Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139414059
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Entry
139414059 CDS
T10872
Name
(RefSeq) nuclear receptor subfamily 4 group A member 2-like isoform X1
KO
K08558
nuclear receptor subfamily 4 group A member 2
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocla03000
]
139414059
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ocla03310
]
139414059
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Zinc finger
Cys4 nerve growth factor IB-like
139414059
Nuclear receptors [BR:
ocla03310
]
4. Nerve growth factor IB like
4A. Nerve growth factor IB like receptor
139414059
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
139414059
NCBI-ProteinID:
XP_071018038
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Position
7:7186245..7190205
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AA seq
633 aa
AA seq
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MPCVQAQCGSSPQGASPASQQSASSFHAAGEHHSHNCDFLTPEFVKFSMDLTNTEITSAT
ITNLPNVGVFVDSYCNNSNYDVKPPCLFQMPHPGEQSSIKVEDIPMYHQQSHHHQPHQSD
EMVTPSGSVYYKPPSPHTQTFQSSPSHAWDDSGSLYSFHQDYLAVAHRMEQRKNAISRLS
LFSLKHSQTGSPLSACQMRFDGSLQVSVNSDTSGRYHGLESQGIFGSSSLRKQHKVGSPY
SFQLGHGHHFMDNQAPSPPSQGSPTNTDALCAVCGDNAACQHYGVRTCEGCKGFFKRTVQ
KNAKYVCLAGKNCAVDKRRRNRCQYCRFQKCLVTGMVKEVVRTASLKGRRGRLPSKHKIQ
DPLSPVSILNALVRAHVDSNPSLSRLDYSRFQNNADSQIDGDDTQHVQQFYDVLTVSMDI
IRDWAQKIPGFTDLPRPDQDLLFESAFLELFVLRLAYRSNPEEGKLIFCNGLVLHRLQCR
RGFGDWIDTIVEFSANLQSMNIDVATFSCICALATVTGRLIKPKVLNLCAYNAIGLSFET
NLHPVIVSERHGLKEPRKVEELQNKMVNCLKDKVTFNDGSVSRPNHLSKLLGKLPELRTL
CTQGLQRIFYLKLEDLVPPPAIIDKLFLDTLPF
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgccgtgcgtccaggctcagtgcggatcgtcgcctcaaggagctagtcccgcttcgcaa
cagagcgcaagcagcttccacgccgctggagagcaccacagccataactgcgacttccta
acgcccgagtttgtcaaatttagcatggacctgaccaacacagaaatcacatcagccact
atcaccaatcttccaaatgtcggtgttttcgtggacagctactgtaacaattcgaactat
gacgtcaaacccccttgtctattccaaatgccccatccgggggagcagtcatccatcaaa
gttgaggacatccccatgtaccaccagcagagtcaccaccaccagccgcatcagtccgat
gagatggtcactccctccgggtccgtttactacaagcccccctctccacacacacagaca
ttccagagttcacccagccatgcgtgggatgattctggatctctgtacagttttcaccag
gactacttggcggtggcgcacagaatggagcagcggaaaaatgccatatccagattatcc
ttgttttctctcaagcattcccaaaccggtagtcctttgtcggcgtgccagatgagattt
gacgggtccctccaggtgtccgtgaactcggatacctcaggcaggtatcatggcttggag
agccagggcatctttggttccagctccctaaggaaacagcacaaagtgggttccccctat
tcgttccagctcggtcacggacatcactttatggataaccaagcaccgtcgcctcctagc
caaggatcacccaccaacaccgatgctttatgtgcggtgtgtggggacaatgccgcctgt
cagcactacggcgtgcgaacctgcgagggctgtaagggattcttcaagcgcactgttcag
aaaaatgccaaatatgtgtgtttagctgggaaaaactgtgcagttgacaaacgccggaga
aacaggtgccaatactgccgtttccagaagtgccttgtcacgggaatggtcaaagaagtc
gtcaggactgcaagtttaaagggtcgacgtggccggttaccctccaaacataaaattcaa
gaccctttgtcacctgtcagcatccttaacgcgctagtgagggcccatgtggactccaac
ccctcattgtctcgactggactactcccgattccagaataatgctgacagccaaatcgac
ggagatgatacgcaacatgtgcagcagttctacgacgtcctgaccgtctccatggatatt
atccgggactgggcgcaaaagatcccaggttttaccgatctgccgagaccggaccaagat
ctcctcttcgaatcagccttcctggaactcttcgttctgcgtttggcttacaggtccaac
cctgaggaagggaagctcatcttctgcaacggattggttttgcacaggcttcagtgtagg
cgcggctttggagactggattgacaccatagtggagttctctgcaaaccttcaaagtatg
aatatagacgttgcaacattctcctgcatatgcgcccttgccacagtaacaggtaggcta
ataaaacccaaagttctgaatctatgcgcctataatgccattgggttaagttttgaaacg
aatttgcaccctgtcattgtttcagagagacatgggctgaaggagcccaggaaagtagag
gaacttcagaacaagatggtgaactgtttgaaagacaaagtgacttttaacgatggaagt
gtcagtcgaccaaatcacttgtcaaaactcttgggaaagctgcctgaacttcgcacgctg
tgtacacaaggtctgcagaggatattctacttgaaactggaagacttggtccctccacct
gcaataatagacaagcttttcctcgatactttgcccttttag
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