Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139409514
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Entry
139409514 CDS
T10872
Name
(RefSeq) receptor-type tyrosine-protein phosphatase C isoform X1
KO
K06478
receptor-type tyrosine-protein phosphatase C [EC:
3.1.3.48
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04514
Cell adhesion molecules
ocla05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
139409514
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
139409514
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ocla01009
]
139409514
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
ocla04090
]
139409514
Enzymes [BR:
ocla01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
139409514
Protein phosphatases and associated proteins [BR:
ocla01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
139409514
CD molecules [BR:
ocla04090
]
Proteins
139409514
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
DSPc
Tc-R-P
PTP-SAK
fn3
Y_phosphatase3
PTPlike_phytase
CX9C
Motif
Other DBs
NCBI-GeneID:
139409514
NCBI-ProteinID:
XP_071010875
LinkDB
All DBs
Position
5:89012684..89039516
Genome browser
AA seq
1480 aa
AA seq
DB search
MAGLYGLKILLLCTGLIELAICDGDKTSEGSTTTIPPPGTVAITNKPTSIPITPLNSQTA
SISTTPPPINEQDKSNISSTSPTQSTKNANDSTGPLLPNTTTITTTTTTTLSPSLSSLTP
TSNIITQASSQATLSNATGDSSTSTSYPASTLNQTQTSDPASTLNQTQTFDPASTLNQTQ
TSDPASTLNQTQTSDPASTLNQTQTSDPASTLNQTQTSDPASPLNQTQTSDPASTLNQTQ
TSDPASTLNQIQAFPTNTSQNQTLPTNNSTSPSLPTSTPPIHNQTSPASTLTSTTAIPTG
SQTKPTPPKCTYTVTPVIYGFQIDLKASTSDTYNISYQDESGKHITVEHQTVNSTIVGSL
KPCRKYTLTKIQPECELQGNSTLRTEKMDDLEFSTNTKPGYLCYVTKWDISDAEWNSPVI
TWDKDNCFQLLDEHFCTNFTTNVAVPGDCSVNISKTIPITAEYSAVKHSPNLEFKNVLPV
EIVWKNKPKNCSPKDLDIHYTCEGNNRSINLDDLEPFQKYSCSGKITHNSKVINTKSIDV
EIKCKVDITKTSTNTNTSISLKWTNDSINCPKNLKLFHSCVSCRIETEVKACYTTDELHY
DFNKLQPFTNYICSIDLRYKNMSYDTFPNVSKKIQTAPGVPDEVGGKKLSVTYTQNNAFT
ITCEELKPVQWKGKEKWYIATITGSETKQQKHKKCNFTFADLSYLTDYTVQIVAFNGKYK
SKPIETHITTHYNDKAVIGFLVFLIILTSLALLFVLYKIYILQRKKSNNNDEQIELIQPS
DEENLLNVEPIGSEVLLDAYKRKIADEGRLFLQEFQSIPRIFSRNTVREAKKSCNQPKNR
YVDILPYDYNRVQLTSGNGETGCDYINASFIDGFKESKKYIAAQGPKEETVGDFWRMVWE
QQSSIIVMVTRCEESNRNKCAQYWPSPEREVEIFEGFVVKLNREEHCPDYIIRHLSLTNK
REKSAEREVTHIQFTSWPDHGVPGEPHLLLKLRRRVNAFKNLFSGPIVIHCSAGVGRTGT
YMGIDAMMEGLEAEGRVDIYGYVVKLRRQRCLMVQVEAQYILIHQALIEHNQFGETEISL
AELHPTLGTLKQRDPGNEPTLLEAEFQRLPRYKNWRTFNTGINEENKKKNRSSSVIPYDY
NRVLVKLEDESSHDQDDDNDDDDSSDEEDEESTKYINATQIDGYWCQRSLIAAQGPLADT
TGDFWQMVFQKKVNTIVMLSDLTEGDQEFCSAYWGEEKKTFRDIEVELKATETLPAYTTR
