Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139410738
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Entry
139410738 CDS
T10872
Name
(RefSeq) RING finger and CHY zinc finger domain-containing protein 1-like isoform X1
KO
K10144
RING finger and CHY zinc finger domain-containing protein 1 [EC:
2.3.2.27
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04115
p53 signaling pathway
ocla04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
139410738
09140 Cellular Processes
09143 Cell growth and death
04115 p53 signaling pathway
139410738
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ocla04121
]
139410738
Enzymes [BR:
ocla01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
139410738
Ubiquitin system [BR:
ocla04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
139410738
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zinc_ribbon_6
zf-CHY
zf-RING_2
zf-RING_UBOX
zf-RING_5
zf-C3HC4
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
139410738
NCBI-ProteinID:
XP_071012285
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All DBs
Position
6:20540496..20545427
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AA seq
273 aa
AA seq
DB search
MNGKMAAPVGCDHYIRSCFLKAPCCGKAYVCRLCHDAEEDHQMDRFLVKEVQCSVCNTVQ
QAQKTCQECNVTFGDYYCDICHLFDKDKKQYHCQPCGICRIGPREKYFHCQKCNLCLASD
LRGNHKCVENVSRQNCPVCMEDMHTSRIGAHVLPCGHLLHKTCFDDMVRTGAYRCPLCMH
SAWNMEDSWEQMDKDMAQSPMPTEYQDATVKIICNDCQTHCTVPFHVLGMKCSGCGSYNT
AQDGGLIQQLQEPQPQEPQQEPEHKPQSPVPEP
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgaatggaaaaatggctgctcctgttggatgtgatcactacatacgcagctgttttttg
aaagctccatgttgtggtaaagcgtatgtttgtcgcctgtgtcatgatgctgaagaggac
catcaaatggaccgcttcctggtcaaagaggtgcagtgctcagtctgcaacacagtacag
caggcacaaaaaacctgccaggagtgtaatgttacatttggggactattactgtgatatc
tgtcacctgtttgataaagacaagaagcagtatcactgtcagccctgtggaatatgcagg
attggaccaagggagaaatacttccactgtcagaagtgcaatctctgtttagccagtgat
ctacgaggaaatcacaagtgtgttgaaaatgtttcaagacagaactgcccagtgtgtatg
gaggatatgcacacatcaagaataggagctcacgttcttccgtgtggccatcttctacac
aaaacttgctttgatgacatggtccgaactggtgcatatcgctgcccactctgtatgcac
tcggcctggaatatggaggactcctgggagcagatggacaaagatatggctcagtcaccc
atgcccactgaataccaggatgccactgtgaagatcatatgtaatgactgccaaacccac
tgtacagtgccttttcatgttctgggaatgaagtgcagtggctgtgggtcctacaacaca
gcacaggatgggggactgatacagcagctccaggaaccacagccccaggagccacagcaa
gagccagagcataagccccagtccccagtgccagaaccatag
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