Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139416071
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Entry
139416071 CDS
T10872
Name
(RefSeq) nectin-4-like
KO
K06593
poliovirus receptor-related 4
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
ocla04520
Adherens junction
Brite
Cell adhesion molecules [BR:
ocla04515
]
Immunoglobulin superfamily
Nectin family
139416071
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139416071
NCBI-ProteinID:
XP_071020426
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Position
9:20816912..20848213
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AA seq
630 aa
AA seq
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MTSHLGRLTPLLWILWSFIAVVQGDFVEPSLPYSFDSLAEAETRLPCQFKVEVGQVVVQV
TWTKEKADGTKDQIITVHHTDGHTEFGQYSGRVRFSSRKPTVDSSLIIMNTVESDEGRYN
CHISTFPSGNFERQLSLTVWTTPISSLDPVILVEGQSFQLAASCRSVARPPPNLSWDTEL
PGQSHNRSLEGGSVSTHFSLHPLRSMDGKRLDCLVTHPALKEPRRITNNLVVHYPPNAEI
SGFDQNWYAGLEEAALSCVSGGNPKPQSFNWTRKGRDLPEGVTTGNGSLLFNRPLILTDA
GIYQCVAMNSVGADNAEVEITVTELPQKQASFDSLLMVIVGGVAGVLLLVMIIIVISVTR
HHKRKNKKLSRELTVRKEEISTLSRQASFRKMNSVSMDTRGQTEEDIPLRVEGTLRTSLS
SVVEQGRIRKSRSTLVGGGGQDYLGRPVLYNSSRRGRESRAMDREEENRLRVESNEQNST
MSLSNHLHPPLQPSPFPMEQSVELLRSLTGSAIIPTEWGLHIRQGPGSRNTHSPLSCNNP
PITDDEDEDEGVEGEWETCPRMSPLDQGRSEDQDSKTNSSQISEVECGLNPHFQQNNGTL
RPKPLPKYQPNGILLTSSPHASFIHKAQIV
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgacatctcacctgggcagactgacaccactgctgtggatcctttggagtttcatcgct
gtggtgcagggggactttgtggagccctctctcccgtactccttcgactccctggctgag
gctgagacccggctgccctgccagttcaaggtggaagtgggccaggtggtggttcaggtc
acctggaccaaggagaaagcagatggcaccaaggaccagatcatcacagtacaccacacc
gacggacacacagagtttggtcagtactcagggcgtgtgcggttcagcagcaggaaaccc
accgtggactcatccctgatcatcatgaacaccgttgagtcagatgagggcaggtacaac
tgtcacatcagcaccttcccctcggggaacttcgaacgacagctgtcactcaccgtgtgg
accacgcccatttcctccctggaccctgtgatccttgtcgaaggccagtccttccaattg
gctgcatcctgccgctctgtggcccgccctccgcccaacctctcctgggacacagaacta
ccaggccaatcacacaacaggagtttggagggtggttcagtctccacccacttctctctg
catcccctgaggagtatggatgggaagaggctggactgtctggtgacgcacccggctctg
aaggaaccacgcaggatcacaaacaacctggtggtgcactatcctcccaatgcagagatc
tctgggtttgatcagaactggtatgctggtctggaggaagctgccctcagttgtgtcagt
ggaggaaaccccaaaccacagagtttcaattggaccagaaagggcagagacctaccagag
ggcgtgaccacagggaatggatccttgctgtttaatcggcccctcatcctgacggacgct
ggcatctaccaatgtgtggccatgaactctgtgggggcggataacgcagaggtggagatc
actgtgacagagttgcctcagaagcaggcgtcgttcgacagtctcctgatggtaatagtg
ggaggagtggccggagtactgcttctagtcatgatcatcatagtcatctctgtgacccgt
caccacaaacgcaagaacaagaaactgtcgagggaactcactgtgaggaaggaggagatc
agtactctctccagacaggcatctttcaggaaaatgaactcagtcagtatggacactaga
ggacagacagaggaggatatccctctcagagtggaggggacactgcggaccagtctgtcc
tccgtagtggagcaagggcgcattaggaagagtcgatctactctggtagggggcgggggg
caagactacctgggtcgacctgttctgtacaattcttcacgaagagggagggagagcaga
gccatggacagagaggaggagaacagacttagggtggagtcaaatgagcagaacagcacc
atgtctttgtcaaaccatctccacccccctctccaaccctctcccttccccatggaacag
tccgtcgagctgctgaggtccctgaccggcagtgccatcatcccaacggagtggggttta
catataagacaggggcccggtagcaggaacacccactcccctctcagttgcaacaacccg
cccatcacagacgacgaagacgaggatgaaggtgtggagggggagtgggaaacgtgcccg
aggatgagtccgttggatcaggggaggtcagaagaccaggacagcaagaccaacagttct
cagatctcagaagtagaatgtggactcaaccctcacttccagcagaacaatggaacattg
agacccaaaccgctccccaaataccagcccaatggcatcctcctcacctcatcaccacac
gcctccttcatccacaaggcccagattgtatag
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