Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139416231
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Entry
139416231 CDS
T10872
Name
(RefSeq) plexin-D1-like
KO
K06822
plexin D
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
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Other DBs
NCBI-GeneID:
139416231
NCBI-ProteinID:
XP_071020753
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Position
9:complement(36040313..36149251)
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AA seq
1900 aa
AA seq
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MPPSEKIVVLIFGVLVLESSWNAQHSPWLASALQIQQAFASPNQTNNFVVDEVSRKVYLA
TVNMVYQLNRTLSVEVEKRTGPVEDNLLCHAPQLPQAPCEHPKSLTDNFNKLLELDREQG
VLVVCGSVYQGFCELRKMENISQIAVEFPPQGEKTVFPSMLNIAANHPNASTVGLIFRSH
GGNTRLLVGATYTGVGTTFFPKNHSKEDLRFENTPEIAIRSLNINDLSRLFTYDINPSED
NVFKIKQEVKQKNKLNFVHAFIQKTYSYIAINNDANMGHKESQPNSILARICLDTENPRK
STSESRKLTESFIQMPLQCGYNGNIYNRLVSVHPAEIHSGTGEGLESYLFGVFTKSDRKS
ALCAFRFSDIEEEIRQGRRNCSNSPSSEVQVLDSVIQGSGAACVHKGNLVLQPEQLDCGA
AHLQHPLALQRPLRATPLFESLGLSSVAVDDVHHHTVVFLGTSTGRLRKLTLLKNLTVAN
QWSLKLPAGESVHHIMTFDPIDRNYLYLMTSHHLLRVKVAACSQYRTCRDCLGAGDAHCG
WCTLESRCSIQRECAWGPLARSWIGMGEGPQQCPSMTLTPPEISLSTDIKDVGILINGSV
PDLVGSRVECDYGLGVATAATVHLDYGPAQIQTCPLLPRERYPNIPPGRDHLTVPVAIKV
NGTSVVSGSFVIYDCERTGAIHTKTACISCLSTRWRCYWDQDSHSCLSSKDDSKHSLLEN
ATFCPSLVAENVAPSPSGMTQNFTLFLDNVVQGEELECDFGNEQRYDSRWLEDSSGVKCS
GVTLTTVEKSQVFQLSLRRKGHLDKYIDSPKPVTVEVYNCGVGNGDCSQCWGRENLGHLC
GWCDNSCRPRNDCQYMNSQCPDPEITKISPQSGPLEGGTLLTVQGRNMGRRAEVVEVSIG
MFPCTIIPDQYTVSVELVCVTGQAVDPTKNFVRITVNQKAMAVSKEAFSYLVPKLLSMEP
RKGSRSGGTRVTIKGEHLDTGSQIRVKVNGTQECTILTLTEDTIECTMPAALHTHTEAVS
VCVEFEYIPCQRSELLTQYIYEKNPSISYIKPRQSYLSGGRTITVTGQGFDLVQSVTMEV
LDIGQAACKVQPPSMITCSSPTSSQSQQATVEFFLNGVLYTGDSPIFYGPGQEEEEEPHG
GHFLLEYVEDPQFFTANKEKLIKHHPGEPLTLIINKGPSNLELAPEEYSVMIGSYPCDIS
FHNDQLFHCSINGSLGSSEGELPVTVQVGNFQRIIAKVQLGGSELAIVVSIVVCCVLLLL
CTVALVVYCTKSRRAERYWQKTLLQMEEMESQIREEIRKGFAELQTDMTDLTKELNSSQG
IPFLEYKQFVTRTFFPKMCSDYERSLVQPVYENNALGPRALPETHPLLQDWQPSNTAKPN
MEEGITLFSTLLNNKHFLVTFVHALEQQKDFAVRDRCSLASLLTIALHGKLEYYTSIMKD
LLVDLIDASAAKNPKLMLRRTESVVEKMLTNWMSICMYSYLKETVGEPFFLLLCAIKQQI
NKGSIDAITGKARYTLNEEWLLRENIEAKPQNINVSFQGCGMDSLAVRVMNTDTICQVKD
KILDAFYKNLPFSQWPQAEDVDLEWFASGSNSRILQDLDNTSVMEDGRKKLNTVTHYQIP
EGASFAMSMKDKRDNTLGRAKDLDTEKYVHLVLPHDELFENKKSHRQSHRKKVLPEIYLT
RLLSTKGTLQKFLDDLFQAILSIPAERPPLAIKYFFDFLEEQADKRGITDPDTLHIWKTN
SLPLRFWVNILKNPQFVFDIDKTDHMDACLSVIAQAFIDACSISDLQLGKDSPTNKLLYA
KEIPEYKKRVQCYYKQIQEMAPLSEQEMNAHLAEESRKYRNEFNTNLALTEIYKYAKKYR
NQVVSALESNPTAKRTQLHHKFEQVIALVEDNIYECSSEA
NT seq
5703 nt
NT seq
+upstream
nt +downstream
nt
atgcctccttcggagaagatagttgttctgattttcggcgttctggtgctggaatcgtcc
tggaatgcacaacacagcccatggcttgccagcgcgctacagatccaacaggcgttcgcc
tctccaaaccagaccaataactttgtggtggatgaggtgagtagaaaagtctacctggct
acggtaaacatggtctaccagcttaacaggaccctgagcgtggaggtggagaagagaaca
