Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139415164
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Entry
139415164 CDS
T10872
Name
(RefSeq) multifunctional protein CAD-like isoform X1
KO
K11540
carbamoyl-phosphate synthase / aspartate carbamoyltransferase / dihydroorotase [EC:
6.3.5.5
2.1.3.2
3.5.2.3
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla00220
Arginine biosynthesis
ocla00240
Pyrimidine metabolism
ocla00250
Alanine, aspartate and glutamate metabolism
ocla01100
Metabolic pathways
ocla01240
Biosynthesis of cofactors
Module
ocla_M00051
De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
139415164
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
139415164
00220 Arginine biosynthesis
139415164
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ocla01002
]
139415164
Enzymes [BR:
ocla01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.3 Carboxy- and carbamoyltransferases
2.1.3.2 aspartate carbamoyltransferase
139415164
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.2 In cyclic amides
3.5.2.3 dihydroorotase
139415164
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
139415164
Peptidases and inhibitors [BR:
ocla01002
]
Cysteine peptidases
Family C26: gamma-glutamyl hydrolase family
139415164
Metallo peptidases
Family M38: beta-aspartyl dipeptidase family
139415164
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
GATase
CPSase_sm_chain
OTCace_N
OTCace
CPSase_L_D3
MGS
Dala_Dala_lig_C
ATP-grasp
ATPgrasp_Ter
Amidohydro_1
ATP-grasp_3
Peptidase_C26
GSH-S_ATP
Motif
Other DBs
NCBI-GeneID:
139415164
NCBI-ProteinID:
XP_071019142
LinkDB
All DBs
Position
8:complement(25042629..25066374)
Genome browser
AA seq
2262 aa
AA seq
DB search
MATLILEDGTTFKGRLFGANASVSGEVVFQTGMVGYPEALTDPSYRCQILTLTYPLQGNY
GIPQDEEGDFGLSKWFESSKIHAAALIVGEVSQNPSHWSSAMSLDQWLKEQGIPGLEGVD
TRSLTKKIREKGTMLGKLVVDGTSEDNVPFDNPDQRNLVKEVSMKEPLVFNPSGTVRITA
VDCGIKYNQIRCLCQRGACVTVVPWDHPLDSTDFDGLFISNGPGDPQFCKETINNVRKVV
CVDNPKPVFGICLGHQLLSLVIGAKTYKMKYGNRGHNQPCIHKGTDRCFITSQNHGFAVD
PLTLPQGWDVLFTNANDQTSEGIVHNTKHLFSVQFHPEHMAGPTDLVSLFDVFLDTVRDH
KEGKSGKPVKQRLTEHLTYPGSPKPEEFVRPRKVLILGSGGLSIGQAGEFDYSGSQAIKA
LKEENIQTVLINPNIATVQTSKGLADKVYFLPLTPEYVTEVIKNERPDGVLLTFGGQTAL
NCGVELTKRGVLEKYAVRVLGTPVASIEMTEDRKIFVEKMEEISEHVAPSEAALSVEQAV
AAAERLGYPVLVRSAFALGGLGSGFANNSEELTSLVTSAFAHTSQVLVDKSLKGWKEIEY
EVVRDAYDNCITVCNMENIDPLGIHTGESIVVAPSQTLNDYEYNMLRDTAIKVIRHLGIV
GECNIQYALNPESEQYYIIEVNARLSRSSALASKATGYPLAYVAAKLGLGIPLPVLKNSV
TNQTTANFEPSLDYCVVKVPRWDLSKFLRVSTKIGSSMKSVGEVMAIGRSFEEAFQKALR
MVDENCVGFDHTIKPVSDEELQTPTDKRIFVLAAALRAGYTVDRLYDLTKIDRWFLHKMK
NIADHEKVLESYNQDESAMPLEVMRKAKQLGFSDKQIALAVQSTELAMRKLRRDWSILPV
VKQIDTVAAEWPAQTNYLYLTYNGTESDLGFSEPHVMVIGSGVYRIGSSVEFDWCAVGCI
MELRKMGYKTIMVNYNPETVSTDYDMCDRLYFDEISFEVVMDIYEMENPEGVILSMGGQL