SLQIRHPKRKDSRQVKQYQFLKWAGRELPEKPQDLMDMIKNIKQTCGYGNSKAERILPVV
VHCNDGSSRSGVFCALWNIMDSAETEKLVDVFQVAKALRKERQGMIHSLEQYQFLYDAVE
GSFPIQNGEVKQPATAPAAAADSIQVVNETKAEQPASATTATQQGAEVVKEAVESTPLVA
GKEAGAAAEGNEDEAAEPGSPTEKTPLGGSSNGPAVTLEV
NT seq
4443 nt
NT seq
+upstream
nt +downstream
nt
atggcaggtctctatggactgaagatcctgctgctgtgtactgggctcatagagctggcc
atatgtgacggggataaaacttcggaaggctccacaacaacaatacccccaccaggaaca
gtagccatcaccaacaaacccacaagcattcccatcacacctttaaactctcagacagca
tccatctcaaccactcctccacccataaatgagcaagacaaaagcaacatctccagtact
tcacccacacaatccaccaagaatgcaaacgactccacaggccccttacttccaaacacc
accaccatcaccacgacgaccactaccaccctctcaccttcactcagttcgcttaccccc
acctcaaacatcatcactcaggcatcaagccaagctaccctctccaacgcaactggcgac
tcgagcacaagcacttcttaccctgcaagcaccctcaaccaaacccagacatctgaccct
gcaagcaccctcaaccaaacccagacatttgacccagcaagcaccctcaaccaaacccag
acatctgaccctgcaagcaccctcaaccaaacccagacatctgaccctgcaagcaccctc
aaccaaacccagacatctgaccctgcaagcaccctcaaccaaacccagacatctgaccct
gcaagccccctcaaccaaacccagacatctgaccctgcaagcaccctcaaccaaacccag
acatctgaccctgcaagcaccctcaaccaaatccaagcctttcctacaaacacctctcaa
aaccagactttgcctacaaacaactcgacctctccatctttgcctacaagcactccaccc
atccacaaccaaacctcacctgcaagcaccctgacttccactacagctatccccacaggc
agccagactaaaccaacaccgccaaagtgtacatacacggtcacacctgtcatctatggc
tttcagattgacttaaaggcctcaacctccgacacatacaacatatcgtaccaggatgaa
tcaggaaaacacattactgttgagcatcaaacggtgaactccactattgtgggatcattg
aagccttgcaggaaatacactttgacaaagattcagcctgaatgtgaactccaaggaaat
agcactctgaggactgagaaaatggatgacctagagttttccaccaacacgaagccggga
tatttgtgttatgtgacgaaatgggatatcagtgatgctgaatggaacagtcctgttatc
acctgggacaaagacaactgttttcagcttttagatgaacatttctgcacaaacttcaca
accaatgtagctgtgcctggagattgcagtgtcaacatcagcaaaactataccaataaca
gcagagtattctgcagtcaaacattctcccaatctggaattcaaaaatgtactccctgtt
gaaatagtatggaaaaacaagccaaaaaactgtagccctaaagatctggacattcattac
acctgtgaaggaaacaacaggtctatcaacttggatgatttggaaccctttcagaaatac
agctgtagtggaaagattactcacaacagtaaagtcatcaataccaagtccattgacgtt
gaaatcaagtgtaaagtggacattaccaaaacgtctacaaacacaaacacctccataagc
cttaaatggaccaatgacagcattaactgccccaaaaatcttaagctatttcactcctgc
gtttcctgtagaattgagactgaagttaaagcttgttacacaacggatgaattacattat
gattttaataaattgcagccgttcacaaattatatctgttcaattgatctgcggtacaaa
aacatgagctacgatacattcccaaatgtgtctaagaaaatccaaactgcacctggagta
cctgatgaggtggggggaaaaaaactgagtgtgacttatactcagaacaatgcttttacc
attacatgtgaggaattaaagccagttcagtggaagggaaaagagaagtggtacattgca
acgatcactgggtctgagacaaaacaacaaaaacataaaaaatgcaattttacatttgcg