gggccggtggaggacaacctgctgtgccatgcgccgcagcttccccaagcgccctgcgag
caccccaaatctctcactgacaacttcaacaagctgctcgagctggaccgggagcagggg
gtgctggtggtatgcggctcggtgtaccagggcttctgtgagctcaggaagatggaaaat
atatctcagatagcggtggagtttccccctcagggcgagaagaccgtgttccccagcatg
ctgaatatcgccgcgaaccaccccaacgcttccaccgtggggctcatcttcaggagccat
ggggggaacacccgactcctcgtcggggccacttacaccggcgtcgggaccacgtttttc
cccaagaaccacagcaaggaggacctgcgcttcgagaacacacccgaaatcgccattcgg
tccctgaacatcaatgatttatcgaggctgttcacctatgacatcaacccgtccgaggat
aacgtcttcaagatcaaacaggaggtgaagcagaagaataaactaaactttgtccatgcc
ttcattcagaagacctattcttatattgctatcaacaacgacgcgaatatgggccacaag
gagagccagccgaacagcatcctggccaggatatgcctggacaccgagaaccccagaaaa
tccacctcagagagccgtaaactcactgagtccttcatccagatgccgctccagtgtgga
tataacgggaacatctacaaccgtctcgtctccgttcaccccgcggagatccactcgggg
accggagaggggctggagtcgtacctgttcggggtgttcaccaaatcagatagaaagtct
gccctgtgtgcgtttcggttctcagacatcgaggaagagatccgtcagggccggaggaac
tgctccaactcccccagcagcgaggtgcaggtgctggacagcgtcatccagggctcgggc
gcagcgtgcgtacacaaagggaatctggtgctgcaaccggaacagctggactgtggagcg
gcccacctgcagcacccactggccctacaaaggcccttgagggccacacccctgtttgag
tctctgggcctcagctctgttgccgtggacgacgtacatcaccacactgtggtgtttctg
ggcaccagcaccggacgactgcgcaagctgaccctcctgaagaacctgaccgtggccaat
cagtggtctctgaagctaccagccggcgaatcagtgcaccacattatgacctttgacccc
atagacaggaactacctctaccttatgacttctcaccatctcctgagggtaaaggtagca
gcatgtagccagtacagaacatgccgtgactgtctgggggccggcgatgcacactgtggc
tggtgcacactggagagcaggtgttccatccagagggagtgtgcctgggggcctctggcg
cgctcctggatcgggatgggcgaaggtccccagcagtgcccctccatgaccctcaccccc
ccagagatcagcctgtccactgacatcaaggatgtggggattctgataaacgggagtgtc
cctgatctggttggttcgcgggtggaatgtgactatggattgggtgttgccacggcagcc
acggtgcacctggactacggcccagcccagattcagacctgccccctactacctcgggag
aggtaccccaacatcccccctggcagagatcacttgactgttcccgtggcgataaaggtg
aacggcacatccgtggtttccgggagcttcgtcatctatgattgcgagaggacaggagcg
atacacacgaagactgcatgtatcagctgtctgagcaccaggtggaggtgttactgggac
caggacagccactcttgcctctcctctaaagacgactccaaacatagcctgctagagaat
gctactttctgtccaagtcttgtggcagagaatgttgcaccttcgccctcggggatgacc
cagaacttcaccctgttcctagacaacgtggtacagggggaggagctagagtgtgacttt
gggaacgagcagcggtatgattcccgatggctggaggacagctcaggggtcaagtgcagt
ggagtgacgctaaccactgtggagaagagtcaggtgtttcagctcagtctgcgtagaaag
ggacacctggacaaatacatcgacagccctaaacccgtgacagtggaggtgtataactgt
ggggtgggcaatggggactgttctcagtgttggggacgtgagaacctgggacatctgtgt
ggctggtgtgacaacagctgtagacccaggaatgactgccagtatatgaatagccagtgt
cctgaccccgagatcaccaagatctccccccagagtgggccgttggagggaggtaccctg
ctcacggtgcagggtaggaacatggggcgcagggctgaggtagtggaggtctccatcggg
atgttcccatgtacaatcattcctgaccaatacactgtctctgtggagctggtgtgtgtt
actgggcaggccgttgatcccacaaagaattttgtcagaattactgtgaaccaaaaagca
atggcggtgtccaaagaggccttctcatacttggtccccaagctgctatccatggagcct
agaaagggctctcgttctgggggaaccagggttaccatcaagggggagcacctggacact
ggctcccagatcagagtcaaggtcaatggtacccaggaatgcaccatcctcacgctaact
