Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139418205
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Entry
139418205 CDS
T10872
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM37-like isoform X1
KO
K10608
tripartite motif-containing protein 37 [EC:
2.3.2.27
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
139418205
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ocla04121
]
139418205
Enzymes [BR:
ocla01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
139418205
Ubiquitin system [BR:
ocla04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
139418205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MATH_2
zf-B_box
MATH
zf-C3HC4_3
HTH_1
zf-C3HC4_2
HlyD_2
MRFAP1
PIN_8
FUSC
Motif
Other DBs
NCBI-GeneID:
139418205
NCBI-ProteinID:
XP_071023578
LinkDB
All DBs
Position
10:complement(26848147..26890308)
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AA seq
982 aa
AA seq
DB search
MDEQSVESIAEVFRCFICMEKLRDARLCPHCSKLCCFSCIRRWLTEQRAQCPHCRAPLQL
RELVNCRWAEEVTQQLDTLQLCNLSKHEENDKDKCENHHEKLSVFCWTCKKCICHQCALW
GGMHGGHTFKPLAEIYEQHVSKVNEEVAKLRRRLMELISLVQEVERNVEAVRGAKDERVR
EIRNAVEMMIARLDNQLKNKLITLMGQKTSLTQETELLESLLQEVEHQLRSCSKSELISK
SPEILLMFQQVHRKPMQSFVTTPVPPDFTSELVPAYDSSTFVLANFSTLRQRADPVYSPP
LQISGICWRLKVYPDGNGVVRGNYLSVFLELSAGLPETSKYEYRVEMVHQASSDPTKNII
REFASDFEVGECWGYNRFFRLDLLASEGYLNMQTDTLVLRYQVRSPTFFQKCRDQYWYIS
QLESAQSSYIQQINNLKERLAIELFRRQKSRSSSPPDRRLGTSTSERDSRSGKGPVAEDG
CQTTATETKVEEEEEEKTQHDDSNELSDGDLEVDCLTGDEEVNPLDGSSTSGSSTATSNT
EENDIDEETMSGENDVEFSGNLEMEEGELPDDVAGAAGGSNHGARCLRRGGGLSSAGSNN
SLLEIDPVILIQLLDLKEHSNVESLWGLQPRPPASLLHSQVQVHSRKERGERRPQAVRRG
APDSGVLIRLKAQMAEVRSKMTDVKFQLEARGEARVVPSGRATGEQGPSYHADSDLGPSR
KSTELDLMGKGPGASRHCRSGGKKALSPKQEGSRLGLRRATDGVEKESRSQSGEELSSDQ
SLFPRDTPNGSEGALKPHSVHSSPPSLGSSSSCYDSKPCISKHDQEQLYGADLYALGGLN
GISTSTIARPRTQPMGSGLLTDSSLDCDLEETAEVRQAEGPSSRPDESEPYCSNPPLPSP
LPRPSSMEECYCDGSHLVHKQTVVLLPGMSSDSEIDCDTENEDEVVALEAGDCRYDAQAL
PCAGAQLNSDGLCFTTGENTER
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atggatgaacaaagtgttgagagtattgcggaggtgttccgctgtttcatctgtatggag
aagctgagggatgctcggctctgcccccactgctccaaactctgctgcttcagctgcata
cggcgctggttgactgagcagagagcccaatgcccacactgtcgggcaccactgcagctg
cgggagttggtgaactgccgctgggctgaagaggttacccagcagctggacaccctgcag
ctctgcaatctctccaaacacgaggagaatgacaaggacaagtgtgagaaccaccatgag
aaactcagtgtgttctgctggacctgtaagaagtgcatctgccaccaatgtgcactgtgg
ggaggcatgcatggcggccacaccttcaagcctctggctgagatctacgagcagcacgtg
tccaaggtgaacgaggaggtggctaagctccgccgccgcctcatggagctcatcagcttg
gtgcaggaggtggagaggaacgtggaagcagtgcgaggggccaaagacgagcgagtgcga