PNNIAMSLHRQQCRILGTSPEFIDSAENRFKFSRMLDTIGISQPLWKELTAIESAMKFCE
TVGYPCLVRPSYVLSGAAMNVAYTDSDLEKYLSSAVAVSKEYPVVISKFIQEAKEIDVDA
VACDGVVIAIAVSEHVENAGVHSGDATLVTPAQDINQKTMERIKMIVHAIGQELQVTGPF
NLQLIAKDDQLKVIECNVRVSRSFPFVSKTLGVDLVALATRVIMGEEVEPVGLMKGVGIV
GVKVPQFSFSRLAGADVVLGVEMTSTGEVACFGENRYEAYLKAMLSTGFKIPKKNILLSI
GSYKNKSELLPTVQALESLGYDLYASLGTADFYTEHGVKVMAVDWPFEEEESDCPNKDKQ
RNILEYLEDHHFDMVINLSMRNSGGRRLSSFVTKGYRTRRMAIDYSVPLIIDIKCTKLFF
QALRLVGGFPPVKTHVDCMTSQKLIRLPGLIDVHVHLREPGATHKEDFSSGTAAALAGGI
TMVCAMPNTAPAIIDLSSLTMVQKLAKAGCRCDYALYVGAASDNAAVLPSIASSAAGLKM
YLNDTYSTLKMDNVSVWMEHFEKWPKHLPIVAHAEKQTVAAILMVAQLYQRAVHICHVAK
KEEILIIRVAKQKGIQVTCEVAPHHLFLCEENVADIGDGRAQVRPMLGTREDMEALWEHM
DIIDCFATDHAPHSVEEKNSEKPPPGYPGLETMLPLLLTAVSDGRLTVDDIIKRLYDNPR
KIFSLPVQDNTYVEVDLEQEWVIPKHMQFTKSKWTPFEGMKVKGKVRRVVLRGEVAYIDG
QVLVPPGYGEDVKTWPAPIPTQPPEPVKEVQLTPEHPRLTSPCEGIRTRAPSPRRSAGDG
RYMLPPRIHRSSDPGVTPGFRTIHTKWRLDFVAEDSRERALRRAFEEDLREEMAPAAGDG
SSHPPPLARVLSPRAEAGLGVAVGQTLTHLQTSPLLHPLVGQHVLSVRQFSKEQISHLFN
VAHTLRLMIQKERTLDILKGKVMASMFYEVSTRTSSSFAAAMQRLGGSVVHFCEATSSSQ
KGESLADSVQTMSCYADVLVLRHPMPGAVESAARHCRKPVINAGDGVGEHPTQALLDVFT
IREELGTVNGMTITMVGDLKHGRTVHSLARLLTQYRITLRYVAPKNLHMPSEIIDFVASK
GIKQEEFESIEEALPDTDVLYITRIQKERFSSEEEYKACFGQFILTPHIMTGAKRKMVVM
HPLPRVNEISAEVDTDPRAAYFRQAENGMYIRMALLATVMGR
NT seq
6789 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccctgattttagaagatgggaccaccttcaagggacgccttttcggggcaaat
gcgtcggtgtctggtgaagttgtgttccagacaggcatggtgggctacccagaggccctg
actgacccgtcctacagatgtcagattctcaccctcacctaccctctgcagggcaactat
ggcataccccaggatgaggagggtgactttggactcagcaagtggtttgagtcttctaag
atccacgctgcagccctcatcgtcggagaggtctcccagaaccctagccactggagctca
gccatgtctctggaccagtggctcaaagagcagggcatccccggactagagggagttgac
acccgcagtctgaccaagaagatccgtgagaagggaaccatgctggggaagcttgttgtg
gacggaacgtcggaggacaacgttccatttgacaaccctgaccagaggaacctggtcaag
gaggtgtccatgaaggagcccctggtgttcaaccccagtggtactgtcaggatcacagca
gtagactgtggcattaagtacaaccagatccgctgcctgtgtcagagaggggcctgtgtc
actgtggtgccctgggatcacccactggacagcacagattttgatgggctattcataagc
aatggccctggggacccccagttctgtaaggagaccataaacaacgtgaggaaggtggtg
tgtgtggataaccccaagcctgtgtttggtatctgcctgggccaccagcttctctccctt
gtcatcggagcaaaaacctacaaaatgaagtatggaaatcgtggccataaccagccctgc
atccacaagggcacggatcgctgtttcatcacatctcagaaccatggctttgctgtggac
cctctcaccctgcctcagggctgggacgtgctcttcaccaacgccaatgaccagaccagt
gagggcattgtgcacaacaccaaacacctattcagtgttcagtttcacccagagcacatg
gcaggccccactgacctggtcagtctgtttgacgtgtttctggacacggttagagaccac
aaggagggcaagagtggcaaaccagtgaagcagagactgacggagcacctgacctaccct
gggtctcccaagccggaagagtttgttcggccacgcaaggtcctgatcctgggctctggg
ggcctctccatcgggcaggctggggagtttgattactctggctctcaggccataaaagca
ttgaaggaggagaacattcagactgtgctcatcaaccccaacatcgccacggttcagacc
tccaagggactggctgacaaggtttacttcctacctctcaccccggagtacgtcactgag
gtgataaagaatgaacgtccagacggggtcctcctgaccttcggggggcagactgctctg
