Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139415665
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Entry
139415665 CDS
T10872
Name
(RefSeq) otoferlin
KO
K19949
otoferlin
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
Membrane trafficking [BR:
ocla04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
139415665
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139415665
NCBI-ProteinID:
XP_071019886
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Position
8:complement(38453025..38606487)
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AA seq
2060 aa
AA seq
DB search
MALLVHLKTIRDLRGKGDRIAKVTFRGLSLYTHVLENCEDEARFDETFRWPIASRVDENE
MLEVQVFNYSKVFTNRVIGTFKMVLQKVAEEGQLEVTDTLIDDNNTAIRASVTLYIKYTT
MDGTVGVWSDGEFLDIPGDPEGTFQFETDSLLSGHSQGSGVSQGRSIHGIPTFRKAGKGV
FSAMKLGKTKSSKDDHKKDEPAILDMEDLNRKAMRLGGVGGLDPDCISLASVTAVTTNVS
NKRSKPDIKMEPSSGRPVDYQISITVVEARQLVGLNMDPVVCVEIGDDKKYTSMKESTNC
PYYNEYFVFDFHVPPDVMFDKILKLSVIHSKNLLRSGTLVGTFKLDVGTVYSQPEHQFYH
KWATLSDPNDITAGCKGYIKCDIAVVGKGDNIKTPHKANETDEDDIEGNLLLPEGVPLER
QWARFYVKIYRAEGLPKMNTSIMANVKKAFIGENRDLVDPYVQVLFAGQRGKTSVQKSSY
EPIWNEQVVFTEMFPPLCKRMKVQIRDSDKVNDVAIGTHLIDLRKIANDGDKGFLPTMGP
AWVNMYGSTRQYTLMDEHQDLNEGLGEGVSFRARLLISVAVEILDTTSTEIVSSTEVQVE
PVSNISESVTGKIEEFFLFGSFLEATMIDRKIGDKPISFEVTIGNYGNQIDGVSKPSAAK
KKKKEGGGGGGESDEEESELIQQNSSEDEADDDGDLVSVSSSPPMKPVITDRNYFHLPYF
EKKPCIYIKSWWQDQRRRLYNSNIMDKIADKLEEGLNDVQEIIKTETAYPERRLRGVLEE
LSTGCNRFVTLANKDQNQAGRTKLDKERLKSCMREMESMGQQAKLIRSQVKRNTVRDKLK
MVQNFLHRLRFLADEPQHSIPDVFVWMMSSNKRIAYARIPSKDILYSIVDEETGKDCGKV
KAVFLRLPGKKGFGPAGWTVQAKMEMYLWLGLNKQRKDFLSGLPNGFEENKAPRTGSCLQ
SLPPISLVYNMKQVFQLRAHMYQARSLFAADSSGLSDPFARVFFSTHSQVTEVLSETLCP
TWDQLLVFDDVELFGEAGELRDDPPIIVVEVYDQDTVGKAEFIGRTFAKPITKMCDEHYG
PPRFPPQLEYYQIYRGNSTAGDLLAAFELLQIPYDHEEIRRALIAVHDFAVPQIKIGQGG
RAELPAINGPTDSDRGPILPVPMGIRPVLSRYRIEVLFWGLRDLKRVNLAQVDRPRVDIE
CAGRGVQSALIVNFKKNPNFSTLVKWFEVDLPENELLHPPLNIRVVDCRAFGRYTLVGSH
AVTSLRRFIYSPPDKTQNNWASAARLMNGYMVLTNGGSQSRPSSPYSRTLPHTLSHPTGD
VIVNMDANPSVRKMDTVVKLDASSDAVIKVDVNEEEKEEKKKKKKKKKGEVEEDDETEER
MLDWWSKYFASIETLMEILRAQEAALAEAEEREEQEIAAEGADIKPDDLPVKGSKGKEKS
RDKSRNKDKKKSHHAGEGTEKRPSKPKVNELLVYNKELEAEYDNFEDWLHTFNLYRGKAG
DDDEAALDDDRIVGRFKGSMCMYKLPLSEEITREAGFDPNMGMFQSIPHNDPINVLVRVF
VVRATDLHPADVNGKADPYVVIKLGKSELKDKENYISKQLNPVFGKAFDMEATFPMESML
