Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139418890
Help
Entry
139418890 CDS
T10872
Name
(RefSeq) beta-1,4-galactosyltransferase 1-like isoform X1
KO
K07966
beta-1,4-galactosyltransferase 1 [EC:
2.4.1.22
2.4.1.90
2.4.1.38
2.4.1.-]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla00052
Galactose metabolism
ocla00510
N-Glycan biosynthesis
ocla00513
Various types of N-glycan biosynthesis
ocla00514
Other types of O-glycan biosynthesis
ocla00515
Mannose type O-glycan biosynthesis
ocla00533
Glycosaminoglycan biosynthesis - keratan sulfate
ocla00601
Glycosphingolipid biosynthesis - lacto and neolacto series
ocla01100
Metabolic pathways
Module
ocla_M00071
Glycosphingolipid biosynthesis, neolacto-series, LacCer => nLc4Cer
ocla_M00075
N-glycan biosynthesis, complex type
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
139418890
09107 Glycan biosynthesis and metabolism
00510 N-Glycan biosynthesis
139418890
00513 Various types of N-glycan biosynthesis
139418890
00515 Mannose type O-glycan biosynthesis
139418890
00514 Other types of O-glycan biosynthesis
139418890
00533 Glycosaminoglycan biosynthesis - keratan sulfate
139418890
00601 Glycosphingolipid biosynthesis - lacto and neolacto series
139418890
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ocla01003
]
139418890
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139418890
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ocla04147
]
139418890
Enzymes [BR:
ocla01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.22 lactose synthase
139418890
2.4.1.38 beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase
139418890
2.4.1.90 N-acetyllactosamine synthase
139418890
Glycosyltransferases [BR:
ocla01003
]
Glycan extension
Type 2 chain/Poly-N-acetyllactosamine
139418890
Membrane trafficking [BR:
ocla04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
139418890
Exosome [BR:
ocla04147
]
Exosomal proteins
Exosomal proteins of breast milk
139418890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_7N
Glyco_transf_7C
Glyco_tranf_2_2
Motif
Other DBs
NCBI-GeneID:
139418890
NCBI-ProteinID:
XP_071024766
LinkDB
All DBs
Position
10:60829914..60837741
Genome browser
AA seq
359 aa
AA seq
DB search
MLKKIFCSLVLLCLLSFSVYFWYQLRYSNVTGSSRNALLSSLKDSQSEDGLIKSGVDYRG
IRLELDLGKENLTKENETTETKTQELKKCPDPSPLLVGPLRVEFSTPVSLDTVRKENPRL
QEGGRYKPHDCVALQKVALIIPFRLRDEHLKFWLYYLHPILQRQQLDYGVYVINQDGDNT
FNRAKLMNIGYAEALKEYDYDCFVFSDVDIIPMDDRNTYKCFRQPRHLSVSMDKYGFKLP
YNQYFGGVSSLSKEQIMKINGFPNNYWGWGGEDDDIFNRVDNRKMSISRPDGVVGKCRMI
RHERDKNNNDNPQRFKRIAHTLKTMDTDGLNSLEYEVVAVEKHDLFTKITVDVGMPPED
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaaaaaatattctgcagccttgtgcttttatgtctcttatctttctcagtatat
ttctggtatcagttgagatactcaaatgttactgggtcgagtaggaatgctttgctgtcc
agtttgaaggattcccaaagtgaagacggattaataaaatcaggagttgattatagaggt
atccgcttggagttagacttagggaaagaaaatctaacgaaggaaaatgaaactacagag
accaaaacccaagaattaaagaaatgcccagatccctctccacttctagtggggcctctc
agggttgagttctctacgcctgtcagcttggatacagtgaggaaggagaacccacgtctg
caggaaggaggtcgctacaaaccacatgactgtgtcgccctccaaaaggttgctctcatc
atccccttccgccttcgtgacgagcacctcaagttctggctctactacctccatcccatc
cttcagcgccaacagctggactatggcgtctatgttatcaatcaggatggagacaacacg
ttcaacagggccaagctgatgaacattggctatgctgaggccctgaaagagtatgactac
gactgctttgtgttcagtgacgtggacatcatccccatggatgaccgcaacacctacaaa
tgcttccgccagcccagacacctgtctgtctccatggacaagtatggcttcaagttgccc
tataatcagtactttggcggtgtctcatcgttgagtaaagagcagatcatgaaaatcaac
ggctttcccaacaactactggggctggggtggtgaagatgacgacattttcaacagggtg
gataacagaaaaatgtccatctctcgtccggacggcgtagtcggaaaatgccggatgatc
cgtcacgagagagacaaaaataacaacgacaatcctcagaggttcaagagaatagctcac
acgttaaagacgatggataccgatggcctcaactctctcgagtacgaagttgttgcagtt
gaaaagcatgacctgttcacaaagattacagtagacgtggggatgccacccgaagattaa
DBGET
integrated database retrieval system
