Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139416834
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Entry
139416834 CDS
T10872
Name
(RefSeq) beta-1,4 N-acetylgalactosaminyltransferase 1-like isoform X1
KO
K00725
(N-Acetylneuraminyl)-galactosylglucosylceramide N-acetylgalactosaminyltransferase [EC:
2.4.1.92
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla00600
Sphingolipid metabolism
ocla00604
Glycosphingolipid biosynthesis - ganglio series
ocla01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
139416834
09107 Glycan biosynthesis and metabolism
00604 Glycosphingolipid biosynthesis - ganglio series
139416834
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ocla01003
]
139416834
Enzymes [BR:
ocla01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.92 (N-acetylneuraminyl)-galactosylglucosylceramide N-acetylgalactosaminyltransferase
139416834
Glycosyltransferases [BR:
ocla01003
]
Glycan extension
Glycolipid
139416834
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glycos_transf_2
FKRP_N
Motif
Other DBs
NCBI-GeneID:
139416834
NCBI-ProteinID:
XP_071022032
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All DBs
Position
9:complement(68088566..68180945)
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AA seq
531 aa
AA seq
DB search
MMRCLVQKKTYLVILSPLLLFALLRYWTRRATTTVDVGPGQSYKAQNVLKERLQNVQNSY
DNIPYVLKESVAGRLALNVCVCEADKKPAIDLPFAQVLFPRVWAQDDFHTAFQEAELAKV
KSRRQQEYNSFQQRYQTPADLLVIAEANSPLQYPTQGVEVRPLKTIVIPGLGLKEKHRQL
HTVNLTATLGTFDVLATVDGVSIRGQGVMHMTLSSRLLSTLNRQLQFVTYTNTLFHPRTA
DTVQFETDGHQSVFTIKVGHAVIPKLYHSGYTGEYNISSLVTIATKTFLRYDKLQDLIDS
IREFYPTVAIVIADDNEHPQPVMGPYIEHYIMPFGKGWFAGRNLAVSQVTTKYVLWVDDD
FLFTSNTRLENMVEILEKTTLDMVGGAVREATGYTATYRHTISVEEGGEEGDCIHIRNGY
HHVIEGFPNCVLADAVINFFMGRTDKMQQVGFDPRLNRVAHLEFFIDGLGILHIASCDDI
IINHASKIKLPWGKSHSEKAYAKFRYSSSDAVQIKNALFYFKNRLKCMSSN
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgatgcgctgcctcgttcagaagaaaacatacctcgtcattttatctccactgctactg
ttcgccctcctccgctactggactcgaagggccaccaccactgttgacgtgggaccaggt
cagagctacaaggcacagaacgttctgaaggagaggctacaaaatgtccagaatagttat
gacaatatcccatatgtcctgaaggaaagtgtggcagggcgtctggcactgaacgtgtgt
gtgtgtgaggcagataagaagcctgccatcgacctgccttttgcccaagtgctgttcccc
cgtgtctgggctcaggatgacttccacacagccttccaggaggcagagctggctaaggtg
aaaagtcgcaggcagcaggagtacaacagcttccagcagaggtaccagactcccgcagac
ctccttgttatagcagaagccaacagtcccctacagtaccctacccagggggtggaggtt
cgccctctcaagactatcgttatccctgggttgggtctgaaagaaaagcatagacaactt
catacagtgaatctgactgctaccctggggacatttgatgtgttagccaccgtagacggg
gtctccattagaggacagggagtgatgcacatgactttgtccagtagactcctctccact
ctgaacagacagctacagtttgtcacctacaccaacaccttgttccaccctaggacggct
gacacagtgcagtttgagactgatggacaccagtccgtttttaccataaaggttggacat
gctgttattcccaagctctatcactcaggttacactggagaatacaacataagctcactt
gtcaccatagctaccaagacatttctgcgttatgacaaactgcaggatctgattgacagc
atacgggagttctatcccactgtcgccatagtgatagcagatgacaacgagcacccccag
ccagtgatgggtccatacattgaacattacattatgccgtttgggaagggttggtttgca
gggaggaatctggctgtctctcaggtgaccaccaagtatgtgctgtgggtggatgatgat
ttcctcttcacctccaacaccaggctggagaatatggtggagatcctggagaagaccacc
ctggacatggtgggtggtgctgtgagagaagctacaggctacactgctacttaccgccac
accatctcagtggaggaagggggtgaggagggggactgtatacacatcagaaatggatac
catcatgtcattgagggctttcctaactgtgtcctagctgacgctgttatcaacttcttc
atggggaggacagacaagatgcagcaagtgggattcgatcctcgtctgaaccgtgtggct
catctagagttcttcatcgacgggcttgggatcctccacatagcttcctgtgatgacatc
atcataaaccatgcatctaagatcaagttgccatggggcaagtcgcacagtgagaaggca
tacgccaagttccgctactcctcatcggatgctgtccaaatcaaaaatgcccttttttac
ttcaagaacagactcaaatgcatgtctagtaactga
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