TVSVYDWDLVGTDDLIGETKIDLENRYYSKHRATCGIANNYSVHGYNMWRDPMKPSQILA
KLCKEGKLDGPHYGPGGRVKVANRIFMGATEIEDETGLKKQTDEHLALTVLKHWEEIPRV
GCKLIPEHVETRPLFHPEKPGIEQGRIEMWVDMFPMDMPAPGPAIDISPRKPKKYELRVV
IWNTDEVILEDDDYFTGEKSSDIFVRGWLKGQQEDKQDTDVHYHSLTGEGNFNWRFVFPF
DYLMAEEKIVISKKESMFSWDETEYKIPARLTLQVWDADHFSADDFLGAIELDLNRFPRG
AKTAKQCSIGMVQNEAELPCISIFKQKRVKGWWPFVARDENDEMELTGKVEAELHLMSAE
EAEKSPVGLGRNEPDPLEKPNRPDTSLMWFVNPLKSIRYFIWHNYRWLILKALGLLLLLL
LLGLFLYSFPGYLVKKMLGA
NT seq
6183 nt
NT seq
+upstream
nt +downstream
nt
atggctcttctagtccaccttaagacgatccgggaccttcgtggaaagggggacagaatc
gccaaagtcacatttcgaggtctgtcgctctacacgcatgtgctggaaaactgtgaggat
gaggccagatttgatgagacgttccgatggccgattgcaagtagagtggatgaaaatgag
atgctggaagttcaagtgttcaactacagcaaagtcttcaccaacagagtcattggaacc
ttcaagatggttctacagaaggtggcagaggagggccagctagaggtgacagacacactc
atcgacgacaacaacaccgccatcagggccagtgttaccctatacatcaagtacacaacg
atggatgggactgtgggggtttggagtgacggagaattcctggacatcccgggtgacccg
gagggaacgttccagtttgagacggacagtctgctctccggacacagccaggggtcagga
gtgtcacaggggcgatccatccatggaattcccacttttaggaaagcagggaagggggta
ttctcagccatgaagctcggcaagaccaagagctccaaggatgaccacaagaaagatgag
ccagccatcttggacatggaggatctgaacaggaaggccatgcgtctgggaggggtgggg
ggtctggacccagactgcatctccctggcctccgtcactgccgtcaccaccaatgtctcc
aacaagagatcaaagcctgatatcaagatggagcctagttctgggaggcctgtggattac
cagattagcatcacagtcgttgaggccaggcagctggttggccttaacatggaccctgtg
gtctgtgtggagattggggacgacaagaagtacacctccatgaaggagtccactaactgc
ccctactacaatgagtattttgtctttgacttccacgtcccaccagatgtcatgtttgac
aagatcctgaagctctcagtgatccactctaagaacctgctgcggagtggcaccttagtt
ggaactttcaagctggatgttggcacagtctactcccagcctgagcaccaattctaccac
aagtgggccacactgtctgaccctaatgacatcacggccggctgcaaaggttacatcaag
tgtgacatcgccgtggtggggaagggggacaacatcaagactccccacaaggccaacgag
acagatgaagacgacatagaagggaacctccttcttccggagggtgttcccttggagaga
cagtgggcacgattctacgtgaagatctaccgcgctgagggccttcccaagatgaacacc
agcatcatggccaacgttaagaaggccttcataggggagaacagagacctggtggacccc
tacgtacaagtgctcttcgccggacagagagggaagacgtcggtccagaagagtagttat
gagccgatctggaatgagcaggtggtcttcactgagatgtttcctccgctctgcaaacgc
atgaaggtccagataagagactccgacaaagtcaatgacgtcgccataggaacacactta
attgacctgcgaaagattgccaatgatggtgacaaagggttcctgcccaccatgggccca
gcctgggtcaacatgtatggctccacccgccagtacactctgatggatgagcaccaggac
ttgaatgaggggctgggggaaggcgtgtccttcagggcccgcctcctcatctccgttgcc
