Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139413430
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Entry
139413430 CDS
T10872
Name
(RefSeq) polyhomeotic-like protein 2 isoform X1
KO
K11457
polyhomeotic-like protein 2
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
139413430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ocla03036
]
139413430
Chromosome and associated proteins [BR:
ocla03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
139413430
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PHC2_SAM_assoc
SAM_1
zf-FCS_1
SAM_2
eIF-5_eIF-2B
SAM_PNT
DUF7608
Motif
Other DBs
NCBI-GeneID:
139413430
NCBI-ProteinID:
XP_071016900
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Position
7:complement(50457697..50516263)
Genome browser
AA seq
863 aa
AA seq
DB search
MDSEHVPPASSASSTGTTASSTSTTSSSSAGRQAVPHISVYSGIPDRQTVQVNFRVIQQA
LHRQPNTAAQYLQQMYAAQQQHLMLQTAALQQQHLSNAQLQNLAAVQQASIAAGRQSSTQ
NATSSQQTGSSQTTVSAINLTTSPAAAQLISRAQSVSSAPAGSISQQAVILGSPSSPTSL
TASQAHMYLRAQMAQQSNLVQVARSLGRAVPLSPQLIFTPTATVAAVQSESSMRSSGQQP
SSQVQNLAIRSQQGATTSSSQTHSLQALSLKQSPISIQPSPLIKNPSQGSQGAGGKGSRP
DGALDGSKKGESIVTEVHAINMSRSVTAVSGQPLSTPAYTQIQPHSLVQQHKQQQFVIQQ
TQASQRTQGQLLQTASIQPHLQTTPLVPHSPSQPGPIPVLPKPTSHHQPTTPSQQATIFH
STISPHALHSNLSQAKAQPVQLTAINLQIQPVPSQASRLVQDSKGQDKPTSLVVRERCPT
TRVQQQCTPSAQSPPQATKPTEQPKTDPVTPISQPQGVTTTNRVNAAPGTPPPAMTSGNE
NEAPTLTGSIPQNGENKPPQAIVKPQVLTHVIEGFVIQEGAEPFPIERLPVMMDSPKKLH
EQLSSDPDKTPVSNPTNTTDSETEELTPQELKDQEDSDSPKLSCEFCGWVDFAYKFKGSK
RFCSMVCAKRYNVGCRKRIGLFHPERSKTSNRWHRRSHNSGHQSIDSKKQKLSPMPQQTQ
GGSVSSPIPSQPSQEESSPCSDMSSYEEPPSPLSAASSGPPAPQAVSLLAGRGSDQESPR
SRELPLLTQHFLPNDPTKWNVEEVYEFILSLPGCQEIADEFRTQEIDGQAMLLLKEDHLM
SAMNIKLGPALKIYASINMLKDS
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atggacagtgaacatgtgcctccagcctccagtgccagcagcactgggaccactgcctcc
agcacaagtaccaccagcagcagcagtgcggggaggcaggctgtgcctcacatctctgtg
tacagcgggattcctgacaggcagacggttcaggtaaacttcagggtgatccagcaggcg
ttgcaccggcagcccaacactgctgcgcagtacctgcagcagatgtacgcagcgcagcag
cagcacctcatgctgcagacagcagcactccagcagcagcacctgagcaatgcacagctc
cagaacctggccgccgtacagcaggccagtattgcggcaggaaggcagagctccacccaa
aatgccacttcgtcccagcaaacaggatcatcccagaccacagtgagtgcaattaacctg
accacgtccccggctgcagcccagctgatcagtagagcccagagtgtcagctctgcaccc
gccggcagcatctcccagcaggccgtaatcctgggaagcccgtccagccccaccagcctc
actgccagtcaggctcatatgtacctgcgtgcacagatggcacagcaaagtaaccttgtg
caagtagctaggagcctaggccgtgctgttccgttgtccccccagctcatcttcacacct
acggccacagtggctgcagtccagtctgagagctccatgcggtcctctggacaacagccc
tcctcacaggtccagaacctggctatccgtagccagcaaggggcgaccacgtcctcctct
cagacacacagcctgcaggccctcagcctaaagcagagccctatctccatccagccctct
cccctgattaagaaccccagccaggggagccagggcgctggggggaaaggcagtcggccc
gacggtgccttggacgggagcaagaagggagagagcatagtgacggaggtgcacgctata
aacatgagtcgcagtgtcacggctgttagtggacagcctctcagcactccagcatacacc
cagatccagccccactccctggtccagcagcacaaacagcagcagtttgtgatccagcag
acccaggcttcccagaggacccagggccagctactgcaaactgcctccatccagccacac
ctgcagactacccctctggtcccccattctcccagccagccaggccctatccctgtgctg
cccaaacccacctctcatcaccaacccactacacccagtcagcaggcaaccatctttcac
tccaccatcagcccacatgctctccactccaacctgagccaagccaaagcccagccagta
caactcacagccattaacctccagatacaaccagtgccctcacaggcttcccgattggtc
caggacagtaaagggcaggacaagcccacgtcattggtggtcagagagcgctgcccaact
accagagtacagcagcagtgtaccccatctgcccagtctccaccacaagccaccaagcca
acagagcagccaaagactgacccagtcacacccatcagccaaccacaaggagtcactact
accaacagggtgaatgctgcacctgggactccacctccagccatgacctcgggaaatgag
aacgaggcgcccactctgacagggagcatcccacagaatggggagaacaagccaccccag
gctatcgtcaagccccaggtcctcacccacgtcattgagggctttgtcatccaggaggga
gctgaacccttccctattgagcggttgcctgtgatgatggacagcccaaagaagctgcat
gagcagctctcctctgaccccgacaagactcctgttagtaaccccaccaacaccacagac
tctgagacagaggagctgacacctcaagaattaaaagaccaagaggattcagattctccc
aaactgagctgtgaattctgtggctgggtggactttgcctacaaattcaaggggtcaaaa
cggttttgttccatggtgtgtgcaaaaaggtataatgttggttgcaggaagcggataggc
cttttccatccagaaaggagcaaaacatccaaccgctggcacagaaggtcacacaacagc
ggccaccaaagtatcgattctaagaagcagaagctgtcccctatgcctcagcagacccag
gggggttcagtgtcctccccaattccctcccaacccagccaggaagagtccagcccctgc
tctgacatgtccagctatgaggagcctccgtcgcccctgtcagcagccagctcagggccc
ccagcaccccaggcggtgtcacttctggcagggagaggctcggaccaggagtccccccgg
agtcgagagctgcctctcctcactcagcacttcctgcccaacgaccccaccaagtggaat
gtggaggaagtatacgagttcattctctcccttccaggctgccaggagatagcagatgag
ttccgcactcaggagatagacgggcaggccatgctcctactgaaagaggaccaccttatg
agtgccatgaacattaaactgggacctgcacttaagatctacgcaagcatcaacatgctc
aaagactcttag
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