Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139409451
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Entry
139409451 CDS
T10872
Name
(RefSeq) proto-oncogene tyrosine-protein kinase receptor Ret
KO
K05126
proto-oncogene tyrosine-protein kinase Ret [EC:
2.7.10.1
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04010
MAPK signaling pathway
ocla04020
Calcium signaling pathway
Brite
Enzymes [BR:
ocla01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
139409451
Protein kinases [BR:
ocla01001
]
Receptor tyrosine kinases (RTK)
RET family
139409451
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139409451
NCBI-ProteinID:
XP_071010720
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Position
1:complement(60142633..60172590)
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AA seq
1112 aa
AA seq
DB search
MGQTCGFSLGNIVLVLLLLCEGSVGLYFPQNQYKETVYVGQSAGTPVLQVHAMVESDSQR
PHFYLCYLRPPTYAPWFHLDETTGILSMNKTLEWSDFDSAYKFWKLPLSVIAATRPLKKF
LCGLGHPTVQVSLTFINDTAPPCGQTRPELKKLCFPDKDLSSHIKENRFPGALRQLRQLT
RLNVCPNYTISYSVESDVPAPFAVNENTTELVVTAPLDREESETYSPMLICTVQTDTMVD
TFFVTLHINVYDEDDNAPYVSETDTEDVVLEFDRKQGSSFGNLVVYDRDTTPRYPKSQSQ
NRFVGNMMTNDSWINEMFTIEYSFKEEKAIFGNVRGTVHEFRLALKKNLSVTENRTFQLD
YLVNDTTYPGPEGTVMLHYNITVLPVPILFTNVTYLFALTRRANVYSQVGRICVDNSLKF
QGINVTYRLVVAEKTGNVSDDVQSCYAAISIAQSLKDMVGVLYVNDTEALRRPECQDLQY
VVIAQEQQNLLQASTQILVVLDSNIDKQGLEDQQFLSCAKGRQRGDCETIRGLGATTGRC
QWRQGSAKGISESYSTCSPDLRTCPDGFCDAVESKDASICPQDCTLEPVIGGHEKGIMSG
IRAGHGTCYCYSEKCFCEKDDIEEAMCDEVCKTIIATAVLLSFIVSILLSSYFIHRYHKN
SPKPPITSAEMTFRRPAQSYPISYSANNMRRGSLDSMENQVAIDTFKIPEDPKWEFPRKN
LVLGKTLGEGEFGKVVKATAFRLKGKAGYTTVAVKMLKDHASHSELRDLLSEFTLLKQVN
HPHVIKMYGACSQDGPMYLIVEYAKYGSLRNFLRESRKVGPSYMSGNDANRNSSYLENPD
ERALTMGDLISFTWQISRGMQYLAEMKLVHRDLAARNVLVAEGRKMKISDFGLSRDVYEE
DSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPERLFN
LLKTGYRMEKPENCTEEMYNLMLRCWKQESNKRPIFIDISKELEKMMVKNRDYLDLAAST
PADALLYDDALSEEDTPLVDSNNAPLPRTIPSTWIENKLYGMSYPNWPEKSPVLLNRLDA
TNPVFTRYANDSVYANWMALPSPAKIVEKIDS
NT seq
3339 nt
NT seq
+upstream
nt +downstream
nt
atggggcaaacgtgtggtttctctctgggaaacatcgttttggtcctcctgctgttgtgt
gaagggtcagttgggctctacttcccccagaatcagtacaaggagactgtgtacgtcggg
cagtctgcagggacacccgtgctccaggtccacgccatggtggagagcgactctcaacgg
ccccacttctacctgtgctacctgaggcctccaacctatgccccatggttccacctggac
gagaccacagggatactctccatgaataagaccctggagtggagcgactttgactctgca
tataagttttggaagctgccgctgagtgtcattgctgcgaccagaccgttgaagaagttc
ctctgtggcctcggccaccccaccgtacaagtcagcctgaccttcatcaatgacacggcg
ccaccgtgtggccagaccagaccagagctgaagaaactgtgcttccctgacaaagacctg
agctcccacatcaaggagaacaggttccccggcgccctccgccagctcagacagctcacc
aggcttaacgtctgccccaactacaccatctcctacagtgtagaatccgatgttccggcc
ccattcgctgtgaatgaaaacaccactgagttggtagtgactgctccgttggaccgcgag
gagagcgagacatacagtcccatgctgatctgcacagtgcagactgacacaatggtagac
