcaacgctaac
tacatagacagctacaggaagcagaacgcctgcatcgctacacagggcccgcttcctgaa
accctgagtgacttctggaggatggtgtgggagcagaggaccaacactatcgtcatgatg
accagactggaggagaagtcacgggtgaagtgtgaccagtactggcccagtcggggtaca
gagacttatgggatgatccaggtgaccatgttggacactgtggagctggctacctacagc
gtacgcaccttcgccctctataagaatggctccagtgagaagagagaggttcgtcagttc
cagttcatggcctggccggaccatggagtgcctgagtaccccacccccaccctggccttc
ctccgcagggtcaagtcctgcaaccccacagatgcaggacccatggtggtccactgcagt
gctggtgtaggtcggaccggttgcttcatcgtgattgaggccatgctggagcgtatgaag
catgagaagtcagtggatatctacggtcatgtgacgtgtatgagagctcagcggaactac
atggtgcagacggaggaccagtacgtcttcatccacgaggccctgctagaggcagccacc
tgcggtaacacagaggtccctgcacgcaacctgtacgcacacatccagaagctcacccag
gtcacgcccggagacacggtcactgccatggagctagagtttaagaaactggccaactcc
aaagcacatacctcaagattcatcagtgccaacctgccctgtaacaagttcaagaaccgg
ctggtgaacatcatgccttttgagtccacccgcgtgagtctgcagcctatcagaggagtg
gagggctccgactacatcaatgccagcttcatcgacggatacaggcagcagaaggcctac
atggccacacaggggccgctagcagagaccacagaggacttctggaggatgctgtgggaa
cacaactctaccatcgtagtcatgcttactaaactcagagagatgggaagagaaaagtgt
catcagtactggccagctgagcgttctgccaggtaccagtactttgtagtagaccccatg
gctgagtacaacatgccccagtacatcctcagagagttcaaggtcacagacgccagggat
ggccagtctaggaccattcggcagttccagttcactgactggccagaacaaggggtgcca
aaaactggagagggcttcattgacttcattggtcaagtgcataaaaccaaggagcagttt
ggccaggatggaccaatctctgcgcactgcagtgctggtgttgggcggactggtgtgttc
atcaccctgagtatcgtgctggagaggatgaggtacgagggggtggtggatctcttccag
actgtcaagacactgaggacccagagacctgccatggtgcagacagaggaccagtaccag
ttgtgctacagggcagctctagagtaccttggaagctttgaccactatgcaacataa
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integrated database retrieval system
