Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139417304
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Entry
139417304 CDS
T10872
Name
(RefSeq) transcription factor E2F1-like
KO
K17454
transcription factor E2F1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04110
Cell cycle
ocla04137
Mitophagy - animal
ocla04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
139417304
09143 Cell growth and death
04110 Cell cycle
139417304
04218 Cellular senescence
139417304
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocla03000
]
139417304
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Helix-turn-helix
Fork head/winged helix cell cycle-controlling factors, E2F
139417304
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Gene cluster
GFIT
Motif
Pfam:
E2F_CC-MB
WHD_E2F_TDP
Motif
Other DBs
NCBI-GeneID:
139417304
NCBI-ProteinID:
XP_071022670
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Position
9:57307142..57313990
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AA seq
444 aa
AA seq
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MSEALVSGQTSEDLLADFESLLNAGSIDLSENHQIVIISTPSNVGLNSAVPSNTGEILLF
ATPQGPADVVQDQRRPTLGRPPVKRKLDLDSDHQYVSTSRPPSLGRAPTSTPAPPRVPKP
STEKSRYDTSLNLTTKRFLDLLAQSPDGVVDLNWASQVLEVQKRRIYDITNVLEGIQLIS
KKSKNNIQWLGNRIDGASVSRYQDLQKEVSDLTQAEEKLDELITKCNLQLRLLTEDTQNK
KLGYLMCQDLRKSFDSPDQLVMVIRAPPETQMQVSEPSEGYQVSLKSTQGPIDVFLCPED
ISGVCSPVTGISPSKATYQIMPQPAEQPQCSSTQEITLSTAASQQNSSPLPLFCEAGAVL
ECYPFTNLGVLSELDLSPLSSSDFLSGEGLGNPLDGFINLSPPQSHSYHFGLEEHEGITE
LFDSDFGDFTPLELGWRETPTEQE
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaggcactcgtatcaggtcagacgtcggaggatcttttggcagactttgagtct
cttttgaatgctgggagtattgacttatcagagaaccaccagatagtcataatttctacc
cccagcaatgtgggcttaaactcagctgtacccagcaacactggagagatcctcctgttc
gctaccccccaaggccctgcggatgtggtccaggaccagcgacggccaactctgggacga
cctccggtgaagaggaagctggacttggacagtgatcaccagtatgtcagcacctctcgc
ccaccttctcttgggagggccccaacgtccacaccagcaccacccagagttccaaagcct
tcgacagagaagtctcgctatgacacatctttgaacctgaccaccaagcgcttcttagac
ctgctagcccagtctcctgacggggtggtggacctcaactgggcctcacaggtcctggaa
gtgcagaagagacgcatctatgacatcaccaatgtcttggagggtatccagctcatctcc
aagaaatcaaagaacaacatacaatggctggggaaccgcattgatggagcgtctgtttcc
cgttaccaggacctacagaaagaggtctctgatttgacacaggctgaggagaaactggat
gagcttattaccaagtgtaacctccagctcagactcctcactgaggatacccagaacaag
aagctgggttatttgatgtgccaggatctacggaagtcttttgactctcctgaccagctg
gtgatggtcatcagagcccctccagagacccagatgcaagtgtcagagcccagtgagggc
tatcaggtctccctgaagagcacccagggtcccattgatgtcttcctgtgtccagaggac
atttctggtgtctgcagcccagtgacaggcatcagcccttctaaagccacataccagata
atgccccagcctgcagaacaaccacagtgcagttccacacaggaaattacattgtcaaca
gctgcgtcccaacagaactcctctccactgccattgttttgtgaagcgggagcagtcctg
gaatgttacccgttcactaacttgggagtgctgtcagaattggacctttcacccttgtca
tcctctgacttcctcagtggggagggccttggtaacccactggatgggttcatcaacctg
tcccctccacaaagccacagctaccactttggcctagaggagcatgagggcatcactgaa
ctgtttgactctgactttggagacttcaccccactagagttggggtggagagaaacaccc
acagaacaagaatga
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