aactgtggggtggagctgaccaaaaggggtgtcctggagaagtatgcggtgcgtgtgctg
gggacaccagtggcctccatcgaaatgactgaggacaggaagatctttgtggagaagatg
gaggagatcagtgaacacgtggcgcccagcgaggctgctctgtctgtggagcaggcggtg
gcggctgcagagcgtctaggctaccctgtcctggtgcgctctgcctttgccctgggcgga
ctgggctctggcttcgccaataacagtgaggagttgacctctctggtgacctctgccttc
gcccacacctcccaggtcctagtggacaagtccctgaagggctggaaggagatcgagtat
gaagtggtcagagacgcctacgacaactgtattaccgtatgtaacatggagaacattgac
cctctgggtatccacactggggagtcgatcgtggtggcgcccagtcagacgctcaacgac
tacgagtacaacatgttgagggacaccgccatcaaggtcatccgacacctgggcatcgtg
ggagagtgtaacatccagtacgccctcaacccggagtctgaacagtactacatcattgag
gtgaatgcccgtctgtctcggagctcagctctggccagtaaagctacaggatatcctctg
gcctacgtggctgccaagctgggactgggcatccctctacctgtactcaagaactcggtg
accaaccagaccacggctaactttgaacccagtctggactactgtgtggtgaaggtacct
cgctgggatctcagcaagttcctccgtgtcagcaccaagataggcagctccatgaagagc
gtgggagaggtgatggcaatcggccgcagctttgaggaagccttccagaaggctctacgg
atggtggatgagaactgtgtgggctttgaccacaccatcaaaccagtgtctgacgaggag
ctgcagaccccgacagacaagcgtatctttgtgctggcggctgctctgagggcgggctac
acagtggaccgcctgtacgacctgaccaagatcgaccgctggtttctccacaagatgaag
aacatcgcggaccatgagaaggtgctggagtcgtacaaccaggacgagagcgccatgcct
ctggaggtgatgaggaaagccaagcaactgggcttctcagacaaacagatcgccctggct
gtgcagagcacggagcttgcgatgaggaagctgcgacgtgattggagcatcttgccggtg
gtgaagcagatcgatactgtggcagcagagtggccagcccagaccaactacctgtacctg
acctataacggaacagagagcgacctgggctttagcgagccccatgtaatggtgatcggc
tccggcgtttaccgcattggcagcagtgtggagtttgactggtgtgctgtgggctgcatc
atggaactcaggaagatgggctataaaaccatcatggtgaactataacccagagactgtc
agcacagactacgacatgtgtgaccgtctctacttcgatgagatctcctttgaggttgtt
atggacatctatgagatggagaacccagagggagtaatcctgtccatggggggccagctg
cccaacaacattgccatgtccctccacaggcagcagtgtcgcatcctgggcacctccccg
gagttcatcgactctgctgagaacaggttcaagttctcccgcatgctcgacaccatcggc
atcagccagcccctgtggaaggaactcacagcgattgagtcggccatgaagttctgtgag
accgtgggctacccgtgtctggtgcgtccctcctacgttctgagcggagcagccatgaac
gtggcgtacacagacagcgacctggagaagtacctgagcagcgctgtggccgtgtccaag
gaataccctgtggtaatctccaagttcatccaggaggccaaggagatagacgtggatgcg
gtggcatgtgacggtgtggtgatagccatcgccgtgtcagagcatgtggagaacgctggg
gtgcactctggggacgccaccctggtcacgcccgcccaggatatcaaccagaagaccatg
gagcgcatcaagatgatcgtccacgccatcggtcaggagctgcaggtcaccgggcccttc
aacctgcaactcatcgctaaggatgaccagctgaaggtgatcgagtgcaacgtcagagtc
tcccgctccttcccgttcgtctcgaagacactgggagtggatctggtcgccctggcaaca
cgtgtcatcatgggagaagaggtggagcctgtgggcctgatgaaaggagtgggcatcgtg
ggcgtcaaggtcccccagttctcgttctctcgtctggctggggctgatgtggttctgggg
gtagagatgaccagcactggggaggtggcctgctttggagagaacagatacgaggcctac
ctgaaggccatgctcagcacaggcttcaagatccccaagaagaacattttgctctccatc
ggcagttataagaacaagagtgagctactgcctactgtacaggctctggagagtctaggc
tatgacctgtatgccagtctggggaccgctgacttctacactgagcatggagtcaaggtg
atggcagtggactggccgtttgaggaagaggagagcgactgccccaacaaggacaagcag