gagattcgtaatgcagtagagatgatgattgcccgtctcgataaccagctcaaaaacaaa
ctcatcaccctcatgggtcagaagacctccctcacccaagagactgagctactggagtct
ctcctgcaggaggtggaacatcagctgcgctcctgcagtaagagcgagttgatctccaag
agcccagagatcctgctgatgttccagcaggttcaccgcaagcccatgcagtcctttgtc
accactccagtcccccccgacttcaccagtgagctggttcctgcctatgactcaagcact
tttgttctggccaacttcagcaccctgagacagagggcagatcccgtctatagcccccca
ctccagatatctggcatctgctggagactcaaggtttatccagatggcaacggtgtggtg
cgcggcaactatctgtccgttttcttggaactatctgcaggactccctgaaacgtcaaaa
tatgagtaccgtgtggagatggtccatcaggcctccagcgaccccactaagaacatcatc
agggagtttgcatcagactttgaggtgggggagtgctggggctacaatcgcttcttcaga
ctggacctgttggccagcgagggctacctcaacatgcagactgacaccctggtcctcagg
tatcaggtgcgttcgcccaccttcttccagaagtgcagagaccagtactggtacatcagc
cagctggagtcagcccagtccagctacatccagcagatcaacaacctcaaagagaggctg
gccattgagctgttccgtaggcaaaagtctcgcagctcatcccctcctgaccggcgcctg
ggcacctcgacctcggagagagactcccgctcagggaaaggtcccgtggctgaggatggc
tgccagaccactgccactgagaccaaagtggaagaggaggaggaggagaagacccagcac
gatgactccaatgagctgtctgatggggacttggaagtggactgtctgacgggggacgag
gaggtgaaccctctggacggtagcagcacctcgggcagctccacggcaacgagcaacaca
gaggagaacgacatcgacgaggagaccatgtctggggagaatgatgtggagttcagtggg
aacctggagatggaggagggagaactgcctgacgatgtggcaggggcagcaggaggctct
aaccatggggccaggtgtctgaggcgtggtggaggtctctcctccgctggcagcaacaac
agtctgctggagattgacccagtcatcctcatccagctgctggacctcaaggaacacagc
aacgtggagtcactatggggtcttcagcccagacctcctgcttccctgttgcacagccaa
gtccaagtccactccagaaaggagcggggcgagcgccggcctcaggcagtgaggagggga
gccccagactcaggggtcctgatccggctcaaggcccagatggctgaggtgcgcagtaag
atgacggatgtcaagtttcagctggaggcgcggggggaggccagggtagtaccctctggc
agagccacaggggaacaggggccctcttaccacgcagactcagacctagggcccagcaga
aagtccacagagctggatctgatggggaaaggacctggggcctccagacactgtcgttct
ggagggaagaaggccttgtctcccaagcaggagggcagcaggctgggcctgagaagagct
acagacggagtggagaaggagtcaagaagccagagcggtgaagagttgtccagtgatcaa
agcctcttccccagggacacccccaatggatcagaaggagccctgaagccacacagcgtg
cacagctcccctccttctctgggcagctcatcgtcatgctacgacagcaagccctgcatt
tccaaacacgaccaggagcagctctatggggctgacctgtacgctctggggggcctcaac
ggcatctccacctccaccatagcacgacccaggacccagcccatggggtctggcctgctg
acggacagctctctggactgtgacttggaggagacggctgaggtccgccaggcagaggga
ccctcatcacgccctgatgaaagtgagccgtactgctctaacccccctcttccttcacct
ctacctcgaccctcctctatggaggaatgctattgtgacggcagtcatcttgtccataag
cagacggtggtgctgctgccaggtatgagcagtgacagtgagatcgactgtgacacggag
aacgaagatgaggtggtagccctggaggctggagactgtcgctatgatgcccaggcactg
ccctgtgcaggggcccagttgaactctgacggcctgtgcttcaccacaggagagaacacc
gagaggtga
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