Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139413525
Help
Entry
139413525 CDS
T10872
Name
(RefSeq) beta-1,4 N-acetylgalactosaminyltransferase 1-like
KO
K00725
(N-Acetylneuraminyl)-galactosylglucosylceramide N-acetylgalactosaminyltransferase [EC:
2.4.1.92
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla00600
Sphingolipid metabolism
ocla00604
Glycosphingolipid biosynthesis - ganglio series
ocla01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
139413525
09107 Glycan biosynthesis and metabolism
00604 Glycosphingolipid biosynthesis - ganglio series
139413525
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ocla01003
]
139413525
Enzymes [BR:
ocla01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.92 (N-acetylneuraminyl)-galactosylglucosylceramide N-acetylgalactosaminyltransferase
139413525
Glycosyltransferases [BR:
ocla01003
]
Glycan extension
Glycolipid
139413525
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glycos_transf_2
FKRP_N
Motif
Other DBs
NCBI-GeneID:
139413525
NCBI-ProteinID:
XP_071017121
LinkDB
All DBs
Position
7:57099602..57120041
Genome browser
AA seq
531 aa
AA seq
DB search
MRSLRKTVLLAIVASVVLVMALLHSWPTRAYTTVDVWQRPGPAVERHLEERFPEPDHRSD
NIPYRVKESVAGLLARNGCVCEGESGGMKLPFAQLLFPRVSAHPMHTAFEASELEEMKKR
RAKEYQGFQMRSQTPADMLIVAEANNPLQYPTQGMEVRPLKTILIPGLAVQDHPRELYTV
NFTSTLGTLNVAAEVEGVKVKGDGEMHMTLTSSLLSNLNRQLQFVTYTNTLFHPSTADTV
QFETEGHQAMFTIKVRHGVTPKLYNTGPKGEYNISALVTIATKTFLRYDKLQDLIDSVRK
YYSTVTIVIADDSENPKMVSGPYIEHYIMPFGKGWFAGRNLAVSQVTTKYLLWVDDDFIF
TANTKLEKLVDVLEKTTLDLVGGAVREATGYTATYRQTMSIEPGEEEGDCLHMRRGFHHI
IQGFPNCVVTDGVINFFLARTDKVQQVGFDPRLARVAHLEFFIDGLGSLHVGSCDDVIVN
HATKIKLPWVSQSQSDKTYAKFRYPPASSDATHTKNGLLYFKNRFQCLTHN
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgcgttccttaaggaagacagtgttgttggccatcgtggcgtctgtggtgttggtgatg
gccctcctccattcttggcccacccgggcctacaccaccgtggatgtctggcagagacca
gggcctgcagtagagaggcacctggaggagaggttcccagaaccagaccacagatctgac
aacatcccctatcgtgtgaaggagagtgttgcaggtctgttggcacgtaacgggtgtgtg
tgtgaaggtgagagtgggggcatgaaactgccctttgcccagctgctgttcccccgggtg
tcggcccaccccatgcacactgcatttgaggcttctgagctggaagagatgaagaaacga
agggccaaggagtaccagggcttccagatgaggtctcagactcctgcagacatgctcatc
gtggccgaggccaacaatcctctgcagtacccaacacaggggatggaagtacggccactc
aaaaccatcctcatcccaggacttgcagtacaagaccatcccagagagctgtacacagtc
aacttcacctccaccctgggaacgttaaacgtggcagcagaggttgagggggtaaaggtc
aaaggtgacggggagatgcacatgaccctgaccagcagcctgctgtccaatttgaaccgg
cagctacagtttgtcacctataccaacacactgttccaccctagtacagcagacacagtg
cagtttgagacagagggtcaccaagccatgtttactatcaaggtccgtcatggtgtaact
ccaaaactctacaacacgggacccaaaggggaatacaacatcagtgcccttgttaccata
gcaaccaaaaccttcctgcgctatgacaagctccaagatctcatcgacagtgtgcgaaaa
tactattccactgtcaccatagtaatagctgatgatagtgaaaacccaaagatggtctct
ggcccttacattgaacattacatcatgccatttggaaagggctggtttgcaggacggaac
ctagccgtttctcaggtgactaccaagtatctgctgtgggtggacgatgacttcatcttc
acggctaacaccaagctggagaaactggtggacgtcttggagaagaccaccctggacctg
gtgggtggtgcagtgcgggaggccactggctatactgccacctacaggcagaccatgtcc
attgagccaggggaggaggagggtgactgcttgcatatgcggaggggcttccaccacatc
atccagggctttccaaactgcgtagtcacggacggggtcatcaacttcttcctggcccgc
acagacaaagtccagcaagtgggctttgacccccgtctggccagagtggcccacctggag
tttttcatcgatggcctcggctcgcttcacgtgggatcctgtgatgatgtcatcgtcaac
cacgccaccaagatcaagcttccctgggtcagccaatcacagagtgacaagacgtatgcc
aagttccgctacccaccagcctcttcggatgccacacacaccaaaaacggcctcctctat
ttcaagaaccgcttccagtgtttgactcacaattaa
DBGET
integrated database retrieval system
