Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139409575
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Entry
139409575 CDS
T10872
Name
(RefSeq) selenocysteine lyase
KO
K01763
selenocysteine lyase [EC:
4.4.1.16
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla00450
Selenocompound metabolism
ocla01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
139409575
Enzymes [BR:
ocla01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.16 selenocysteine lyase
139409575
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Motif
Pfam:
Aminotran_5
Beta_elim_lyase
Motif
Other DBs
NCBI-GeneID:
139409575
NCBI-ProteinID:
XP_071011037
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Position
5:93206299..93225108
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AA seq
497 aa
AA seq
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MSEPVKASSGTRDPRDHSHRSVDGRPFSHHSATSDGHTVTSLDDHHALSHHSDTGGANGH
THSDLPFDGHIHTYIPDMDEDRIYMDYNATTPLEPQVIQAVTEALHEAWGNPSSTYTPGV
KAKKIITQARENVARMVGGKADDIIFTSGGTEANNLVFHSALEAYRESCRTAEQRGERHR
HENSGTSAWPLPHILVSNVEHDSVRLTAEHLLKDATADVTSVAVSKVTGRVEVEDVLAAV
RPSTCLISIMMANNETGVLMPIRELCQRVRFVNRQRQHRILLHTDAAQAIGKVRVDARDL
GVDYLTIVGHKFYAPRMGALYVNGPGTTTPLYPMLFGGGQERNFRPGTENTPMIAGLGKA
AELVNSNLTEYETHMLDARDYLEEQLQAIFGRERIHFNSHFPDSETLPNTCNVSILGAGL
QGRKVLSCCRRLLASVGAACHSHRGDRPSHILLSCGIPEEVAANALRLSVGRGTSRAEVG
LVVEDLKNAVERLEGLN
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaccagtgaaggccagctccggcacaagggacccgagggaccacagtcaccgc
tcagtagacggtcgtccattctctcaccattcagctacatccgatggccatacagtcact
tcattggatgaccaccacgcactctcacatcattcagacacaggtggtgccaatgggcac
acgcactcagaccttccatttgacggtcatatacacacgtatattccagacatggacgag
gacaggatctacatggactataacgccaccaccccactggagccacaggtgattcaggct
gttactgaagccctgcacgaggcctggggaaaccccagtagtacctacacaccaggagtg
aaagcaaagaagatcattacccaggcgagagagaatgtggctagaatggtgggggggaaa
gcagatgacatcatcttcacctctggtgggactgaggccaataacctggtgttccacagt
gccctggaggcctacagagagagctgcaggacagcagagcagagaggggagagacatcgc
catgagaacagcggaacctcagcctggcctctacctcatatcctcgtctctaacgtagag
catgactctgtcagactgaccgctgaacacctgctgaaggacgccacggcagacgtgacg
tcagtggcggtttccaaggtgacggggagggtggaggtggaggatgtgttggctgctgtc
cgcccctccacctgtctcatctctatcatgatggctaacaacgagacaggagtcctaatg
ccaatcagagagctctgtcagagggtcagatttgtcaacagacagcgtcaacatagaatc
ctcctgcacactgacgcagcccaggccataggcaaggtgcgggtcgacgcccgtgacctg
ggagtggattacctcaccattgtaggacacaagttctatgcaccgaggatgggagcgttg
tatgtgaacggcccaggaacaaccacacccctctaccccatgttgtttggagggggacag
gagaggaacttcagaccaggcactgagaacacaccaatgatcgctggccttggaaaggca
gcagagctggtgaactctaacctgactgagtatgaaactcatatgctggatgcaagggac
tacctggaggaacaactacaggcgatctttgggagagagaggatccatttcaacagtcat
ttccctgactccgagaccctacccaatacctgtaacgtgtctattctgggtgctggacta
caggggaggaaggtattgtcctgctgtagaagactgctggccagtgttggggctgcatgc
cattcacacagaggagacaggccctcccatatcctgctgagctgtggcatccctgaagag
gtggcagctaatgccctgaggctgagtgtggggagagggaccagtcgggctgaggtaggc
ctggtggtggaggatctgaagaatgctgtcgagaggctggagggactcaactga
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