gtggagatcctggacaccacctccactgagattgtaagctccaccgaggtgcaggtggag
cctgtctctaacatctcagagagtgttacagggaaaatagaggaattcttcctgtttggt
tccttcctggaggccaccatgatcgacaggaagatcggcgataagccaatcagcttcgag
gtcacaataggcaactacggcaaccagatagatggagtgagcaagccctcggcagctaag
aagaagaagaaagagggaggaggaggaggaggagaaagtgatgaggaggagtcagagctg
atccagcagaactccagtgaggacgaggcagatgatgatggggacctggtgtctgtgtcc
tcctccccacccatgaaacctgtcataacagacaggaactacttccacctgccctacttt
gagaagaagccgtgtatctacatcaagagctggtggcaggaccaaaggagaagactttac
aactccaacatcatggacaagatcgctgacaaactggaggagggtctgaatgatgtgcag
gagatcatcaagacagagacagcctatccagagcgcagactcagaggggtgctggaggaa
ctcagcactggctgcaatcgtttcgtcactttggccaacaaggaccagaaccaggcaggc
agaaccaaactggacaaagagagactcaagtcctgcatgagagagatggagagcatgggc
cagcaggccaagctgattcgctcccaggtgaagaggaacacagtgagagacaaactgaag
atggttcagaacttcctgcacaggctacgtttccttgccgacgagccccagcatagtatc
ccagacgtgtttgtatggatgatgagtagcaacaagcgtatcgcctacgcccgcatcccc
tccaaagacatcctctactccatcgtagacgaggagacaggcaaggactgtggcaaggtc
aaagctgtcttcctcaggctgcctggtaagaaggggtttggtccagccgggtggacagtg
caggctaagatggagatgtacctgtggctgggcctcaacaaacagaggaaggacttcctg
tctggcctgcccaacggctttgaagagaacaaggctcccaggacaggctcatgtctgcag
tctttaccccctatcagtctggtttataacatgaagcaggtattccagctgagggctcac
atgtaccaggccaggagtctgtttgctgcagacagcagtggcctgtcagaccccttcgcc
agggtcttcttctccacacacagccaggtcactgaggtcctgagtgagactctgtgccct
acgtgggatcagctgctggtgtttgatgatgttgagctgttcggggaggccggcgagcta
cgagacgacccacctatcattgtggtagaggtctacgaccaggacactgtgggcaaggca
gagttcattggtcgtacgtttgctaagcccatcactaagatgtgtgacgagcactacgga
cccccgaggttcccccctcagctagagtactaccagatctaccgtggtaactctaccgcc
ggtgacctactggctgccttcgagctgctacagattccctatgaccatgaggagatcagg
agggctctgattgctgtccatgactttgcagttcctcagattaagattgggcaagggggg
agggcggagcttcctgccatcaatggtccgacagactcagaccgtggacccatcctccct
gtgccaatgggcatcagacctgtcctaagccgttatcgaatagaggttctgttctggggc
ctgcgggacctgaagagggtgaatttggcccaggtggacagacccagggtggacatagag
tgtgcagggagaggagtccagtctgcactcatcgtgaacttcaaaaagaaccccaacttc
agcacactggtcaagtggttcgaggtggacctgccagagaacgagctgctccaccctcct
cttaacatccgggtagtggactgcagggcgtttggccgatacaccctggtgggttcccac
gccgtcaccagcctacgacgcttcatctacagccccccagacaagacgcaaaacaactgg
gccagcgcagctagactgatgaatgggtacatggtcctgaccaacggggggtcccaatct
cgcccctcctccccttactcccgcaccctgccccacaccctctctcaccccacaggtgat
gtcatagtcaacatggatgccaacccctcagtcaggaaaatggacacggtggtgaagtta