gacctcagctatttaacagactacacagttcagatcgttgcattcaatgggaaatacaag
agtaaaccaatagaaacacacattactactcactacaatgacaaagctgtgattgggttc
cttgtgttcctcatcatcctgacgtctctggctctcctcttcgttctctacaagatctac
atcctgcagcgcaagaagtccaacaacaatgatgaacagattgagctgattcagccaagt
gatgaggagaacctgctgaacgtggagccaatcggatctgaggtgcttctggacgcctac
aagaggaaaatcgccgatgagggacgtcttttccttcaggagtttcagagcatccccagg
atcttcagccgcaacacggtcagagaggccaagaagtcctgcaaccagcccaagaaccgc
tacgtagacatcctcccatacgactacaaccgtgtccagctgaccagtggtaatggagag
actggctgtgactacatcaacgccagcttcatcgatggtttcaaggagtctaagaagtac
atcgcagctcaaggtcccaaggaagagacagtgggggatttctggaggatggtttgggag
caacagtcctctatcatcgtcatggtaacacgttgtgaggagagtaacaggaacaagtgt
gcccagtactggccgtctcctgaaagggaggtggagatctttgaggggtttgttgtgaag
ctgaacagagaagagcactgtcccgattacatcatccgtcacctcagcttgaccaacaag
agggagaagagtgcagagagggaggtgacccacatccagttcaccagctggccagaccac
ggcgtgccgggagagccacacctcctgctgaagctgaggcgacgcgtcaacgccttcaag
aacctcttcagtggacccatagtcatccactgcagcgctggagtggggagaacaggcacc
tacatgggaattgatgccatgatggaggggctggaggctgagggcagagtggacatctac
ggatacgtggtcaagctacggcgccagagatgcctcatggttcaagtggaggctcagtac
atcctgatccatcaggctctgatagaacacaaccagtttggagagacagagatctccctg
gcagagctgcacccaacactgggcacactcaaacagagagaccctggtaacgagcctact
ctgctggaggcagagttccagagacttccacggtacaagaactggcggacattcaacacg
gggatcaacgaggagaacaagaagaaaaaccgctcctcttctgttattccatacgactac
aacagggttctggtgaagctcgaggacgagagcagccatgaccaggacgacgataacgat
gacgatgactcttctgacgaagaggacgaggagtccaccaaatacatcaacgccacacag
atagatggttactggtgtcagaggagtctgatagcagcccagggtcctctagccgacacc
acaggagacttctggcagatggtcttccagaagaaggtcaataccatcgtcatgctgtca
gacctcacagaaggagaccaggagttctgttcagcgtactggggagaggaaaagaaaacc
ttcagggacatcgaggtggagttgaaggccacagaaaccctcccagcgtacaccactcgc
agtctccaaatccgtcaccctaagaggaaagacagtcggcaggtgaaacagtaccagttc
ctgaagtgggcgggacgagaactcccagagaagcctcaggatttgatggacatgatcaag
aacatcaagcagacctgtggctatggcaacagcaaggcagagaggatcctgcctgttgtg
gtccactgcaatgatggctcgtctcgctccggggtcttctgtgcgttgtggaacatcatg
gacagtgccgagacagagaaactggttgacgtgttccaggtggccaaggctctgcgcaag
gagaggcaaggcatgatccacagcctggagcagtaccagtttctgtatgacgccgtggag
ggatcgtttcctattcagaacggggaagtgaagcagccagccaccgccccagctgcagca
gctgactccatccaggtcgtcaacgagaccaaagcagagcagcctgccagcgctaccaca
gccacccagcagggggcagaggtggtgaaggaggccgtagagagcactcccctagtggca
gggaaagaagcaggtgctgcagcagagggcaatgaggatgaggctgcagagccaggtagc
cctacagagaaaacccctctgggggggtctagtaacggccccgctgtcaccctggaggtg
tga
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integrated database retrieval system
