Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139412516
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Entry
139412516 CDS
T10872
Name
(RefSeq) early growth response protein 2b-like
KO
K12496
early growth response protein 2
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
139412516
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocla03000
]
139412516
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Zinc finger
Cys2His2 SP/KLF family and related proteins
139412516
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Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
DUF3446
zf-C2HC_2
C2CH-3rd_BIRD-IDD
zf-BED
zf-C2H2_STOP2_C
zf-C2H2_15
zf-C2H2_ZNF462_1st
zf-C2H2_6
zf-C2H2_11
Motif
Other DBs
NCBI-GeneID:
139412516
NCBI-ProteinID:
XP_071015380
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Position
1:complement(75781910..75784327)
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AA seq
387 aa
AA seq
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MTAKTIDKVWVPTSSFIQDIQEVIYSMEEEISASLPETGTGLKVESYWKQHDQLGETKGG
DCFSEERGTLEFIYHGNFTQPPRTQAVAYTGKVSINSRGVEYWNPGGAINVASADIRVAA
SSPVSTSPSPEPPNLYAGTVSCTMAQSQHDINHMYATPSYSCTGEMYQDQSTYLATSTCP
MSYPQPSYSSYTSPKSTVDSALLNIMPDYSGFFQPNCQRDIQAFPDRKALPYSLDSLRVP
PPLTPLNTIRNFTLGGPAIEGPCPPNPYNTSNLPLRPILRPRKYPNLPSKTPVHERPYPC
PAESCDRRFSRSDELSRHVRIHTGHKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDH
CGRKFARSDERRRHTKIHLRQKEKKSS
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgacagctaaaactattgacaaagtttgggtacccaccagtagttttatacaagacatt
caagaggtaatctattcaatggaagaggaaatatccgcatcattgccagagacgggaact
gggttaaaagttgagtcatattggaaacagcacgaccaattgggtgaaaccaaggggggt
gattgttttagtgaagaaaggggcaccctcgagtttatttaccacggcaactttacgcag
ccaccgcgcactcaggctgtggcatacaccgggaaggtctcgatcaattctagaggtgta
gaatactggaatcccgggggtgccattaacgtagctagtgctgacataagggtggcagct
tcgtccccggtgtctacctcgccctcgcctgaaccaccaaacctttacgcaggaactgtg
agctgcaccatggcgcagagtcaacacgatataaaccacatgtatgctacgccgtcttac
tcttgtaccggggaaatgtaccaggatcaatcaacctacctggcaacgtcgacctgcccc
atgtcttatccacaaccgtcgtactcatcctatacatcaccaaagtcaacagtggacagc
gccctcttaaacatcatgcctgactacagcgggttcttccagccaaactgccaacgagac
atccaggcatttcctgacaggaaagcgttaccatattcactggactctctgagggttcca
ccacctctgacacctctgaacacaataaggaattttacgcttgggggacctgcgatagag
ggcccttgtccaccaaatccctacaacacttcgaacttacccctgaggccaatattgaga
ccgagaaagtatccaaacctcccaagcaaaacgcctgtccatgagcgaccatacccttgc
ccagcagagagctgcgataggaggttctcgcggtcggacgagctgagcagacacgttagg
atccacacagggcacaaacccttccagtgtcggatctgcatgcgcagtttcagtcgcagc
gaccacctcactacgcacatccggacacacactggagaaaaacccttctcctgtgaccac
tgtggaagaaagtttgccaggagtgatgaaagaaggagacacacgaaaattcacttaaga
cagaaagagaaaaagtcatcataa
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