Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139411627
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Entry
139411627 CDS
T10872
Name
(RefSeq) proline-serine-threonine phosphatase-interacting protein 1-like isoform X1
KO
K12804
proline-serine-threonine phosphatase interacting protein 1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
139411627
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139411627
Membrane trafficking [BR:
ocla04131
]
Endocytosis
Bin/Amphiphysin/Rvs (BAR) family proteins
F-BAR proteins
139411627
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH3_9
FCH
SH3_1
SH3_2
SH3_3
GMIP-like_FCH
DUF4120
SH3_KALRN
SH3_10
DUF4363
Motif
Other DBs
NCBI-GeneID:
139411627
NCBI-ProteinID:
XP_071014321
LinkDB
All DBs
Position
6:76948719..76967537
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AA seq
431 aa
AA seq
DB search
MTPLLYKDAFWGVDFTNHQGYEVLIQRLCDGRRMCKDVEELLKMRAMAEERYGKDLVTIA
RKAGGQTEISTLKASFDQLKTQIENIGNLHIQLSGMLREEIRKMEIFRERQKEQRRKFEG
IMEKVQKMKVSLYKKTMESKKSYEQKCKEADEAEQLADRSTTATTTKQSEKVQHKAKQCR
QAVTEAEKQYMLNVEQLERVRQDWEGTHKGTCEVFQQQEVDRITILRCVLWDHCNHFSVQ
CVKDDEFYEEVRNILETCDITADNNCFIEMKTTGSSPPDPIVFENYYEREPSPTGDNNGS
ARFGGGGVRKRFSNLLPRNSSSKMSISEGSASEPAAPTVGQTVPESSDGVYASIPGFQSA
AAAALPAVTTNEDDDDDTFMVFYDYSAQDPDELSVSKGDVVLVIEQSEDGWWTVERNGQV
GLVPGSYLAKV
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgactcccttgctgtataaagatgccttttggggagttgatttcactaatcatcagggc
tatgaggttctgattcagagactatgtgatggcaggcggatgtgcaaagatgtggaggaa
ctgctgaagatgagggccatggcagaagagaggtatgggaaggatctggtgacaatagca
cgtaaagctggggggcagacagagatcagcactctgaaagcctcctttgatcaacttaaa
acacaaattgaaaacatcgggaatctgcatatccagctatccggaatgttacgggaagag
atcaggaagatggaaatattcagagagcggcagaaagaacagaggaggaagtttgagggg
attatggagaaagttcagaagatgaaggtgtccttatacaagaagaccatggagtctaag
aagtcctatgagcagaaatgtaaagaagcagacgaggcagagcagcttgctgacaggagc
accacagccacaacaacaaaacagtctgagaaggtacaacacaaggccaagcaatgcaga
caagccgtcactgaagcagagaaacaatacatgttgaacgtagagcagctggagagagtt
cgtcaggactgggagggaacacacaagggcacgtgtgaggtgtttcagcagcaggaggtg
gaccgcatcactatcctgaggtgtgtcctctgggaccactgtaatcacttctctgtgcaa
tgtgtcaaagacgacgagttttacgaggaggtgaggaatattctggagacgtgtgacatc
acagcagataacaactgtttcatagagatgaagacaacaggttcaagtccaccagacccc
attgtgtttgagaactactatgagagggagccatcaccaactggcgacaacaacggcagc
gctcgcttcggagggggaggggtcaggaaaagattctccaatcttctgccacgaaactct
agttcaaagatgagtatcagtgagggttcagcttccgagccagcggcgccaactgttggt
caaacagtgcctgagagttcagatggagtgtatgcatccatacctggcttccagtctgca
gctgcagctgccctgcctgcagtgacaactaatgaggatgatgatgatgataccttcatg
gtgttttatgactactctgcacaggacccagatgagctgtcagtgtctaaaggggatgtg
gtgttggtgatagaacagagtgaagacggctggtggacagtggagagaaacggacaggtt
gggctggtacctggctcctacctggccaaagtctag
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