Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139416376
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Entry
139416376 CDS
T10872
Name
(RefSeq) polyhomeotic-like protein 2 isoform X1
KO
K11457
polyhomeotic-like protein 2
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
139416376
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ocla03036
]
139416376
Chromosome and associated proteins [BR:
ocla03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
139416376
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Gene cluster
GFIT
Motif
Pfam:
PHC2_SAM_assoc
SAM_1
zf-FCS_1
SAM_2
Motif
Other DBs
NCBI-GeneID:
139416376
NCBI-ProteinID:
XP_071021023
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Position
9:complement(44312137..44360092)
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AA seq
840 aa
AA seq
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MQNEAPGPAADSASSISTTPSVTTSLVTTSSTGRPTLPHISVYAGIPGRQTAQVIQQALH
RQPSTAAQYLQQMYAAQQQHLMLQTAALQQQQQLSNTQLQRLAGVQQVHATIVAGRQSSN
QIWTSSHQTCSTQPTVNPATPPAAAQIISRVQSVSSTPTCIPQQAVLLGNASSLVLTASQ
AQMYLRAQMLIFTPTAAVATVQSAASSQSATNQQSASAQVQNLAICSQQGAHSSSQLQGL
HLKQMSGGAQVSLAGQLRDPTQGPQGAQLGSLAAPSEGGQKGEGHLVTMSRSVMAVSSHP
LISPAYAQIQTHQFLQQQKQQQFVFQQQRHQTQQLSLRGQAPVLHSASIHSHSQAQMLQA
LAIQPPPKEGPVPVLPKPFVSANVPSQQATIFHSTVSPQILTHNGPSPVVTQTQAAPLPN
TKLVQMAAVDLQIQPTALTPASQLVQDSAGKELPTSEVVTENSSTPLIQQPTAPPILEVI
TIEQCPSDPSNPTTPTGAGKGDAEWLNAQPGAGSLPVMTSGNGNNAPMVTGSTPQNGESK
LPQAIVKPQILTHFIEGFVIQEGAEPFPVERPLSLLIENLKKHKQQTHSDSEKTTTSSNS
TTDSEMEDLSQQELKQQEEPTLTCELCGRVDFAYNFKRSKRFCSTVCAKRYNVGCTKRMG
LFPNRQTTMEKLKKQRTSNGNHQKSSSETKKLTPITGQQPGGGSVTSSHPSHPGHREFSQ
CLDMSSYEGPPSPPLSAASSSAPRSQAGRGAEHMEGGGQELPLLSQHFQPRDPAKWNVEE
VYEFICSLPGCLAIAEEFRSQEIDGQSLLLLKEDHLMGTMNIKLGPALKLFAEISMLRDS
NT seq
2523 nt
NT seq
+upstream
nt +downstream
nt
atgcagaatgaggccccgggcccggcagccgacagtgccagcagcatcagtacaactccc
agtgtcaccactagcctggtcactactagcagcactgggaggccaaccctgccccacatc
tctgtctacgctgggatcccaggtagacagactgctcaggtgatccaacaggcgctccac
agacaacccagcacagcagcccagtacctgcagcagatgtatgcagcccagcagcagcac
ctcatgcttcagacagcagccctccaacagcagcagcaactgagcaacactcagctccag
aggcttgccggtgtgcaacaggtccatgctaccatagtggcaggaagacagagctccaac
cagatttggacctcctctcaccagacatgttccacacagcccactgtaaacccggccacg
cctccagcagcggcccagataatcagcagagtccagagtgttagctccactcccacctgt
atcccccagcaggctgtgctcctaggcaacgcctccagcctcgtcctcaccgctagccaa
gctcagatgtatctgcgggctcagatgctcatcttcaccccaactgcagctgttgccact
gtccaatcagcagcctcatcacagtctgccaccaaccaacaatctgctagtgcacaggtg
cagaaccttgccatctgtagtcagcagggggcccactcctcctctcagctccagggcctt
catctcaaacagatgtctggaggggcccaagtctccctggctggtcagctcagggatcca
acccaggggccgcagggagcacaactggggtccctggcggccccatcagagggggggcag
aaaggtgagggccacttggtgaccatgagccgcagtgtgatggccgtcagcagtcacccc
ctcatcagcccagcgtacgcacaaatccagacgcaccagtttctgcagcagcaaaaacag
cagcagtttgtgttccagcagcagcgacaccagacccagcagctttctctgaggggccag
gccccagtgctacactcagcctccatccacagtcactctcaggcccagatgctacaggcc
ctggctatccagcccccgcccaaggagggccccgtccctgtacttcccaaaccatttgtc
tctgccaatgttcctagccagcaggccaccatctttcactctaccgtcagtccccagatt
cttacccacaacgggccatcccctgtggtcacccagacccaggctgctccgctgcccaac
accaagttagtgcagatggctgcagtagacctccagatccagccaactgctcttacacca
gcctctcagctggttcaggatagtgctggcaaggagctgcccacgtctgaggtagtcacg
gagaacagctccactcccctcatacagcagccaacagcccctcctattcttgaggtcatc
actattgagcaatgcccatcggatcccagcaaccccaccacacccactggagcaggtaag
ggagacgctgagtggctgaatgcgcaaccaggtgcaggctcacttccagtcatgacctca
gggaatgggaacaatgcgcccatggtgacaggcagtaccccacagaatggcgagagcaaa
ctgcctcaagccatagtgaaaccccagatcctcacccactttattgagggatttgtgatc
caggagggagcagagcctttccctgtggaacgcccgttgtcgttgctgatcgagaacctg
aagaaacacaaacagcagacgcactctgattctgagaagacgacgacctcctccaacagc
accactgactctgagatggaggacctatcacagcaagagctgaagcagcaagaggagccc
accctgacgtgtgagctgtgtggcagagtggactttgcctacaacttcaagagatccaag
aggttctgctccacagtgtgtgccaaacggtacaatgtggggtgtacaaagcgaatgggc
ctctttccaaatcgacaaaccacgatggagaaactgaagaagcagagaacatccaatggg
aaccaccagaaatcaagctccgagaccaaaaaactgactcccattactgggcaacaacct
gggggtggatcggtgacgtccagccacccctctcaccctggtcacagagagttcagccag
tgtttagacatgtccagctacgagggtccgccatcacccccactgtctgctgccagctct
agtgctcccaggtcccaggcgggcagaggggcagagcacatggagggcggtggacaagag
ctgcccctcctttcccagcacttccagcccagagacccggccaagtggaacgtggaggag
gtctacgagttcatctgctccctgccaggatgcctggcgatagccgaggagttccgctcg
caggagatcgacggccagtccttgctgctgctgaaagaggaccacctcatgggcaccatg
aacatcaaactggggcctgcgctcaagctctttgccgagatcagtatgctgagagactcg
taa
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