gaagacaccattgagtgcaccatgcctgcggccctgcacacacacactgaggcggtgtcg
gtgtgtgtggagtttgaatacataccctgtcagcgctctgagctcctcacccagtacatt
tacgagaagaaccccagcatcagctacatcaaacccagacagagctacctcagtggcggt
cggaccatcacagtaacggggcagggttttgacctggttcagagcgtcactatggaggtg
ctagacatcgggcaggcggcctgtaaggtgcagcctccctccatgattacatgctcctcc
cccacatctagccaatctcagcaggccacggtagagttcttcctgaatggagtcctctac
acgggagatagcccgatcttttacggcccaggccaggaggaagaggaggagccacacgga
ggtcatttcctgttggagtacgtggaggaccctcaattcttcaccgccaacaaggagaag
ctgatcaagcaccaccctggggagccactcacactcatcatcaacaaaggaccgagcaat
ctggaactggcgccggaggaatactcagtaatgattggctcctatccctgtgacatcagc
ttccataacgaccagctgttccactgcagcatcaacggctcgctgggctccagtgaagga
gaactgcctgtcaccgtgcaggtgggtaacttccagaggatcatagccaaggtgcagctg
ggtggtagtgagctggccattgtggtgtccatcgtggtgtgctgcgtcctgttgctgctg
tgcactgtggctctggtggtatactgtactaagagccggagggcggagcgctactggcag
aagacactgctgcagatggaggagatggagtcccagatcagagaggagatccgcaaaggc
tttgcagagctgcagacagatatgacagacctgactaaggagctgaacagtagccaggga
atccccttcctggagtacaaacagtttgtcacacgcactttcttccccaagatgtgttca
gactatgagaggagtctggtccagcccgtctatgagaacaacgccctcggtccacgagcc
ctccctgagacacacccccttctgcaggactggcagccctctaacacagccaagcctaac
atggaagagggcataactctcttctccactcttctcaacaacaaacacttcctggttacc
ttcgtccacgcgctggagcaacagaaggactttgccgtacgcgacaggtgtagcctggca
tccttgctcactatcgccctccatggtaaactggagtactacaccagcattatgaaggat
ctgctggtggacctgatcgacgcctcggccgccaagaaccccaagctgatgctgcgacgc
acagagtctgtggtggagaagatgctcaccaactggatgtctatctgcatgtacagctac
ctcaaggagacagtgggcgagcccttcttcctgctactgtgtgccatcaagcagcagatc
aacaagggttctatagacgccatcacagggaaggcccggtacaccctcaacgaggagtgg
ctgctcagagagaacatcgaggccaagccacagaacatcaacgtctcgttccagggctgt
gggatggactctctggccgtgagggtgatgaacacagacaccatctgccaggtgaaggat
aagattctagatgccttctataagaacctgcccttctcgcagtggccccaggcagaggac
gtagacctggaatggtttgcgtctggtagtaacagcaggatcctccaggacctggataac
acttcagtgatggaggatggcaggaagaaactcaacacagtcacgcattaccagatccca
gagggggcgtcgttcgccatgagcatgaaagacaagagagacaacaccctggggagagcc
aaagacttggacacagagaaatatgtccatttggtcctgcctcatgatgagctgtttgag
aataagaagtcccacagacagagtcaccgtaagaaggtcctccctgagatctacctgaca
cgcctcctctccaccaagggaacattgcagaagttcctggacgaccttttccaggccatc
ctcagtattcccgcagagcgtcctccactggccatcaaatacttctttgacttcctggag
gagcaggcagacaagaggggcatcaccgaccccgacaccctgcacatctggaaaaccaac
agtttacctttgcgtttctgggtgaacatcctgaagaaccctcagtttgtgtttgacatt
gataagacggatcacatggatgcatgtctgtctgtcatcgcccaggccttcatagacgcc
tgctccatttcagacctgcagctgggcaaggactctcccaccaacaagctgctgtatgcc
aaggagatcccagagtacaagaagagggtgcagtgctactacaagcagatccaggagatg
gcgccactgagcgagcaggagatgaacgcccacttggccgaggagtcacggaaatacaga
aacgagttcaataccaacctggccttgacggagatctacaaatacgccaagaaatacaga
aaccaggtggtgagtgctcttgagtccaaccccacagcgaagcgtactcagctgcaccac
aagtttgagcaggtcattgctctggtggaggacaacatctatgagtgcagcagtgaggcc
tga
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