accttttttgttacactgcatatcaacgtctacgacgaggacgacaatgcgccgtatgtc
agtgaaacggacacagaggacgtggtgctggaatttgatcgcaagcagggaagttctttt
ggcaacttggttgtctatgatagagacacaacacccaggtatcccaaatcccagagtcag
aatagatttgtcggaaatatgatgaccaatgactcatggataaatgaaatgttcaccata
gaatactctttcaaagaagagaaggccatttttggcaacgtccgaggcactgttcatgag
ttccggcttgcactgaagaagaatttgtctgtaactgaaaataggaccttccagctggat
tacctggtcaatgacactacataccccggtccagagggaactgtgatgctgcactacaat
atcaccgtcttacctgtccccattctcttcaccaatgtgacatacctcttcgcactaaca
cgtagagctaatgtctactcccaggtcggtaggatttgtgtggacaacagcctgaagttc
cagggcatcaatgtcacataccggctagtagtagcagagaagacagggaatgtgtccgac
gacgtacagtcatgctacgctgcgattagcatcgcacagagcctcaaggacatggtgggg
gtgctatatgtgaacgacacagaggcgcttcgcaggccagagtgccaggacctgcagtat
gtggttattgctcaagagcaacagaatctgctgcaggctagcactcagatcctcgttgtg
ctcgatagcaatattgataagcagggcctagaggaccagcagttcctctcctgtgcaaag
ggaagacagcgtggggattgtgagaccatcagaggcctgggggcaaccacagggaggtgc
caatggagacagggctctgcaaaaggaatatcagaaagttattccacctgctcccctgac
ctccgcacgtgccctgatggcttttgtgatgcagttgaaagcaaagacgcatcaatatgt
cctcaggattgtacacttgaacccgttataggtggtcatgagaagggcatcatgtctggc
attagagctggccatggaacctgctactgctactctgaaaaatgcttctgtgagaaggat
gatatagaggaggccatgtgtgacgaggtctgcaagaccatcattgccactgccgtgctg
ctctccttcatcgtctccattctcctgtcctcctacttcatccatcgttaccacaagaac
tcccccaagccgcccataacctcggctgagatgaccttccggcggcccgcacaatcctac
ccaatcagctactctgctaacaacatgcgccgtggctcgttggactccatggagaaccaa
gtagccattgacaccttcaaaatacctgaggatcccaaatgggaatttccacgcaaaaac
ctggtgctgggcaaaacgttaggagaaggggagtttgggaaggttgtcaaggcgactgca
ttccggctgaaaggaaaggctggttacaccacagtagctgtgaaaatgcttaaagaccac
gcctcacatagtgaactgcgggacctcctgtcagaattcaccttactgaagcaagtcaac
catccacacgtcatcaagatgtacggagcctgcagccaggatggtccaatgtatctgatt
gtagaatatgccaaatatgggtcactgcgcaacttcctccgtgagagccgaaaggtggga
cccagctacatgtcaggcaacgatgccaaccgcaactcgagctacctggagaatccagat
gagagggcactcaccatgggcgacctgatctctttcacctggcagatctccaggggcatg
cagtacctggctgaaatgaagcttgttcacagggacctcgctgcaagaaatgtcctagtt
gcggagggccgtaagatgaagatttcagactttggtttgtcccgggacgtgtatgaggaa
gactcatatgtgaagaggagcaagggtcgaatcccagtgaaatggatggcaatagaatcc
ttgtttgatcacatttacacaacacaaagtgatgtctggtcctttggtgtgctgttgtgg
gagattgtgacactgggtggaaacccgtacccaggcatcgcccctgaacgcctctttaac
ctcctcaagactggctacaggatggagaaaccagaaaactgtactgaggaaatgtataat
ctgatgcttcgatgctggaaacaggagtcaaacaaaaggcccatattcatagacatcagc
aaagaactggagaagatgatggtgaaaaaccgggattacctggacctggcagcgtctacg
ccagccgacgccctactgtacgacgacgccctctccgaagaggacacacccctagtggac
agcaataatgcccctctccctcgaaccattccctccacatggattgaaaacaagctctat
ggcatgtcatacccgaactggcctgagaagagccccgtactgctcaacagacttgatgcc
actaacccagtctttacaagatatgccaatgatagcgtttatgcaaactggatggctttg
ccttcacccgcaaaaattgtggagaagattgatagttaa
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