Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139416602
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Entry
139416602 CDS
T10872
Name
(RefSeq) vitamin D3 receptor A isoform X1
KO
K08539
vitamin D3 receptor
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ocla01009
]
139416602
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocla03000
]
139416602
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ocla03310
]
139416602
Protein phosphatases and associated proteins [BR:
ocla01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
139416602
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
139416602
Nuclear receptors [BR:
ocla03310
]
1. Thyroid hormone like
1I. Vitamin D3 like receptor
139416602
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
PCF11_charged
Motif
Other DBs
NCBI-GeneID:
139416602
NCBI-ProteinID:
XP_071021566
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Position
9:complement(57130339..57218885)
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AA seq
423 aa
AA seq
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METMAVSTSVVGPDEFDRNVPRICGVCGDKATGFHFNAMTCEGCKGFFRRSMKRKASFTC
PFNGSCTITKDNRRHCQACRLKRCVDIGMMKEFILTDEEVQRKKDLIQKRKEEEAAREAL
RPRLNDEQSQVIASLVEAHHKTYDDSYSDFSRFRPPVREGPVTRSASRAASLHSLSDASS
DSFNHSPESVDTKLMNFSSLLMMYQDSAGSPDSSEDDGSKLSMLPHLADLVSYSIQKVIG
FAKMIPGFRGLTAEDQIALLKSSAIEIIMLRSNQSFNLEDMSWSCGGGPDFKYCVNDVTK
AGHTLDLLEPLVKFQVGLKKLKLHEEEHVLLMAICLLSPDRPGVQDHAKIEVLQDRLSEV
LQAYIRVNHPGGRLLYARMIQKLADLRSLNEEHSKQYRSLSFQPEHSMQLTPLVLEVFGS
EVS
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atggagaccatggctgtgagcacgtctgtggtggggcctgatgagtttgaccgcaacgtg
ccgcggatctgtggcgtctgtggagacaaggccacaggcttccacttcaacgccatgacc
tgtgagggctgcaaaggcttcttcagacgcagcatgaagcgtaaggccagtttcacctgc
cccttcaacggcagctgcaccatcaccaaggacaaccggcggcactgccaggcctgccgg
ctcaaacgctgcgtggacatcggcatgatgaaggagttcatcctgacagatgaggaggtg
cagaggaagaaggacctgatccagaagaggaaggaggaagaggcggcgcgggaggccttg
agacctaggctgaacgacgagcaaagccaggtcatcgcctcattggtggaggcccaccac
aagacctatgatgactcctactctgacttctcacgcttcaggcccccagtgcgagagggc
ccagtaacacgcagtgccagtcgtgcagcctcccttcactctctgtcagatgcctcctca
gactccttcaaccactcaccagagtctgtggacaccaagctgatgaacttcagcagtctg
ttgatgatgtaccaggacagtgcaggcagcccagactccagtgaggacgatggctccaag
ctctctatgctgccccacctggctgacctggtcagctacagcatccagaaggtcatcggc
tttgctaagatgattcctggcttcagagggctgactgctgaggaccagatcgccctgctg
aaatccagtgccatcgagatcatcatgctgcgttccaaccagtccttcaacctagaggac
atgtcctggagctgtggtggtggtcctgacttcaagtactgcgtcaacgacgtcaccaag
gcgggtcacactctggacctgttggagccactggtgaagttccaggtgggcctgaagaaa
ctcaagctccatgaggaggaacacgtgctgctcatggcaatctgcctgctgtctccagat
cgacctggggtgcaggatcacgctaagatcgaggttctccaggaccgtctgtcagaggtg
ctccaggcctacatcagagtgaaccacccaggaggacggctgctgtacgccaggatgatc
cagaagctggccgacctgcgcagcctcaacgaagagcactccaagcagtaccgctcgctg
tccttccagccagagcacagcatgcagctcaccccgctggtgctggaggtgtttgggagc
gaggtgtcatag
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