Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139418038
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Entry
139418038 CDS
T10872
Name
(RefSeq) non-selective voltage-gated ion channel VDAC1
KO
K05862
voltage-dependent anion channel protein 1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04020
Calcium signaling pathway
ocla04217
Necroptosis
ocla04218
Cellular senescence
ocla04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
139418038
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
139418038
04218 Cellular senescence
139418038
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
139418038
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
ocla03029
]
139418038
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ocla04040
]
139418038
Mitochondrial biogenesis [BR:
ocla03029
]
Mitochondrial protein import machinery
Outer membrane
Porin
139418038
Ion channels [BR:
ocla04040
]
Chloride channels
Maxi chloride channel (VDAC)
139418038
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Porin_3
Motif
Other DBs
NCBI-GeneID:
139418038
NCBI-ProteinID:
XP_071023240
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All DBs
Position
10:complement(14530121..14548256)
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AA seq
283 aa
AA seq
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MAVPPTYVDLGKSAKDVFTKGYGFGLIKLDLKTKSENGLEFTSTGSANTETSKVAGTLET
KYKWAEHGLTFTEKWNTDNTLGTEITLEDQLAKGLKLTFDSSFSPNTGKKSGKIKTGYKR
EHLNLGCDVDYDINGTAVHGVAVVGYEGWLAGYQVTFEAGKNRVTQSNFAVGYKTDEFQL
HTNVNDGTEFGGSIYQKVNDQLETAVNLAWTAGNSNTRFGIAAKYQIDADAAFSAKVNNS
SLVGLGYTQTLKPGIKLTLSALLDGKNINAGGHKLGLGLEFEA
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atggccgttcctccaacctatgttgaccttggcaagtcagccaaggatgtcttcaccaag
ggatacggttttggtctcatcaagctggacttgaaaaccaagtcagagaatggactggag
ttcaccagcacaggatctgccaacacggagaccagcaaagtggctggcaccctggagacc
aagtacaagtgggcggagcatgggctgaccttcactgagaagtggaacactgacaacact
ctgggcacagagatcactcttgaggaccagttggccaaagggcttaaattgacgtttgat
tcctccttctcgccaaacactggcaagaagagtggtaagatcaagaccggctataagagg
gagcacctcaacctgggctgtgatgtggactatgacatcaacgggacggcagtgcacggc
gtggcggtggtgggctatgagggctggctggccggctaccaggtgaccttcgaggccggg
aagaacagggtcacccagagcaactttgccgtgggctacaagaccgacgagttccagctc
cacacgaatgtaaatgatggcacagagtttggtgggtccatctaccagaaggtgaatgac
cagctggagacagcagttaacctggcctggaccgctggtaacagcaacactcgctttggc
atcgcagccaagtaccagatcgatgccgacgcagccttctcggccaaagtgaacaattct
agtcttgttggcctgggatacactcagactctgaagcctggaattaagctgaccctctct
gctctcctggatgggaaaaatattaacgctggtgggcacaagctcggtcttggactcgag
tttgaggcataa
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