gatgcttcgtctgatgcagtaattaaagttgatgtgaatgaggaggagaaagaagagaag
aagaagaagaagaagaaaaagaagggagaggtggaggaggacgatgagaccgaagagaga
atgctggactggtggtccaaatattttgcttccatagagacactgatggagatcctcagg
gcccaggaggcagctctggctgaggccgaggagagggaggagcaggagatagcagcagag
ggagcagatatcaaacctgatgacctccctgtaaaaggctccaaggggaaggagaagagc
cgagacaagagcaggaacaaggacaagaagaagagtcaccatgcaggagaggggacagag
aaacgccccagcaaacccaaagtgaacgagctgctggtgtacaacaaggagttggaggca
gagtatgataactttgaggactggctccataccttcaacttgtacagagggaaggcaggg
gacgacgatgaagcagccctggatgacgacaggatcgtgggcagattcaagggctccatg
tgcatgtacaagctgcctctgtctgaggagatcacccgggaggcgggcttcgaccctaac
atgggcatgttccagagcattccacacaatgacccaatcaatgtgctggtgcgagtattc
gtggtcagggccacagacctccatcctgctgatgtcaatggaaaagcggacccctacgtc
gtcatcaaactgggcaagtcagagctgaaggataaagagaactatatctccaaacagctc
aaccctgtctttggcaaggcgtttgacatggaggctacgttccccatggagtccatgttg
accgtgtcagtgtacgactgggatctggtgggcactgatgacctcatcggggagaccaaa
atcgacctggagaaccgctactatagcaaacacagagctacctgtggcatcgctaacaac
tactctgtgcatggttacaacatgtggcgtgaccccatgaagccaagccagatcctggcc
aagctctgtaaggagggcaagctggacggaccccactacggccccgggggaagggtcaag
gttgccaaccgtatcttcatgggtgccacagagatcgaggatgagactggtctaaagaag
cagacagatgagcacctggcgctgacggtgctgaagcactgggaggagatccctagggtg
ggctgtaaactcatcccagaacacgtcgagacaagacccctgttccaccctgagaaacct
ggcatcgaacaggggcggattgagatgtgggtagacatgttccccatggacatgccagca
cctggacccgccattgacatatcaccacggaaaccaaagaaatatgagctcagggtggtt
atatggaatacagacgaagtaatactcgaggacgatgattacttcactggggaaaagtcc
agtgacatatttgtcagggggtggctgaaagggcaacaggaggacaaacaggacacagat
gtccactaccactctctgacaggcgaggggaatttcaactggcgcttcgtgttccccttt
gactacctgatggccgaggagaagattgtcatctctaagaaggagtccatgttctcctgg
gatgagacagagtacaagatccctgcacgcctcaccctgcaggtctgggacgctgaccac
ttctccgctgatgacttcctaggtgcaatagagctggacctgaacaggtttccccgcggg
gcgaagacagccaagcagtgttccataggcatggtccagaatgaggctgagctgccctgc
atttccatcttcaaacagaagagagtcaagggctggtggccattcgtggcccgcgacgaa
aacgacgagatggaactcacgggtaaagtggaggcggagcttcatctgatgtcggcagag
gaagcggagaaaagtcctgttggtctgggacgcaatgagcctgaccctctggagaaacca
aatcgcccagacaccagtctcatgtggtttgtgaaccctctgaagtccatccgctacttc
atctggcacaactaccgctggctgatcctcaaggccctgggcctgctgctgctgctgctc
ctgctcggcctcttcctctactccttccctggctacctggtcaagaagatgctgggggcc
tga
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