aggaacatcttggaatacctggaggaccaccactttgacatggtcatcaacctctccatg
aggaactctggaggccgacgcctctcctcctttgtaaccaaaggttaccgcacccgccgc
atggccatcgactactcagtccccctcatcattgacatcaagtgcaccaagctatttttc
caggcgctgcgtctggttggaggctttccgcccgtcaagactcacgtggactgtatgacg
tcacagaagttgattcgcctgcctggtctgatagatgtgcacgtccacctgcgggagccg
ggtgccactcacaaggaagacttctcctcgggcacagcggctgccctagcagggggcatc
accatggtgtgtgccatgcccaacacggcacccgccatcattgacctcagctctctcacc
atggtccagaagcttgccaaggcagggtgtcgctgtgactatgccctctatgtcggggcg
gcttcagacaatgctgctgtcttaccctccattgccagctccgccgctgggctgaagatg
tatctgaacgacacctactccactctgaagatggacaatgtctcagtttggatggaacac
tttgagaaatggcccaagcacctaccaatcgtggctcacgcagagaagcagacggtggca
gccatcttgatggtggcccagctctaccagagagctgttcatatctgccacgtggccaag
aaggaggagattctgatcatccgcgtggccaagcagaaaggcatccaggtgacgtgtgag
gtggcgccccatcacctcttcctgtgtgaggagaacgtggcggacatcggggacggccgg
gcgcaggtacgccccatgctgggaacccgggaggacatggaggccctctgggaacacatg
gacatcattgactgcttcgcaaccgaccacgccccccattcagtggaggaaaagaactca
gagaagccccccccaggctaccctggcctggagaccatgctgcctctcctcctcaccgcc
gtcagcgacgggcgcctcaccgtcgacgatatcatcaagcgcttgtacgacaacccccgc
aagatcttctccctgcccgtacaggacaacacttatgtagaggtggacctggagcaggag
tgggtcatccccaaacacatgcagttcaccaagtccaagtggacgcctttcgaaggcatg
aaggtgaagggcaaggtccgcagagtggttctcagaggagaggtggcctacatcgacgga
caggtgctggtccctcctggttatggagaggatgtgaagacttggcctgcacccatcccc
acccagccccctgagccagtgaaagaagtccaactgaccccagagcacccgcggctgacc
tcgccgtgtgagggcatccgtacccgcgccccgagccctcgccgctccgctggggatggc
cgctacatgctcccaccccgtatccacaggtcgtctgacccgggcgttacaccaggtttt
aggacaatacacacaaaatggcgcttggatttcgttgctgaagattcaagggaaagagca
ttaagaagagcatttgaagaagatttaagagaagagatggcccctgcagctggggatggc
tccagccatccccctcccctggccagggtcctgtccccccgggctgaggcagggttgggg
gtagcggtagggcagaccctgacccacctccagacctcccccctactgcaccccctagtg
ggacaacacgtcctctctgtcaggcagttcagcaaggaacagatttctcacttgtttaat
gtggcccatactcttcgcctgatgattcagaaagagagaaccctggacatcctgaagggt
aaggtgatggcgtccatgttctacgaggtcagcacgcgcaccagcagctcgtttgcggcg
gccatgcagcgtctgggcggctctgtggtccatttctgcgaggccacctcctcgtcgcag
aagggtgaatctctggccgactcggtccagaccatgagctgctatgctgacgttctggtg
ctccgacaccccatgccaggggctgtagagtctgcagcgaggcattgccggaagccagtg
atcaacgctggggacggggtcggggagcaccccactcaggccctgctggatgtgttcacc
atcagagaggagctgggcacggtcaacggcatgacgatcaccatggtaggagacctgaag
cacggacgcaccgtgcattccttggccaggctgctcacccagtacaggatcactctgcgc
tacgtcgccccaaagaacctgcacatgccctccgagatcatcgactttgtggcctccaaa
ggcatcaagcaggaagagtttgagagcatcgaggaggcactgcctgacactgacgtgctc
tacattaccaggatccagaaggagaggttttcctcagaggaagagtacaaagcgtgcttc
ggtcagttcatccttaccccacacatcatgactggagccaagaggaagatggtggtgatg
catcctctaccgagagtcaatgagatcagtgcggaagtggacacagatcctcgtgctgcc
tacttccggcaggctgagaacggcatgtacatccgcatggccctcctggccacagtgatg
ggtagatga
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integrated database retrieval system
