Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139416161
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Entry
139416161 CDS
T10872
Name
(RefSeq) transcription factor p65-like
KO
K04735
transcription factor p65
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04010
MAPK signaling pathway
ocla04137
Mitophagy - animal
ocla04210
Apoptosis
ocla04218
Cellular senescence
ocla04620
Toll-like receptor signaling pathway
ocla04621
NOD-like receptor signaling pathway
ocla04622
RIG-I-like receptor signaling pathway
ocla04623
Cytosolic DNA-sensing pathway
ocla04625
C-type lectin receptor signaling pathway
ocla04920
Adipocytokine signaling pathway
ocla05132
Salmonella infection
ocla05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
139416161
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
139416161
09143 Cell growth and death
04210 Apoptosis
139416161
04218 Cellular senescence
139416161
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
139416161
04621 NOD-like receptor signaling pathway
139416161
04622 RIG-I-like receptor signaling pathway
139416161
04623 Cytosolic DNA-sensing pathway
139416161
04625 C-type lectin receptor signaling pathway
139416161
09152 Endocrine system
04920 Adipocytokine signaling pathway
139416161
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
139416161
09171 Infectious disease: bacterial
05132 Salmonella infection
139416161
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocla03000
]
139416161
Transcription factors [BR:
ocla03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
139416161
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Motif
Other DBs
NCBI-GeneID:
139416161
NCBI-ProteinID:
XP_071020608
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All DBs
Position
9:26811899..26823849
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AA seq
614 aa
AA seq
DB search
MDGIYGWEQPPLNQGNPFIEIIEQPKQRGMRFRYKCEGRSAGSTPGEKSNDTTKTHPAIK
VHNYNGPLRVRVSLVTKNPPHKPHPHELVGKDCKHGYYEADLQERRVHSFQNLGIQCVKK
KDVAEAVSCRLQTQNNPFNIPEANMWEEFDLNAVRLCFQASITLPTGELCPLEPVVSQPI
YDNRAPNTAELKICRVNRNSGSCIGGDEIFLLCDKVQKEDIEVRFFQGSWEGKGTFSQAD
VHRQVAIVFCTPPYCDTNLTEPIRVKMQLRRPSDREVSEPMDFQFLPSDPDEYRLMEKRK
RTEGMLQNLKLGSLMSGTMPAETRPFNIARRTVTAKPAASQPVMNPVVPPSAFSVKPQPY
YNGPQPGKLFQTQPKSEASSTTAETWKFLNSLTLDSQPKATPVASFTTNPQASAATAASS
QAFPTVNLLDFNGFAFHNFACPQEPVSAAPTPEPTSTFGVQGSQFKVDEELPEFPSFSEA
QAPGTLDSINIEEFQAMLGQSCLAGEGPKSSEASAPQAPCHLPSTNTVANNNAAQNQADP
ANHHTGCGGSTWMNYPNSIVSLLHNEGMMDSSPSNASQPAALDDLDVLSSMDEDRLMSIL
NSGNQYSFVPGHQT
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atggatggaatttatggatgggaacagccccctttgaaccaaggtaatcccttcattgag
atcattgaacagcccaagcagaggggcatgaggttcaggtacaagtgtgaggggcgctct
gctggaagcaccccgggagagaagagcaatgacaccaccaagacacaccccgccattaag
gtgcacaactacaatggccccctgcgtgtccgcgtctccttggtgaccaagaacccacct
cacaagccccacccccacgaactggtggggaaagactgcaaacatggttactatgaggca
gacctgcaggagagacgagtacacagttttcagaacctgggcattcagtgtgtgaagaaa
aaggatgtggccgaggcagtttcctgtaggctacagacccaaaacaaccccttcaacatt
cctgaggcgaacatgtgggaggagtttgacctaaatgcagtgaggctgtgtttccaggcc
tcgatcactctgcctaccggggaactctgccctctggagcccgtggtgtcccagcccatc
tacgacaacagagcacccaacacagcagaactgaagatctgtcgagtgaacagaaactct
ggaagctgcatagggggggatgagatcttcttactttgtgacaaagtgcaaaaagaggac
atcgaggtgcggttcttccagggctcgtgggaggggaagggcaccttctcccaggcggac
gtacacaggcaggtggccattgtgttctgcaccccgccctactgcgacaccaacctgacc
gagccaatccgagtgaagatgcagctccgcaggccctcggatcgtgaggtcagcgagcca
atggacttccagttcctgccctccgacccagatgaatatagactaatggagaagcgaaaa
cggacagagggaatgttacagaatctgaagctggggtccctgatgtcggggaccatgcca
gcagagacgaggccgttcaacattgccaggagaacagtcaccgccaagccagcagctagc
cagcctgtgatgaacccagtggtgccccctagtgccttctctgtgaagccccagccctac
tacaacggcccccagccaggcaagttgtttcaaacccagcccaaatcagaagcctcctcc
accacagccgagacctggaagttcctcaacagcctgactctggactcccagcccaaagcc
acccccgtggccagcttcaccaccaacccccaggcctctgcagccacagccgcctcctcc
caggcctttcccaccgtaaacctgttggacttcaacggattcgctttccacaactttgct
tgtccccaggagccggtgagtgcagcccctacaccagagcccacctctaccttcggggtc
caaggctcccagttcaaggtggatgaggagctacctgaattccccagcttttctgaggca
caagcgccagggactctagatagtataaacattgaagaattccaggctatgctgggccag
agttgtctggctggagaagggccaaagagcagtgaggcgtcagcccctcaggcaccctgc
cacttaccctccaccaacactgtggccaacaacaacgcggcccagaaccaagcagaccca
gccaaccaccacaccggatgtggcggcagcacttggatgaactaccccaacagcattgtc
agcctgctccacaacgagggcatgatggacagttcccccagcaacgccagccagccggcc
gcccttgacgacctggacgtcttaagctccatggacgaagaccgtctcatgtccatcctg
aacagtggcaaccaatacagttttgtgcccggacatcagacctaa
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